RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 OSBPL3Q9H4L5 887 aa17.84■□□□□ 0.45
CDC42BPB-209ENST00000634889 ANGEL1Q9UNK9 670 aaKnown RBP17.84■□□□□ 0.45
CDC42BPB-209ENST00000634889 WDR33Q9C0J8 1336 aaKnown RBP17.83■□□□□ 0.44
CDC42BPB-209ENST00000634889 OTOFQ9HC10 1997 aa17.83■□□□□ 0.44
CDC42BPB-209ENST00000634889 AK9Q5TCS8 1911 aa17.83■□□□□ 0.44
CDC42BPB-209ENST00000634889 MAGEB6P1A0A0J9YX57 407 aa17.83■□□□□ 0.44
CDC42BPB-209ENST00000634889 ZFYP08048 801 aaPredicted RBP17.83■□□□□ 0.44
CDC42BPB-209ENST00000634889 IREB2P48200 963 aaKnown RBP17.83■□□□□ 0.44
CDC42BPB-209ENST00000634889 VEGFBP49765 207 aa17.83■□□□□ 0.44
CDC42BPB-209ENST00000634889 PRKG1Q13976 671 aa17.83■□□□□ 0.44
CDC42BPB-209ENST00000634889 DCAF15Q66K64 600 aa17.83■□□□□ 0.44
CDC42BPB-209ENST00000634889 PAXIP1Q6ZW49 1069 aaPredicted RBP17.83■□□□□ 0.44
CDC42BPB-209ENST00000634889 JMYQ8N9B5 988 aa17.83■□□□□ 0.44
CDC42BPB-209ENST00000634889 CCDC102AQ96A19 550 aa17.83■□□□□ 0.44
CDC42BPB-209ENST00000634889 CAPNS2Q96L46 248 aa17.83■□□□□ 0.44
CDC42BPB-209ENST00000634889 RIOK1Q9BRS2 568 aaKnown RBP17.83■□□□□ 0.44
CDC42BPB-209ENST00000634889 OSBPL5Q9H0X9 879 aaPredicted RBP17.83■□□□□ 0.44
CDC42BPB-209ENST00000634889 UBE2Q2LH0YL09 131 aa17.82■□□□□ 0.44
CDC42BPB-209ENST00000634889 USP2O75604 605 aaPredicted RBP17.82■□□□□ 0.44
CDC42BPB-209ENST00000634889 ZNF157P51786 506 aaPredicted RBP17.82■□□□□ 0.44
CDC42BPB-209ENST00000634889 DYNLL1P63167 89 aaKnown RBP17.82■□□□□ 0.44
CDC42BPB-209ENST00000634889 CYP4F22Q6NT55 531 aa17.82■□□□□ 0.44
CDC42BPB-209ENST00000634889 PLEKHM2Q8IWE5 1019 aa17.82■□□□□ 0.44
CDC42BPB-209ENST00000634889 ZSCAN29Q8IWY8 852 aaPredicted RBP17.82■□□□□ 0.44
CDC42BPB-209ENST00000634889 ZFPM1Q8IX07 1006 aa17.82■□□□□ 0.44
CDC42BPB-209ENST00000634889 CSRNP1Q96S65 589 aa17.82■□□□□ 0.44
CDC42BPB-209ENST00000634889 FLT1P17948 1338 aa17.81■□□□□ 0.44
CDC42BPB-209ENST00000634889 SLC10A3P09131 477 aa17.81■□□□□ 0.44
CDC42BPB-209ENST00000634889 TICAM2Q86XR7 235 aa17.81■□□□□ 0.44
CDC42BPB-209ENST00000634889 ANKRD13AQ8IZ07 590 aa17.81■□□□□ 0.44
CDC42BPB-209ENST00000634889 TGFBRAP1Q8WUH2 860 aa17.81■□□□□ 0.44
CDC42BPB-209ENST00000634889 EVI5LQ96CN4 794 aa17.81■□□□□ 0.44
CDC42BPB-209ENST00000634889 DHX36Q9H2U1 1008 aaKnown RBP17.81■□□□□ 0.44
CDC42BPB-209ENST00000634889 FZD1Q9UP38 647 aa17.81■□□□□ 0.44
CDC42BPB-209ENST00000634889 DDTLA6NHG4 134 aaPredicted RBP17.8■□□□□ 0.44
CDC42BPB-209ENST00000634889 NOGQ13253 232 aa17.8■□□□□ 0.44
CDC42BPB-209ENST00000634889 CENPQQ7L2Z9 268 aaPredicted RBP17.8■□□□□ 0.44
CDC42BPB-209ENST00000634889 SH3BP5LQ7L8J4 393 aa17.8■□□□□ 0.44
CDC42BPB-209ENST00000634889 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.8■□□□□ 0.44
CDC42BPB-209ENST00000634889 FSD1Q9BTV5 496 aa17.8■□□□□ 0.44
CDC42BPB-209ENST00000634889 ZNF341Q9BYN7 854 aa17.8■□□□□ 0.44
CDC42BPB-209ENST00000634889 DDX60LQ5H9U9 1706 aaKnown RBP17.8■□□□□ 0.44
CDC42BPB-209ENST00000634889 FAM155AB1AL88 458 aaPredicted RBP17.79■□□□□ 0.44
CDC42BPB-209ENST00000634889 RNF113AO15541 343 aaKnown RBP17.79■□□□□ 0.44
CDC42BPB-209ENST00000634889 MAP2K2P36507 400 aa17.79■□□□□ 0.44
CDC42BPB-209ENST00000634889 USP5P45974 858 aa17.79■□□□□ 0.44
CDC42BPB-209ENST00000634889 MAP3K10Q02779 954 aa17.79■□□□□ 0.44
CDC42BPB-209ENST00000634889 RASAL3Q86YV0 1011 aa17.79■□□□□ 0.44
CDC42BPB-209ENST00000634889 APPBP2Q92624 585 aa17.79■□□□□ 0.44
CDC42BPB-209ENST00000634889 CRNKL1Q9BZJ0 848 aaKnown RBP17.79■□□□□ 0.44
CDC42BPB-209ENST00000634889 NAV1Q8NEY1 1877 aa17.78■□□□□ 0.44
CDC42BPB-209ENST00000634889 GRM1Q13255 1194 aa17.78■□□□□ 0.44
CDC42BPB-209ENST00000634889 MIGA2Q7L4E1 593 aa17.78■□□□□ 0.44
CDC42BPB-209ENST00000634889 MAPKAPK5Q8IW41 473 aa17.78■□□□□ 0.44
CDC42BPB-209ENST00000634889 AIDAQ96BJ3 306 aa17.78■□□□□ 0.44
CDC42BPB-209ENST00000634889 WRNIP1Q96S55 665 aa17.78■□□□□ 0.44
CDC42BPB-209ENST00000634889 LAMB1P07942 1786 aa17.78■□□□□ 0.44
CDC42BPB-209ENST00000634889 MYH1P12882 1939 aa17.78■□□□□ 0.44
CDC42BPB-209ENST00000634889 TBC1D12O60347 775 aa17.77■□□□□ 0.44
CDC42BPB-209ENST00000634889 MBD4O95243 580 aa17.77■□□□□ 0.44
CDC42BPB-209ENST00000634889 MAP3K9P80192 1104 aa17.77■□□□□ 0.44
CDC42BPB-209ENST00000634889 SLFNL1Q499Z3 407 aa17.77■□□□□ 0.44
CDC42BPB-209ENST00000634889 ERICH6BQ5W0A0 696 aa17.77■□□□□ 0.44
CDC42BPB-209ENST00000634889 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.77■□□□□ 0.44
CDC42BPB-209ENST00000634889 LCORLQ8N3X6 602 aa17.77■□□□□ 0.44
CDC42BPB-209ENST00000634889 SLC10A4Q96EP9 437 aa17.77■□□□□ 0.44
CDC42BPB-209ENST00000634889 PUS7LQ9H0K6 701 aaKnown RBP17.77■□□□□ 0.44
CDC42BPB-209ENST00000634889 PI4KBQ9UBF8 816 aa17.77■□□□□ 0.44
CDC42BPB-209ENST00000634889 ZNF112Q9UJU3 913 aa17.77■□□□□ 0.44
CDC42BPB-209ENST00000634889 CSADQ9Y600 493 aa17.77■□□□□ 0.44
CDC42BPB-209ENST00000634889 SIPA1L1O43166 1804 aa17.77■□□□□ 0.43
CDC42BPB-209ENST00000634889 PCNTO95613 3336 aa17.77■□□□□ 0.43
CDC42BPB-209ENST00000634889 CHGBP05060 677 aa17.76■□□□□ 0.43
CDC42BPB-209ENST00000634889 PDE4AP27815 886 aa17.76■□□□□ 0.43
CDC42BPB-209ENST00000634889 VGLL4Q14135 290 aa17.76■□□□□ 0.43
CDC42BPB-209ENST00000634889 CCDC136Q96JN2 1154 aa17.76■□□□□ 0.43
CDC42BPB-209ENST00000634889 CLMNQ96JQ2 1002 aa17.76■□□□□ 0.43
CDC42BPB-209ENST00000634889 ARMT1Q9H993 441 aa17.76■□□□□ 0.43
CDC42BPB-209ENST00000634889 ATP8A2Q9NTI2 1148 aa17.76■□□□□ 0.43
CDC42BPB-209ENST00000634889 HERC5Q9UII4 1024 aaKnown RBP17.76■□□□□ 0.43
CDC42BPB-209ENST00000634889 HLA-DOAP06340 250 aa17.75■□□□□ 0.43
CDC42BPB-209ENST00000634889 ZBTB48P10074 688 aaPredicted RBP17.75■□□□□ 0.43
CDC42BPB-209ENST00000634889 REM2Q8IYK8 340 aaPredicted RBP17.75■□□□□ 0.43
CDC42BPB-209ENST00000634889 OSBP2Q969R2 916 aa17.75■□□□□ 0.43
CDC42BPB-209ENST00000634889 PALD1Q9ULE6 856 aa17.75■□□□□ 0.43
CDC42BPB-209ENST00000634889 PHF20L1A8MW92 1017 aa17.74■□□□□ 0.43
CDC42BPB-209ENST00000634889 TRIM6-TRIM34B2RNG4 842 aa17.74■□□□□ 0.43
CDC42BPB-209ENST00000634889 AOC2O75106 756 aa17.74■□□□□ 0.43
CDC42BPB-209ENST00000634889 MAP2K1Q02750 393 aaPredicted RBP17.74■□□□□ 0.43
CDC42BPB-209ENST00000634889 ZMYM1Q5SVZ6 1142 aa17.74■□□□□ 0.43
CDC42BPB-209ENST00000634889 NOL9Q5SY16 702 aaKnown RBP17.74■□□□□ 0.43
CDC42BPB-209ENST00000634889 SPRYD7Q5W111 196 aa17.74■□□□□ 0.43
CDC42BPB-209ENST00000634889 TTC6Q86TZ1 520 aa17.74■□□□□ 0.43
CDC42BPB-209ENST00000634889 METTL16Q86W50 562 aaKnown RBP17.74■□□□□ 0.43
CDC42BPB-209ENST00000634889 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.74■□□□□ 0.43
CDC42BPB-209ENST00000634889 DCP1AQ9NPI6 582 aaPredicted RBP17.74■□□□□ 0.43
CDC42BPB-209ENST00000634889 SAP30BPQ9UHR5 308 aaKnown RBP17.74■□□□□ 0.43
CDC42BPB-209ENST00000634889 GNAT2P19087 354 aa17.73■□□□□ 0.43
CDC42BPB-209ENST00000634889 INPP5BP32019 993 aa17.73■□□□□ 0.43
CDC42BPB-209ENST00000634889 FOXP4Q8IVH2 680 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms