RNA–Protein interactions for RNA: ENST00000635886.1

C11orf53-202, Transcript of chromosome 11 open reading frame 53, humanhuman

TSL 5

Gene C11orf53, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf53-202ENST00000635886 TEX11Q8IYF3 940 aa16.37■□□□□ 0.21
C11orf53-202ENST00000635886 SH3RF3Q8TEJ3 882 aaPredicted RBP16.37■□□□□ 0.21
C11orf53-202ENST00000635886 CNKSR2Q8WXI2 1034 aa16.37■□□□□ 0.21
C11orf53-202ENST00000635886 OPTNQ96CV9 577 aa16.37■□□□□ 0.21
C11orf53-202ENST00000635886 NOL10Q9BSC4 688 aaKnown RBP16.37■□□□□ 0.21
C11orf53-202ENST00000635886 CSADQ9Y600 493 aa16.37■□□□□ 0.21
C11orf53-202ENST00000635886 ATRNL1Q5VV63 1379 aa16.37■□□□□ 0.21
C11orf53-202ENST00000635886 DDTLA6NHG4 134 aaPredicted RBP16.36■□□□□ 0.21
C11orf53-202ENST00000635886 MANSC4A6NHS7 340 aaPredicted RBP16.36■□□□□ 0.21
C11orf53-202ENST00000635886 NPM3O75607 178 aaKnown RBP16.36■□□□□ 0.21
C11orf53-202ENST00000635886 BAG3O95817 575 aa16.36■□□□□ 0.21
C11orf53-202ENST00000635886 CYP7A1P22680 504 aa16.36■□□□□ 0.21
C11orf53-202ENST00000635886 PPP4CP60510 307 aa16.36■□□□□ 0.21
C11orf53-202ENST00000635886 SREBF2Q12772 1141 aa16.36■□□□□ 0.21
C11orf53-202ENST00000635886 MAGEB6Q8N7X4 407 aa16.36■□□□□ 0.21
C11orf53-202ENST00000635886 ZKSCAN4Q969J2 545 aaPredicted RBP16.36■□□□□ 0.21
C11orf53-202ENST00000635886 DNAJC2Q99543 621 aaKnown RBP16.36■□□□□ 0.21
C11orf53-202ENST00000635886 SNCAIPQ9Y6H5 919 aa16.36■□□□□ 0.21
C11orf53-202ENST00000635886 AK9Q5TCS8 1911 aa16.35■□□□□ 0.21
C11orf53-202ENST00000635886 GOLIM4O00461 696 aa16.35■□□□□ 0.21
C11orf53-202ENST00000635886 ATP5JP18859 108 aa16.35■□□□□ 0.21
C11orf53-202ENST00000635886 INPP5BP32019 993 aa16.35■□□□□ 0.21
C11orf53-202ENST00000635886 MAP3K12Q12852 859 aa16.35■□□□□ 0.21
C11orf53-202ENST00000635886 TTF1Q15361 905 aaPredicted RBP16.35■□□□□ 0.21
C11orf53-202ENST00000635886 EDC3Q96F86 508 aaKnown RBP16.35■□□□□ 0.21
C11orf53-202ENST00000635886 BOLA2Q9H3K6 86 aa16.35■□□□□ 0.21
C11orf53-202ENST00000635886 ZNF112Q9UJU3 913 aa16.35■□□□□ 0.21
C11orf53-202ENST00000635886 DOCK2Q92608 1830 aa16.34■□□□□ 0.21
C11orf53-202ENST00000635886 SPDYE5A6NIY4 337 aa16.34■□□□□ 0.21
C11orf53-202ENST00000635886 SLURP2P0DP57 97 aa16.34■□□□□ 0.21
C11orf53-202ENST00000635886 PLCG2P16885 1265 aa16.34■□□□□ 0.21
C11orf53-202ENST00000635886 DYNLL1P63167 89 aaKnown RBP16.34■□□□□ 0.21
C11orf53-202ENST00000635886 MIGA1Q8NAN2 632 aa16.34■□□□□ 0.21
C11orf53-202ENST00000635886 OTUD5Q96G74 571 aa16.34■□□□□ 0.21
C11orf53-202ENST00000635886 OSBPL5Q9H0X9 879 aaPredicted RBP16.34■□□□□ 0.21
C11orf53-202ENST00000635886 INHBEP58166 350 aa16.33■□□□□ 0.2
C11orf53-202ENST00000635886 TNS4Q8IZW8 715 aa16.33■□□□□ 0.2
C11orf53-202ENST00000635886 TGFBRAP1Q8WUH2 860 aa16.33■□□□□ 0.2
C11orf53-202ENST00000635886 HAUS7Q99871 368 aa16.33■□□□□ 0.2
C11orf53-202ENST00000635886 SUPT16HQ9Y5B9 1047 aaKnown RBP16.33■□□□□ 0.2
C11orf53-202ENST00000635886 COL2A1P02458 1487 aaPredicted RBP16.32■□□□□ 0.2
C11orf53-202ENST00000635886 PDE6AP16499 860 aa16.32■□□□□ 0.2
C11orf53-202ENST00000635886 MAP3K10Q02779 954 aa16.32■□□□□ 0.2
C11orf53-202ENST00000635886 TMED8Q6PL24 325 aaPredicted RBP16.32■□□□□ 0.2
C11orf53-202ENST00000635886 ERO1BQ86YB8 467 aa16.32■□□□□ 0.2
C11orf53-202ENST00000635886 IFNL1Q8IU54 200 aa16.32■□□□□ 0.2
C11orf53-202ENST00000635886 MAPKAPK5Q8IW41 473 aa16.32■□□□□ 0.2
C11orf53-202ENST00000635886 ECHDC1Q9NTX5 307 aa16.32■□□□□ 0.2
C11orf53-202ENST00000635886 PAG1Q9NWQ8 432 aa16.32■□□□□ 0.2
C11orf53-202ENST00000635886 FLT1P17948 1338 aa16.31■□□□□ 0.2
C11orf53-202ENST00000635886 TESPA1A2RU30 521 aaPredicted RBP16.31■□□□□ 0.2
C11orf53-202ENST00000635886 PHF20L1A8MW92 1017 aa16.31■□□□□ 0.2
C11orf53-202ENST00000635886 IGF2BP3O00425 579 aaKnown RBP eCLIP16.31■□□□□ 0.2
C11orf53-202ENST00000635886 TBC1D8O95759 1140 aa16.31■□□□□ 0.2
C11orf53-202ENST00000635886 NOL9Q5SY16 702 aaKnown RBP16.31■□□□□ 0.2
C11orf53-202ENST00000635886 SLC9C2Q5TAH2 1124 aa16.31■□□□□ 0.2
C11orf53-202ENST00000635886 EXOC6Q8TAG9 804 aa16.31■□□□□ 0.2
C11orf53-202ENST00000635886 MS4A4AQ96JQ5 239 aa16.31■□□□□ 0.2
C11orf53-202ENST00000635886 LAMB1P07942 1786 aa16.31■□□□□ 0.2
C11orf53-202ENST00000635886 ZNF532Q9HCE3 1301 aa16.3■□□□□ 0.2
C11orf53-202ENST00000635886 FAM196BA6NMK8 535 aa16.3■□□□□ 0.2
C11orf53-202ENST00000635886 IRF6O14896 467 aa16.3■□□□□ 0.2
C11orf53-202ENST00000635886 PPIL2Q13356 520 aa16.3■□□□□ 0.2
C11orf53-202ENST00000635886 HDAC1Q13547 482 aaPredicted RBP16.3■□□□□ 0.2
C11orf53-202ENST00000635886 AAMPQ13685 434 aa16.3■□□□□ 0.2
C11orf53-202ENST00000635886 TSHZ3Q63HK5 1081 aa16.3■□□□□ 0.2
C11orf53-202ENST00000635886 PTPN18Q99952 460 aa16.3■□□□□ 0.2
C11orf53-202ENST00000635886 CCL15-CCL14A0A0B4J2E2 113 aa16.29■□□□□ 0.2
C11orf53-202ENST00000635886 TCRBV5S4A2TA0A5A2 114 aa16.29■□□□□ 0.2
C11orf53-202ENST00000635886 TBC1D12O60347 775 aa16.29■□□□□ 0.2
C11orf53-202ENST00000635886 ALDH1A1P00352 501 aa16.29■□□□□ 0.2
C11orf53-202ENST00000635886 GTF2A2P52657 109 aa16.29■□□□□ 0.2
C11orf53-202ENST00000635886 PPATQ06203 517 aa16.29■□□□□ 0.2
C11orf53-202ENST00000635886 CCL15Q16663 113 aa16.29■□□□□ 0.2
C11orf53-202ENST00000635886 CERS3Q8IU89 383 aa16.29■□□□□ 0.2
C11orf53-202ENST00000635886 OTUD7AQ8TE49 926 aaPredicted RBP16.29■□□□□ 0.2
C11orf53-202ENST00000635886 BRI3BPQ8WY22 251 aa16.29■□□□□ 0.2
C11orf53-202ENST00000635886 GPATCH3Q96I76 525 aa16.29■□□□□ 0.2
C11orf53-202ENST00000635886 RIOK1Q9BRS2 568 aaKnown RBP16.29■□□□□ 0.2
C11orf53-202ENST00000635886 R3HDMLQ9H3Y0 253 aa16.29■□□□□ 0.2
C11orf53-202ENST00000635886 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.29■□□□□ 0.2
C11orf53-202ENST00000635886 CASP8AP2Q9UKL3 1982 aa16.29■□□□□ 0.2
C11orf53-202ENST00000635886 CDK5RAP2Q96SN8 1893 aa16.29■□□□□ 0.2
C11orf53-202ENST00000635886 MAGEB6P1A0A0J9YX57 407 aa16.28■□□□□ 0.2
C11orf53-202ENST00000635886 ADD2P35612 726 aa16.28■□□□□ 0.2
C11orf53-202ENST00000635886 SLFNL1Q499Z3 407 aa16.28■□□□□ 0.2
C11orf53-202ENST00000635886 SCYL3Q8IZE3 742 aa16.28■□□□□ 0.2
C11orf53-202ENST00000635886 CFHR5Q9BXR6 569 aa16.28■□□□□ 0.2
C11orf53-202ENST00000635886 DHX36Q9H2U1 1008 aaKnown RBP16.28■□□□□ 0.2
C11orf53-202ENST00000635886 PI4KBQ9UBF8 816 aa16.28■□□□□ 0.2
C11orf53-202ENST00000635886 SAP30BPQ9UHR5 308 aaKnown RBP16.28■□□□□ 0.2
C11orf53-202ENST00000635886 PALD1Q9ULE6 856 aa16.28■□□□□ 0.2
C11orf53-202ENST00000635886 FOCADQ5VW36 1801 aa16.27■□□□□ 0.2
C11orf53-202ENST00000635886 CTNND1O60716 968 aaKnown RBP16.27■□□□□ 0.2
C11orf53-202ENST00000635886 CHGBP05060 677 aa16.27■□□□□ 0.2
C11orf53-202ENST00000635886 USP5P45974 858 aa16.27■□□□□ 0.2
C11orf53-202ENST00000635886 SNAPC2Q13487 334 aa16.27■□□□□ 0.2
C11orf53-202ENST00000635886 ANKRD45Q5TZF3 282 aa16.27■□□□□ 0.2
C11orf53-202ENST00000635886 OTUD7BQ6GQQ9 843 aa16.27■□□□□ 0.2
C11orf53-202ENST00000635886 GCC1Q96CN9 775 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms