RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 RLBP1P12271 317 aa22■■□□□ 1.11
PNKP-225ENST00000636214 PI16Q6UXB8 463 aa22■■□□□ 1.11
PNKP-225ENST00000636214 PICK1Q9NRD5 415 aa22■■□□□ 1.11
PNKP-225ENST00000636214 ZNF112Q9UJU3 913 aa22■■□□□ 1.11
PNKP-225ENST00000636214 GPR75-ASB3A0A0A6YYF3 556 aa21.99■■□□□ 1.11
PNKP-225ENST00000636214 BTBD19C9JJ37 291 aa21.99■■□□□ 1.11
PNKP-225ENST00000636214 ZBTB7BO15156 539 aaPredicted RBP21.99■■□□□ 1.11
PNKP-225ENST00000636214 MAP4K4O95819 1239 aaPredicted RBP21.99■■□□□ 1.11
PNKP-225ENST00000636214 MCAMP43121 646 aa21.99■■□□□ 1.11
PNKP-225ENST00000636214 KIF22Q14807 665 aa21.99■■□□□ 1.11
PNKP-225ENST00000636214 NOL9Q5SY16 702 aaKnown RBP21.99■■□□□ 1.11
PNKP-225ENST00000636214 TBC1D9Q6ZT07 1266 aa21.99■■□□□ 1.11
PNKP-225ENST00000636214 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.99■■□□□ 1.11
PNKP-225ENST00000636214 ZFPM1Q8IX07 1006 aa21.98■■□□□ 1.11
PNKP-225ENST00000636214 NSUN4Q96CB9 384 aaKnown RBP21.98■■□□□ 1.11
PNKP-225ENST00000636214 DBNDD2Q9BQY9 259 aa21.97■■□□□ 1.11
PNKP-225ENST00000636214 RFX7Q2KHR2 1363 aa21.97■■□□□ 1.11
PNKP-225ENST00000636214 NAA16Q6N069 864 aaPredicted RBP21.96■■□□□ 1.11
PNKP-225ENST00000636214 SCYL3Q8IZE3 742 aa21.96■■□□□ 1.11
PNKP-225ENST00000636214 PANK1Q8TE04 598 aa21.96■■□□□ 1.11
PNKP-225ENST00000636214 DDX4Q9NQI0 724 aaKnown RBP21.96■■□□□ 1.11
PNKP-225ENST00000636214 SNRKQ9NRH2 765 aa21.96■■□□□ 1.11
PNKP-225ENST00000636214 PTPN22Q9Y2R2 807 aa21.96■■□□□ 1.11
PNKP-225ENST00000636214 NOP58Q9Y2X3 529 aaKnown RBP21.96■■□□□ 1.11
PNKP-225ENST00000636214 TLR2O60603 784 aa21.95■■□□□ 1.1
PNKP-225ENST00000636214 BAG3O95817 575 aa21.95■■□□□ 1.1
PNKP-225ENST00000636214 PLCG2P16885 1265 aa21.95■■□□□ 1.1
PNKP-225ENST00000636214 ANKRD23Q86SG2 305 aa21.95■■□□□ 1.1
PNKP-225ENST00000636214 ERC1Q8IUD2 1116 aa21.95■■□□□ 1.1
PNKP-225ENST00000636214 TEX11Q8IYF3 940 aa21.95■■□□□ 1.1
PNKP-225ENST00000636214 KCNH4Q9UQ05 1017 aa21.95■■□□□ 1.1
PNKP-225ENST00000636214 DDTLA6NHG4 134 aaPredicted RBP21.94■■□□□ 1.1
PNKP-225ENST00000636214 NPM3O75607 178 aaKnown RBP21.94■■□□□ 1.1
PNKP-225ENST00000636214 RHBDL3P58872 404 aa21.94■■□□□ 1.1
PNKP-225ENST00000636214 HSP90AB4PQ58FF6 505 aa21.94■■□□□ 1.1
PNKP-225ENST00000636214 CEP85Q6P2H3 762 aa21.94■■□□□ 1.1
PNKP-225ENST00000636214 PDHXO00330 501 aa21.93■■□□□ 1.1
PNKP-225ENST00000636214 CXCL11O14625 94 aa21.93■■□□□ 1.1
PNKP-225ENST00000636214 ATRNL1Q5VV63 1379 aa21.93■■□□□ 1.1
PNKP-225ENST00000636214 MAST2Q6P0Q8 1798 aa21.93■■□□□ 1.1
PNKP-225ENST00000636214 CCDC8Q9H0W5 538 aaPredicted RBP21.93■■□□□ 1.1
PNKP-225ENST00000636214 CHMP4BQ9H444 224 aaKnown RBP21.93■■□□□ 1.1
PNKP-225ENST00000636214 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.93■■□□□ 1.1
PNKP-225ENST00000636214 ZHX2Q9Y6X8 837 aa21.93■■□□□ 1.1
PNKP-225ENST00000636214 PHF20L1A8MW92 1017 aa21.92■■□□□ 1.1
PNKP-225ENST00000636214 CTNND1O60716 968 aaKnown RBP21.92■■□□□ 1.1
PNKP-225ENST00000636214 IGSF3O75054 1194 aa21.92■■□□□ 1.1
PNKP-225ENST00000636214 SH3BP5LQ7L8J4 393 aa21.92■■□□□ 1.1
PNKP-225ENST00000636214 FASTKD5Q7L8L6 764 aaKnown RBP21.92■■□□□ 1.1
PNKP-225ENST00000636214 ZNF384Q8TF68 577 aa21.92■■□□□ 1.1
PNKP-225ENST00000636214 PARK7Q99497 189 aaKnown RBP21.92■■□□□ 1.1
PNKP-225ENST00000636214 KIAA0100Q14667 2235 aaKnown RBP21.92■■□□□ 1.1
PNKP-225ENST00000636214 PTPRAP18433 802 aa21.91■■□□□ 1.1
PNKP-225ENST00000636214 ZNF512BQ96KM6 892 aaPredicted RBP21.91■■□□□ 1.1
PNKP-225ENST00000636214 OSBPL5Q9H0X9 879 aaPredicted RBP21.91■■□□□ 1.1
PNKP-225ENST00000636214 AATFQ9NY61 560 aaKnown RBP eCLIP21.91■■□□□ 1.1
PNKP-225ENST00000636214 DBNLQ9UJU6 430 aaKnown RBP21.91■■□□□ 1.1
PNKP-225ENST00000636214 DDX19BQ9UMR2 479 aa21.91■■□□□ 1.1
PNKP-225ENST00000636214 EXOC6BQ9Y2D4 811 aa21.91■■□□□ 1.1
PNKP-225ENST00000636214 DOCK1Q14185 1865 aa21.91■■□□□ 1.1
PNKP-225ENST00000636214 TBC1D12O60347 775 aa21.9■■□□□ 1.1
PNKP-225ENST00000636214 HMMRO75330 724 aa21.9■■□□□ 1.1
PNKP-225ENST00000636214 GADL1Q6ZQY3 521 aa21.9■■□□□ 1.1
PNKP-225ENST00000636214 NBPF11Q86T75 865 aa21.9■■□□□ 1.1
PNKP-225ENST00000636214 TRIM34Q9BYJ4 488 aa21.9■■□□□ 1.1
PNKP-225ENST00000636214 COL2A1P02458 1487 aaPredicted RBP21.9■■□□□ 1.1
PNKP-225ENST00000636214 GNRH1P01148 92 aa21.89■■□□□ 1.09
PNKP-225ENST00000636214 ZAP70P43403 619 aa21.89■■□□□ 1.09
PNKP-225ENST00000636214 LACTBP83111 547 aaPredicted RBP21.89■■□□□ 1.09
PNKP-225ENST00000636214 MAP3K10Q02779 954 aa21.89■■□□□ 1.09
PNKP-225ENST00000636214 SLC9C1Q4G0N8 1177 aa21.89■■□□□ 1.09
PNKP-225ENST00000636214 AACSQ86V21 672 aa21.89■■□□□ 1.09
PNKP-225ENST00000636214 CYP2E1P05181 493 aaPredicted RBP21.88■■□□□ 1.09
PNKP-225ENST00000636214 SH3RF3Q8TEJ3 882 aaPredicted RBP21.88■■□□□ 1.09
PNKP-225ENST00000636214 EAF2Q96CJ1 260 aaPredicted RBP21.88■■□□□ 1.09
PNKP-225ENST00000636214 DHX36Q9H2U1 1008 aaKnown RBP21.88■■□□□ 1.09
PNKP-225ENST00000636214 TLR7Q9NYK1 1049 aaKnown RBP21.88■■□□□ 1.09
PNKP-225ENST00000636214 CPA4Q9UI42 421 aa21.88■■□□□ 1.09
PNKP-225ENST00000636214 RCAN3Q9UKA8 241 aa21.88■■□□□ 1.09
PNKP-225ENST00000636214 HTTP42858 3142 aa21.87■■□□□ 1.09
PNKP-225ENST00000636214 A0A0G2JLL6 359 aaPredicted RBP21.87■■□□□ 1.09
PNKP-225ENST00000636214 TRIM75PA6NK02 468 aa21.87■■□□□ 1.09
PNKP-225ENST00000636214 IDH1O75874 414 aaKnown RBP21.87■■□□□ 1.09
PNKP-225ENST00000636214 PRMT2P55345 433 aa21.87■■□□□ 1.09
PNKP-225ENST00000636214 PRRT2Q7Z6L0 340 aaPredicted RBP21.87■■□□□ 1.09
PNKP-225ENST00000636214 TMEM106CQ9BVX2 250 aa21.87■■□□□ 1.09
PNKP-225ENST00000636214 HERC5Q9UII4 1024 aaKnown RBP21.87■■□□□ 1.09
PNKP-225ENST00000636214 PTCH2Q9Y6C5 1203 aa21.87■■□□□ 1.09
PNKP-225ENST00000636214 ECM2O94769 699 aaPredicted RBP21.86■■□□□ 1.09
PNKP-225ENST00000636214 HOXD10P28358 340 aa21.86■■□□□ 1.09
PNKP-225ENST00000636214 C17orf99Q6UX52 265 aa21.86■■□□□ 1.09
PNKP-225ENST00000636214 CERS3Q8IU89 383 aa21.86■■□□□ 1.09
PNKP-225ENST00000636214 RPAP2Q8IXW5 612 aaPredicted RBP21.86■■□□□ 1.09
PNKP-225ENST00000636214 ARMC5Q96C12 935 aa21.86■■□□□ 1.09
PNKP-225ENST00000636214 PI4KBQ9UBF8 816 aa21.86■■□□□ 1.09
PNKP-225ENST00000636214 COG6Q9Y2V7 657 aa21.86■■□□□ 1.09
PNKP-225ENST00000636214 AFG3L2Q9Y4W6 797 aa21.86■■□□□ 1.09
PNKP-225ENST00000636214 FAM196BA6NMK8 535 aa21.85■■□□□ 1.09
PNKP-225ENST00000636214 APBB1O00213 710 aa21.85■■□□□ 1.09
PNKP-225ENST00000636214 FMNL1O95466 1100 aaPredicted RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms