RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 RGMBQ6NW40 437 aa11.78□□□□□ -0.52
LINC00339-210ENST00000635675 SH3BP5LQ7L8J4 393 aa11.78□□□□□ -0.52
LINC00339-210ENST00000635675 ARMC9Q7Z3E5 817 aa11.78□□□□□ -0.52
LINC00339-210ENST00000635675 CERS3Q8IU89 383 aa11.78□□□□□ -0.52
LINC00339-210ENST00000635675 CAPNS2Q96L46 248 aa11.78□□□□□ -0.52
LINC00339-210ENST00000635675 RIOK1Q9BRS2 568 aaKnown RBP11.78□□□□□ -0.52
LINC00339-210ENST00000635675 OSBPL3Q9H4L5 887 aa11.78□□□□□ -0.52
LINC00339-210ENST00000635675 ANGEL1Q9UNK9 670 aaKnown RBP11.78□□□□□ -0.52
LINC00339-210ENST00000635675 WDR33Q9C0J8 1336 aaKnown RBP11.78□□□□□ -0.52
LINC00339-210ENST00000635675 MAGEB6P1A0A0J9YX57 407 aa11.77□□□□□ -0.52
LINC00339-210ENST00000635675 UNCXA6NJT0 531 aa11.77□□□□□ -0.52
LINC00339-210ENST00000635675 ZSCAN25Q6NSZ9 544 aa11.77□□□□□ -0.52
LINC00339-210ENST00000635675 JMYQ8N9B5 988 aa11.77□□□□□ -0.52
LINC00339-210ENST00000635675 HOOK2Q96ED9 719 aa11.77□□□□□ -0.52
LINC00339-210ENST00000635675 ATRNL1Q5VV63 1379 aa11.77□□□□□ -0.52
LINC00339-210ENST00000635675 CDK5RAP2Q96SN8 1893 aa11.77□□□□□ -0.52
LINC00339-210ENST00000635675 MYH7P12883 1935 aa11.77□□□□□ -0.53
LINC00339-210ENST00000635675 AK9Q5TCS8 1911 aa11.77□□□□□ -0.53
LINC00339-210ENST00000635675 DDTLA6NHG4 134 aaPredicted RBP11.77□□□□□ -0.53
LINC00339-210ENST00000635675 FAM155AB1AL88 458 aaPredicted RBP11.77□□□□□ -0.53
LINC00339-210ENST00000635675 ECE1P42892 770 aa11.77□□□□□ -0.53
LINC00339-210ENST00000635675 IREB2P48200 963 aaKnown RBP11.77□□□□□ -0.53
LINC00339-210ENST00000635675 ZNF157P51786 506 aaPredicted RBP11.77□□□□□ -0.53
LINC00339-210ENST00000635675 MAP3K10Q02779 954 aa11.77□□□□□ -0.53
LINC00339-210ENST00000635675 TGFBRAP1Q8WUH2 860 aa11.77□□□□□ -0.53
LINC00339-210ENST00000635675 CCDC102AQ96A19 550 aa11.77□□□□□ -0.53
LINC00339-210ENST00000635675 OSBPL5Q9H0X9 879 aaPredicted RBP11.77□□□□□ -0.53
LINC00339-210ENST00000635675 COL2A1P02458 1487 aaPredicted RBP11.76□□□□□ -0.53
LINC00339-210ENST00000635675 FOCADQ5VW36 1801 aa11.76□□□□□ -0.53
LINC00339-210ENST00000635675 RNF113AO15541 343 aaKnown RBP11.76□□□□□ -0.53
LINC00339-210ENST00000635675 PDE4AP27815 886 aa11.76□□□□□ -0.53
LINC00339-210ENST00000635675 MAPK8IP2Q13387 824 aaPredicted RBP11.76□□□□□ -0.53
LINC00339-210ENST00000635675 DCAF15Q66K64 600 aa11.76□□□□□ -0.53
LINC00339-210ENST00000635675 PAXIP1Q6ZW49 1069 aaPredicted RBP11.76□□□□□ -0.53
LINC00339-210ENST00000635675 MIGA2Q7L4E1 593 aa11.76□□□□□ -0.53
LINC00339-210ENST00000635675 MAPKAPK5Q8IW41 473 aa11.76□□□□□ -0.53
LINC00339-210ENST00000635675 ZSCAN29Q8IWY8 852 aaPredicted RBP11.76□□□□□ -0.53
LINC00339-210ENST00000635675 CSRNP1Q96S65 589 aa11.76□□□□□ -0.53
LINC00339-210ENST00000635675 FLT1P17948 1338 aa11.75□□□□□ -0.53
LINC00339-210ENST00000635675 ZFYP08048 801 aaPredicted RBP11.75□□□□□ -0.53
LINC00339-210ENST00000635675 MAP2K2P36507 400 aa11.75□□□□□ -0.53
LINC00339-210ENST00000635675 MAP3K9P80192 1104 aa11.75□□□□□ -0.53
LINC00339-210ENST00000635675 GRM1Q13255 1194 aa11.75□□□□□ -0.53
LINC00339-210ENST00000635675 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.75□□□□□ -0.53
LINC00339-210ENST00000635675 RASAL3Q86YV0 1011 aa11.75□□□□□ -0.53
LINC00339-210ENST00000635675 ANKRD13AQ8IZ07 590 aa11.75□□□□□ -0.53
LINC00339-210ENST00000635675 LCORLQ8N3X6 602 aa11.75□□□□□ -0.53
LINC00339-210ENST00000635675 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.75□□□□□ -0.534e-7■■■■■ 38.1
LINC00339-210ENST00000635675 EVI5LQ96CN4 794 aa11.75□□□□□ -0.53
LINC00339-210ENST00000635675 CLMNQ96JQ2 1002 aa11.75□□□□□ -0.53
LINC00339-210ENST00000635675 PUS7LQ9H0K6 701 aaKnown RBP11.75□□□□□ -0.53
LINC00339-210ENST00000635675 DHX36Q9H2U1 1008 aaKnown RBP11.75□□□□□ -0.53
LINC00339-210ENST00000635675 ARMT1Q9H993 441 aa11.75□□□□□ -0.53
LINC00339-210ENST00000635675 ZNF112Q9UJU3 913 aa11.75□□□□□ -0.53
LINC00339-210ENST00000635675 PHF20L1A8MW92 1017 aa11.74□□□□□ -0.53
LINC00339-210ENST00000635675 TBC1D12O60347 775 aa11.74□□□□□ -0.53
LINC00339-210ENST00000635675 AOC2O75106 756 aa11.74□□□□□ -0.53
LINC00339-210ENST00000635675 MBD4O95243 580 aa11.74□□□□□ -0.53
LINC00339-210ENST00000635675 SLC10A3P09131 477 aa11.74□□□□□ -0.53
LINC00339-210ENST00000635675 NOGQ13253 232 aa11.74□□□□□ -0.53
LINC00339-210ENST00000635675 LRRFIP1Q32MZ4 808 aaKnown RBP11.74□□□□□ -0.53
LINC00339-210ENST00000635675 CENPQQ7L2Z9 268 aaPredicted RBP11.74□□□□□ -0.53
LINC00339-210ENST00000635675 APPBP2Q92624 585 aa11.74□□□□□ -0.53
LINC00339-210ENST00000635675 OSBP2Q969R2 916 aa11.74□□□□□ -0.53
LINC00339-210ENST00000635675 SLC10A4Q96EP9 437 aa11.74□□□□□ -0.53
LINC00339-210ENST00000635675 ZIC5Q96T25 663 aa11.74□□□□□ -0.53
LINC00339-210ENST00000635675 FSD1Q9BTV5 496 aa11.74□□□□□ -0.53
LINC00339-210ENST00000635675 ZNF341Q9BYN7 854 aa11.74□□□□□ -0.53
LINC00339-210ENST00000635675 CRNKL1Q9BZJ0 848 aaKnown RBP11.74□□□□□ -0.53
LINC00339-210ENST00000635675 PALD1Q9ULE6 856 aa11.74□□□□□ -0.53
LINC00339-210ENST00000635675 OTOFQ9HC10 1997 aa11.73□□□□□ -0.53
LINC00339-210ENST00000635675 SLURP2P0DP57 97 aa11.73□□□□□ -0.53
LINC00339-210ENST00000635675 USP5P45974 858 aa11.73□□□□□ -0.53
LINC00339-210ENST00000635675 TICAM2Q86XR7 235 aa11.73□□□□□ -0.53
LINC00339-210ENST00000635675 ZKSCAN4Q969J2 545 aaPredicted RBP11.73□□□□□ -0.53
LINC00339-210ENST00000635675 WRNIP1Q96S55 665 aa11.73□□□□□ -0.53
LINC00339-210ENST00000635675 STRBPQ96SI9 672 aaKnown RBP11.73□□□□□ -0.53
LINC00339-210ENST00000635675 PI4KBQ9UBF8 816 aa11.73□□□□□ -0.53
LINC00339-210ENST00000635675 THSD7BQ9C0I4 1608 aa11.72□□□□□ -0.53
LINC00339-210ENST00000635675 PRKAB2O43741 272 aa11.72□□□□□ -0.53
LINC00339-210ENST00000635675 INPP5BP32019 993 aa11.72□□□□□ -0.53
LINC00339-210ENST00000635675 VGLL4Q14135 290 aa11.72□□□□□ -0.53
LINC00339-210ENST00000635675 ZMYM1Q5SVZ6 1142 aa11.72□□□□□ -0.53
LINC00339-210ENST00000635675 ERICH6BQ5W0A0 696 aa11.72□□□□□ -0.53
LINC00339-210ENST00000635675 SPRYD7Q5W111 196 aa11.72□□□□□ -0.53
LINC00339-210ENST00000635675 METTL16Q86W50 562 aaKnown RBP11.72□□□□□ -0.53
LINC00339-210ENST00000635675 FOXP4Q8IVH2 680 aaPredicted RBP11.72□□□□□ -0.53
LINC00339-210ENST00000635675 SDR42E1Q8WUS8 393 aa11.72□□□□□ -0.53
LINC00339-210ENST00000635675 AIDAQ96BJ3 306 aa11.72□□□□□ -0.53
LINC00339-210ENST00000635675 CCDC136Q96JN2 1154 aa11.72□□□□□ -0.53
LINC00339-210ENST00000635675 DCP1AQ9NPI6 582 aaPredicted RBP11.72□□□□□ -0.53
LINC00339-210ENST00000635675 SAP30BPQ9UHR5 308 aaKnown RBP11.72□□□□□ -0.53
LINC00339-210ENST00000635675 CSADQ9Y600 493 aa11.72□□□□□ -0.53
LINC00339-210ENST00000635675 MYH1P12882 1939 aa11.72□□□□□ -0.53
LINC00339-210ENST00000635675 TRIM6-TRIM34B2RNG4 842 aa11.71□□□□□ -0.53
LINC00339-210ENST00000635675 M0R2C6 588 aa11.71□□□□□ -0.53
LINC00339-210ENST00000635675 KIF23Q02241 960 aaPredicted RBP11.71□□□□□ -0.53
LINC00339-210ENST00000635675 WNK4Q96J92 1243 aa11.71□□□□□ -0.53
LINC00339-210ENST00000635675 ELP3Q9H9T3 547 aa11.71□□□□□ -0.53
LINC00339-210ENST00000635675 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms