RNA–Protein interactions for RNA: ENST00000629346.2

CHD2-218, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 1,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-218ENST00000629346 FLIIQ13045 1269 aa15.1■□□□□ 0.01
CHD2-218ENST00000629346 PIAS4Q8N2W9 510 aaPredicted RBP15.1■□□□□ 0.01
CHD2-218ENST00000629346 MRIQ9BWK5 157 aa15.1■□□□□ 0.01
CHD2-218ENST00000629346 OGDHLQ9ULD0 1010 aa15.1■□□□□ 0.01
CHD2-218ENST00000629346 AK9Q5TCS8 1911 aa15.09■□□□□ 0.01
CHD2-218ENST00000629346 TRIM75PA6NK02 468 aa15.09■□□□□ 0.01
CHD2-218ENST00000629346 PTPRAP18433 802 aa15.09■□□□□ 0.01
CHD2-218ENST00000629346 NFIAQ12857 509 aa15.09■□□□□ 0.01
CHD2-218ENST00000629346 LRRC26Q2I0M4 334 aa15.09■□□□□ 0.01
CHD2-218ENST00000629346 CAVIN4Q5BKX8 364 aa15.09■□□□□ 0.01
CHD2-218ENST00000629346 HHIPL2Q6UWX4 724 aa15.09■□□□□ 0.01
CHD2-218ENST00000629346 SCYL3Q8IZE3 742 aa15.09■□□□□ 0.01
CHD2-218ENST00000629346 SYMPKQ92797 1274 aaKnown RBP15.09■□□□□ 0.01
CHD2-218ENST00000629346 LBHD1Q9BQE6 289 aaPredicted RBP15.09■□□□□ 0.01
CHD2-218ENST00000629346 SLC45A1Q9Y2W3 748 aa15.09■□□□□ 0.01
CHD2-218ENST00000629346 AFG3L2Q9Y4W6 797 aa15.09■□□□□ 0.01
CHD2-218ENST00000629346 MAST3O60307 1309 aa15.09■□□□□ 0.01
CHD2-218ENST00000629346 DOCK3Q8IZD9 2030 aa15.09■□□□□ 0.01
CHD2-218ENST00000629346 ZEB1P37275 1124 aaPredicted RBP15.08■□□□□ 0
CHD2-218ENST00000629346 TWISTNBQ3B726 338 aaPredicted RBP15.08■□□□□ 0
CHD2-218ENST00000629346 CDC42EP5Q6NZY7 148 aa15.08■□□□□ 0
CHD2-218ENST00000629346 ZFPM1Q8IX07 1006 aa15.08■□□□□ 0
CHD2-218ENST00000629346 MYLIPQ8WY64 445 aa15.08■□□□□ 0
CHD2-218ENST00000629346 TTC28Q96AY4 2481 aa15.08■□□□□ 0
CHD2-218ENST00000629346 PHF20L1A8MW92 1017 aa15.07■□□□□ 0
CHD2-218ENST00000629346 CCDC84Q86UT8 332 aaPredicted RBP15.07■□□□□ 0
CHD2-218ENST00000629346 TRIB2Q92519 343 aa15.07■□□□□ 0
CHD2-218ENST00000629346 SEMA6BQ9H3T3 888 aa15.07■□□□□ 0
CHD2-218ENST00000629346 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.07■□□□□ 0
CHD2-218ENST00000629346 FAM198AQ9UFP1 575 aa15.07■□□□□ 0
CHD2-218ENST00000629346 GJD2Q9UKL4 321 aa15.07■□□□□ 0
CHD2-218ENST00000629346 F6X3S4 739 aa15.06■□□□□ 0
CHD2-218ENST00000629346 COL6A1P12109 1028 aa15.06■□□□□ 0
CHD2-218ENST00000629346 PRKAR2AP13861 404 aaKnown RBP15.06■□□□□ 0
CHD2-218ENST00000629346 CYP2B6P20813 491 aa15.06■□□□□ 0
CHD2-218ENST00000629346 DIXDC1Q155Q3 683 aa15.06■□□□□ 0
CHD2-218ENST00000629346 FAM110CQ1W6H9 321 aa15.06■□□□□ 0
CHD2-218ENST00000629346 TREML2Q5T2D2 321 aa15.06■□□□□ 0
CHD2-218ENST00000629346 AGTPBP1Q9UPW5 1226 aa15.06■□□□□ 0
CHD2-218ENST00000629346 LRRFIP2Q9Y608 721 aaKnown RBP15.06■□□□□ 0
CHD2-218ENST00000629346 MYBBP1AQ9BQG0 1328 aaKnown RBP15.06■□□□□ 0
CHD2-218ENST00000629346 COL2A1P02458 1487 aaPredicted RBP15.06■□□□□ 0
CHD2-218ENST00000629346 SLURP2P0DP57 97 aa15.05■□□□□ -0
CHD2-218ENST00000629346 USP40Q9NVE5 1235 aa15.05■□□□□ -0
CHD2-218ENST00000629346 SUGT1Q9Y2Z0 365 aa15.05■□□□□ -0
CHD2-218ENST00000629346 DAGLAQ9Y4D2 1042 aa15.05■□□□□ -0
CHD2-218ENST00000629346 MROH5Q6ZUA9 1318 aa15.05■□□□□ -0
CHD2-218ENST00000629346 TNFRSF10AO00220 468 aa15.04■□□□□ -0
CHD2-218ENST00000629346 FOSL2P15408 326 aa15.04■□□□□ -0
CHD2-218ENST00000629346 METTL24Q5JXM2 366 aa15.04■□□□□ -0
CHD2-218ENST00000629346 PNMA3Q9UL41 463 aa15.04■□□□□ -0
CHD2-218ENST00000629346 DNAH12Q6ZR08 3092 aa15.03■□□□□ -0
CHD2-218ENST00000629346 GRM8O00222 908 aa15.03■□□□□ -0
CHD2-218ENST00000629346 LRRC24Q50LG9 513 aa15.03■□□□□ -0
CHD2-218ENST00000629346 BEND3Q5T5X7 828 aa15.03■□□□□ -0
CHD2-218ENST00000629346 ZSCAN29Q8IWY8 852 aaPredicted RBP15.03■□□□□ -0
CHD2-218ENST00000629346 SENP6Q9GZR1 1112 aaPredicted RBP15.03■□□□□ -0
CHD2-218ENST00000629346 SPINK5Q9NQ38 1064 aaPredicted RBP15.03■□□□□ -0
CHD2-218ENST00000629346 C9orf78Q9NZ63 289 aaPredicted RBP15.03■□□□□ -0
CHD2-218ENST00000629346 CCND3P30281 292 aaPredicted RBP15.02■□□□□ -0
CHD2-218ENST00000629346 PLA2G5P39877 138 aa15.02■□□□□ -0
CHD2-218ENST00000629346 GCLCP48506 637 aaPredicted RBP15.02■□□□□ -0
CHD2-218ENST00000629346 CACNB2Q08289 660 aaPredicted RBP15.02■□□□□ -0
CHD2-218ENST00000629346 SHHQ15465 462 aa15.02■□□□□ -0
CHD2-218ENST00000629346 MAP3K21Q5TCX8 1036 aa15.02■□□□□ -0
CHD2-218ENST00000629346 FAM122AQ96E09 287 aa15.02■□□□□ -0
CHD2-218ENST00000629346 TTYH1Q9H313 450 aaPredicted RBP15.02■□□□□ -0
CHD2-218ENST00000629346 ATRNL1Q5VV63 1379 aa15.01□□□□□ -0.01
CHD2-218ENST00000629346 TMEM265A0A087WTH1 108 aa15.01□□□□□ -0.01
CHD2-218ENST00000629346 RGS3P49796 1198 aa15.01□□□□□ -0.01
CHD2-218ENST00000629346 ATN1P54259 1190 aaPredicted RBP15.01□□□□□ -0.01
CHD2-218ENST00000629346 TJAP1Q5JTD0 557 aa15.01□□□□□ -0.01
CHD2-218ENST00000629346 PRKAG2Q9UGJ0 569 aa15.01□□□□□ -0.01
CHD2-218ENST00000629346 MUC3AQ02505 3323 aa15.01□□□□□ -0.01
CHD2-218ENST00000629346 PEX10O60683 326 aa15□□□□□ -0.01
CHD2-218ENST00000629346 CTNND1O60716 968 aaKnown RBP15□□□□□ -0.01
CHD2-218ENST00000629346 PDE8BO95263 885 aa15□□□□□ -0.01
CHD2-218ENST00000629346 C9orf50Q5SZB4 431 aa15□□□□□ -0.01
CHD2-218ENST00000629346 LHX8Q68G74 356 aa15□□□□□ -0.01
CHD2-218ENST00000629346 WDR66Q8TBY9 1149 aa15□□□□□ -0.01
CHD2-218ENST00000629346 PTPRFP10586 1907 aa15□□□□□ -0.01
CHD2-218ENST00000629346 ZKSCAN1P17029 563 aaPredicted RBP14.99□□□□□ -0.01
CHD2-218ENST00000629346 PRDX5P30044 214 aa14.99□□□□□ -0.01
CHD2-218ENST00000629346 SPP2Q13103 211 aa14.99□□□□□ -0.01
CHD2-218ENST00000629346 SH3BP5LQ7L8J4 393 aa14.99□□□□□ -0.01
CHD2-218ENST00000629346 SUCLG2Q96I99 432 aa14.99□□□□□ -0.01
CHD2-218ENST00000629346 NUDT12Q9BQG2 462 aa14.99□□□□□ -0.01
CHD2-218ENST00000629346 ASCC2Q9H1I8 757 aaPredicted RBP14.99□□□□□ -0.01
CHD2-218ENST00000629346 PRKRIP1Q9H875 184 aaPredicted RBP14.99□□□□□ -0.01
CHD2-218ENST00000629346 CDH23Q9H251 3354 aa14.98□□□□□ -0.01
CHD2-218ENST00000629346 DDTLA6NHG4 134 aaPredicted RBP14.98□□□□□ -0.01
CHD2-218ENST00000629346 IFIT1P09914 478 aaKnown RBP14.98□□□□□ -0.01
CHD2-218ENST00000629346 HMGCS2P54868 508 aa14.98□□□□□ -0.01
CHD2-218ENST00000629346 VGLL2Q8N8G2 317 aa14.98□□□□□ -0.01
CHD2-218ENST00000629346 PROCA1Q8NCQ7 364 aaPredicted RBP14.98□□□□□ -0.01
CHD2-218ENST00000629346 PLXNB2O15031 1838 aa14.97□□□□□ -0.01
CHD2-218ENST00000629346 ENTPD3O75355 529 aa14.97□□□□□ -0.01
CHD2-218ENST00000629346 LDHBP07195 334 aaKnown RBP14.97□□□□□ -0.01
CHD2-218ENST00000629346 PABPC4Q13310 644 aaKnown RBP eCLIP14.97□□□□□ -0.01
CHD2-218ENST00000629346 PICALMQ13492 652 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms