RNA–Protein interactions for RNA: ENST00000633109.1

LINC01002-221, Transcript of long intergenic non-protein coding RNA 1002, humanhuman

TSL 3

Gene LINC01002, Length 523 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01002-221ENST00000633109 TRIOBPQ9H2D6 2365 aa4.78□□□□□ -1.64
LINC01002-221ENST00000633109 PRUNE2Q8WUY3 3088 aa4.77□□□□□ -1.65
LINC01002-221ENST00000633109 ZNF646O15015 1829 aaPredicted RBP4.77□□□□□ -1.65
LINC01002-221ENST00000633109 COL1A1P02452 1464 aaPredicted RBP4.77□□□□□ -1.65
LINC01002-221ENST00000633109 CDH23Q9H251 3354 aa4.77□□□□□ -1.65
LINC01002-221ENST00000633109 CCNYL3P0C7X3 344 aa4.77□□□□□ -1.65
LINC01002-221ENST00000633109 MS4A1P11836 297 aa4.77□□□□□ -1.65
LINC01002-221ENST00000633109 PPP2R1AP30153 589 aa4.77□□□□□ -1.65
LINC01002-221ENST00000633109 PTSQ03393 145 aa4.77□□□□□ -1.65
LINC01002-221ENST00000633109 SF3B3Q15393 1217 aaKnown RBP4.77□□□□□ -1.65
LINC01002-221ENST00000633109 WASHC4Q2M389 1173 aa4.77□□□□□ -1.65
LINC01002-221ENST00000633109 TBC1D10BQ4KMP7 808 aaPredicted RBP4.77□□□□□ -1.65
LINC01002-221ENST00000633109 FBXO46Q6PJ61 603 aaPredicted RBP4.77□□□□□ -1.65
LINC01002-221ENST00000633109 DDX46Q7L014 1031 aaKnown RBP4.77□□□□□ -1.65
LINC01002-221ENST00000633109 PODNQ7Z5L7 613 aa4.77□□□□□ -1.65
LINC01002-221ENST00000633109 RETREG3Q86VR2 466 aa4.77□□□□□ -1.65
LINC01002-221ENST00000633109 PARP9Q8IXQ6 854 aa4.77□□□□□ -1.65
LINC01002-221ENST00000633109 ZNF296Q8WUU4 475 aaPredicted RBP4.77□□□□□ -1.65
LINC01002-221ENST00000633109 BAP1Q92560 729 aa4.77□□□□□ -1.65
LINC01002-221ENST00000633109 SYMPKQ92797 1274 aaKnown RBP4.77□□□□□ -1.65
LINC01002-221ENST00000633109 DCPSQ96C86 337 aaKnown RBP4.77□□□□□ -1.65
LINC01002-221ENST00000633109 ITPKCQ96DU7 683 aa4.77□□□□□ -1.65
LINC01002-221ENST00000633109 CDCA5Q96FF9 252 aa4.77□□□□□ -1.65
LINC01002-221ENST00000633109 GMLQ99445 158 aa4.77□□□□□ -1.65
LINC01002-221ENST00000633109 UNC93B1Q9H1C4 597 aa4.77□□□□□ -1.65
LINC01002-221ENST00000633109 PCDHGC3Q9UN70 934 aa4.77□□□□□ -1.65
LINC01002-221ENST00000633109 SCN9AQ15858 1988 aa4.76□□□□□ -1.65
LINC01002-221ENST00000633109 DLG5Q8TDM6 1919 aa4.76□□□□□ -1.65
LINC01002-221ENST00000633109 SPDYE5A6NIY4 337 aa4.76□□□□□ -1.65
LINC01002-221ENST00000633109 TCERG1O14776 1098 aaKnown RBP4.76□□□□□ -1.65
LINC01002-221ENST00000633109 ECE2O60344 883 aa4.76□□□□□ -1.65
LINC01002-221ENST00000633109 HOXB7P09629 217 aa4.76□□□□□ -1.65
LINC01002-221ENST00000633109 SLURP2P0DP57 97 aa4.76□□□□□ -1.65
LINC01002-221ENST00000633109 HCLS1P14317 486 aaPredicted RBP4.76□□□□□ -1.65
LINC01002-221ENST00000633109 MYL6BP14649 208 aa4.76□□□□□ -1.65
LINC01002-221ENST00000633109 TM4SF4P48230 202 aa4.76□□□□□ -1.65
LINC01002-221ENST00000633109 TRIM28Q13263 835 aaKnown RBP4.76□□□□□ -1.65
LINC01002-221ENST00000633109 NFE2L2Q16236 605 aa4.76□□□□□ -1.65
LINC01002-221ENST00000633109 PROSER3Q2NL68 480 aa4.76□□□□□ -1.65
LINC01002-221ENST00000633109 HABP4Q5JVS0 413 aaKnown RBP4.76□□□□□ -1.65
LINC01002-221ENST00000633109 DESI1Q6ICB0 168 aa4.76□□□□□ -1.65
LINC01002-221ENST00000633109 DLK2Q6UY11 383 aa4.76□□□□□ -1.65
LINC01002-221ENST00000633109 ZNF511Q8NB15 262 aa4.76□□□□□ -1.65
LINC01002-221ENST00000633109 AGBL3Q8NEM8 1001 aa4.76□□□□□ -1.65
LINC01002-221ENST00000633109 TBC1D16Q8TBP0 767 aa4.76□□□□□ -1.65
LINC01002-221ENST00000633109 FAM174AQ8TBP5 190 aa4.76□□□□□ -1.65
LINC01002-221ENST00000633109 EYA3Q99504 573 aa4.76□□□□□ -1.65
LINC01002-221ENST00000633109 DBNDD1Q9H9R9 158 aa4.76□□□□□ -1.65
LINC01002-221ENST00000633109 ENAMQ9NRM1 1142 aa4.76□□□□□ -1.65
LINC01002-221ENST00000633109 MIS18AQ9NYP9 233 aa4.76□□□□□ -1.65
LINC01002-221ENST00000633109 POLLQ9UGP5 575 aa4.76□□□□□ -1.65
LINC01002-221ENST00000633109 RRP7AQ9Y3A4 280 aaKnown RBP4.76□□□□□ -1.65
LINC01002-221ENST00000633109 ASTN2O75129 1339 aaPredicted RBP4.75□□□□□ -1.65
LINC01002-221ENST00000633109 SSC5DA1L4H1 1573 aa4.75□□□□□ -1.65
LINC01002-221ENST00000633109 GPR25O00155 361 aa4.75□□□□□ -1.65
LINC01002-221ENST00000633109 MMP14P50281 582 aa4.75□□□□□ -1.65
LINC01002-221ENST00000633109 FXR1P51114 621 aaKnown RBP eCLIP4.75□□□□□ -1.65
LINC01002-221ENST00000633109 GPSM2P81274 684 aa4.75□□□□□ -1.65
LINC01002-221ENST00000633109 SREBF2Q12772 1141 aa4.75□□□□□ -1.65
LINC01002-221ENST00000633109 TCIRG1Q13488 830 aa4.75□□□□□ -1.65
LINC01002-221ENST00000633109 ANGEL2Q5VTE6 544 aaKnown RBP4.75□□□□□ -1.65
LINC01002-221ENST00000633109 INTS3Q68E01 1043 aaKnown RBP4.75□□□□□ -1.65
LINC01002-221ENST00000633109 RSBN1LQ6PCB5 846 aaPredicted RBP4.75□□□□□ -1.65
LINC01002-221ENST00000633109 NGEFQ8N5V2 710 aa4.75□□□□□ -1.65
LINC01002-221ENST00000633109 SPIRE2Q8WWL2 714 aa4.75□□□□□ -1.65
LINC01002-221ENST00000633109 CELF1Q92879 486 aaKnown RBP4.75□□□□□ -1.65
LINC01002-221ENST00000633109 ARMC5Q96C12 935 aa4.75□□□□□ -1.65
LINC01002-221ENST00000633109 THUMPD2Q9BTF0 503 aaKnown RBP4.75□□□□□ -1.65
LINC01002-221ENST00000633109 ISCA1Q9BUE6 129 aa4.75□□□□□ -1.65
LINC01002-221ENST00000633109 TRMT112Q9UI30 125 aaKnown RBP4.75□□□□□ -1.65
LINC01002-221ENST00000633109 AKAP11Q9UKA4 1901 aa4.75□□□□□ -1.65
LINC01002-221ENST00000633109 MED23Q9ULK4 1368 aa4.75□□□□□ -1.65
LINC01002-221ENST00000633109 TAF1P21675 1872 aa4.75□□□□□ -1.65
LINC01002-221ENST00000633109 UNCXA6NJT0 531 aa4.74□□□□□ -1.65
LINC01002-221ENST00000633109 TTLL8A6PVC2 850 aa4.74□□□□□ -1.65
LINC01002-221ENST00000633109 PROCP04070 461 aa4.74□□□□□ -1.65
LINC01002-221ENST00000633109 PDE4DQ08499 809 aa4.74□□□□□ -1.65
LINC01002-221ENST00000633109 TTLL12Q14166 644 aaPredicted RBP4.74□□□□□ -1.65
LINC01002-221ENST00000633109 LDLRAD1Q5T700 205 aa4.74□□□□□ -1.65
LINC01002-221ENST00000633109 LCE3BQ5TA77 95 aa4.74□□□□□ -1.65
LINC01002-221ENST00000633109 SV2AQ7L0J3 742 aa4.74□□□□□ -1.65
LINC01002-221ENST00000633109 COPS6Q7L5N1 327 aa4.74□□□□□ -1.65
LINC01002-221ENST00000633109 VWA5B2Q8N398 1253 aa4.74□□□□□ -1.65
LINC01002-221ENST00000633109 MEIOBQ8N635 442 aa4.74□□□□□ -1.65
LINC01002-221ENST00000633109 CCDC155Q8N6L0 562 aa4.74□□□□□ -1.65
LINC01002-221ENST00000633109 PLBD2Q8NHP8 589 aa4.74□□□□□ -1.65
LINC01002-221ENST00000633109 XAGE3Q8WTP9 111 aa4.74□□□□□ -1.65
LINC01002-221ENST00000633109 NANOS1Q8WY41 292 aaKnown RBP4.74□□□□□ -1.65
LINC01002-221ENST00000633109 KLF16Q9BXK1 252 aaPredicted RBP4.74□□□□□ -1.65
LINC01002-221ENST00000633109 MYOZ2Q9NPC6 264 aa4.74□□□□□ -1.65
LINC01002-221ENST00000633109 KCNQ5Q9NR82 932 aa4.74□□□□□ -1.65
LINC01002-221ENST00000633109 TSPYL4Q9UJ04 414 aa4.74□□□□□ -1.65
LINC01002-221ENST00000633109 HDAC9Q9UKV0 1011 aa4.74□□□□□ -1.65
LINC01002-221ENST00000633109 NSFL1CQ9UNZ2 370 aaKnown RBP4.74□□□□□ -1.65
LINC01002-221ENST00000633109 XDHP47989 1333 aa4.73□□□□□ -1.65
LINC01002-221ENST00000633109 MYO3BQ8WXR4 1341 aa4.73□□□□□ -1.65
LINC01002-221ENST00000633109 FIGNL2A6NMB9 653 aa4.73□□□□□ -1.65
LINC01002-221ENST00000633109 C6orf229H3BNL8 230 aa4.73□□□□□ -1.65
LINC01002-221ENST00000633109 SPTLC1O15269 473 aa4.73□□□□□ -1.65
LINC01002-221ENST00000633109 FKTNO75072 461 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms