RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 CLEC10AQ8IUN9 316 aa8.68□□□□□ -1.02
PKP4-217ENST00000628904 TRMT44Q8IYL2 757 aaKnown RBP8.68□□□□□ -1.02
PKP4-217ENST00000628904 AKAP12Q02952 1782 aa8.68□□□□□ -1.02
PKP4-217ENST00000628904 PDE4CQ08493 712 aa8.67□□□□□ -1.02
PKP4-217ENST00000628904 NKX1-1Q15270 411 aaPredicted RBP8.67□□□□□ -1.02
PKP4-217ENST00000628904 CEP57L1Q8IYX8 460 aa8.67□□□□□ -1.02
PKP4-217ENST00000628904 MRPS27Q92552 414 aaKnown RBP8.67□□□□□ -1.02
PKP4-217ENST00000628904 ZSCAN16Q9H4T2 348 aaPredicted RBP8.67□□□□□ -1.02
PKP4-217ENST00000628904 FAM205CA6NFA0 338 aa8.67□□□□□ -1.02
PKP4-217ENST00000628904 KIF28PB7ZC32 967 aa8.67□□□□□ -1.02
PKP4-217ENST00000628904 CLSTN1O94985 981 aa8.67□□□□□ -1.02
PKP4-217ENST00000628904 XBP1P17861 261 aa8.67□□□□□ -1.02
PKP4-217ENST00000628904 ANTXR2P58335 489 aa8.67□□□□□ -1.02
PKP4-217ENST00000628904 TFAP4Q01664 338 aa8.67□□□□□ -1.02
PKP4-217ENST00000628904 PNOCQ13519 176 aa8.67□□□□□ -1.02
PKP4-217ENST00000628904 LTN1O94822 1766 aa8.67□□□□□ -1.02
PKP4-217ENST00000628904 VWA3AA6NCI4 1184 aa8.67□□□□□ -1.02
PKP4-217ENST00000628904 USP17L3A6NCW0 530 aa8.67□□□□□ -1.02
PKP4-217ENST00000628904 USP17L4A6NCW7 530 aa8.67□□□□□ -1.02
PKP4-217ENST00000628904 LETM1O95202 739 aaPredicted RBP8.67□□□□□ -1.02
PKP4-217ENST00000628904 CSF1RP07333 972 aa8.67□□□□□ -1.02
PKP4-217ENST00000628904 RBM26Q5T8P6 1007 aaKnown RBP8.67□□□□□ -1.02
PKP4-217ENST00000628904 C11orf57Q6ZUT1 292 aaPredicted RBP8.67□□□□□ -1.02
PKP4-217ENST00000628904 RASGRP2Q7LDG7 609 aa8.67□□□□□ -1.02
PKP4-217ENST00000628904 USP17L1Q7RTZ2 530 aa8.67□□□□□ -1.02
PKP4-217ENST00000628904 VSIG10Q8N0Z9 540 aa8.67□□□□□ -1.02
PKP4-217ENST00000628904 FAM200AQ8TCP9 573 aa8.67□□□□□ -1.02
PKP4-217ENST00000628904 CRNKL1Q9BZJ0 848 aaKnown RBP8.67□□□□□ -1.02
PKP4-217ENST00000628904 GOLPH3LQ9H4A5 285 aa8.67□□□□□ -1.02
PKP4-217ENST00000628904 EPB41L4AQ9HCS5 686 aaPredicted RBP8.67□□□□□ -1.02
PKP4-217ENST00000628904 CARMIL3Q8ND23 1372 aa8.66□□□□□ -1.02
PKP4-217ENST00000628904 MED1Q15648 1581 aaPredicted RBP8.66□□□□□ -1.02
PKP4-217ENST00000628904 TPM4P67936 248 aa8.66□□□□□ -1.02
PKP4-217ENST00000628904 MECOMQ03112 1051 aa8.66□□□□□ -1.02
PKP4-217ENST00000628904 MYSM1Q5VVJ2 828 aa8.66□□□□□ -1.02
PKP4-217ENST00000628904 PIK3AP1Q6ZUJ8 805 aa8.66□□□□□ -1.02
PKP4-217ENST00000628904 TMC6Q7Z403 805 aa8.66□□□□□ -1.02
PKP4-217ENST00000628904 KIAA0825Q8IV33 1275 aa8.66□□□□□ -1.02
PKP4-217ENST00000628904 ZNF34Q8IZ26 560 aa8.66□□□□□ -1.02
PKP4-217ENST00000628904 PCMTD1Q96MG8 357 aaPredicted RBP8.66□□□□□ -1.02
PKP4-217ENST00000628904 KAT14Q9H8E8 782 aa8.66□□□□□ -1.02
PKP4-217ENST00000628904 DDX19AQ9NUU7 478 aaKnown RBP8.66□□□□□ -1.02
PKP4-217ENST00000628904 AFF2P51816 1311 aa8.66□□□□□ -1.02
PKP4-217ENST00000628904 CPDO75976 1380 aa8.66□□□□□ -1.02
PKP4-217ENST00000628904 MED23Q9ULK4 1368 aa8.66□□□□□ -1.02
PKP4-217ENST00000628904 POLR2DO15514 142 aaKnown RBP8.66□□□□□ -1.02
PKP4-217ENST00000628904 ECM2O94769 699 aaPredicted RBP8.66□□□□□ -1.02
PKP4-217ENST00000628904 PLEKHA8P1O95397 391 aa8.66□□□□□ -1.02
PKP4-217ENST00000628904 MFSD14BQ5SR56 506 aa8.66□□□□□ -1.02
PKP4-217ENST00000628904 ANO1Q5XXA6 986 aa8.66□□□□□ -1.02
PKP4-217ENST00000628904 ZNF654Q8IZM8 581 aa8.66□□□□□ -1.02
PKP4-217ENST00000628904 OXER1Q8TDS5 423 aa8.66□□□□□ -1.02
PKP4-217ENST00000628904 NOC3LQ8WTT2 800 aaKnown RBP8.66□□□□□ -1.02
PKP4-217ENST00000628904 UBA5Q9GZZ9 404 aa8.66□□□□□ -1.02
PKP4-217ENST00000628904 ZNF804BA4D1E1 1349 aa8.66□□□□□ -1.02
PKP4-217ENST00000628904 USP42Q9H9J4 1324 aaKnown RBP8.66□□□□□ -1.02
PKP4-217ENST00000628904 GSG1L2A8MUP6 293 aa8.66□□□□□ -1.02
PKP4-217ENST00000628904 FDPSP14324 419 aaKnown RBP8.66□□□□□ -1.02
PKP4-217ENST00000628904 RESTQ13127 1097 aa8.66□□□□□ -1.02
PKP4-217ENST00000628904 FBXO18Q8NFZ0 1043 aa8.66□□□□□ -1.02
PKP4-217ENST00000628904 FAM84BQ96KN1 310 aaPredicted RBP8.66□□□□□ -1.02
PKP4-217ENST00000628904 KRT23Q9C075 422 aa8.66□□□□□ -1.02
PKP4-217ENST00000628904 RNF41Q9H4P4 317 aaPredicted RBP8.66□□□□□ -1.02
PKP4-217ENST00000628904 DBNDD1Q9H9R9 158 aa8.66□□□□□ -1.02
PKP4-217ENST00000628904 ZNF202O95125 648 aa8.65□□□□□ -1.02
PKP4-217ENST00000628904 ZYXQ15942 572 aaKnown RBP8.65□□□□□ -1.02
PKP4-217ENST00000628904 CCDC96Q2M329 555 aa8.65□□□□□ -1.02
PKP4-217ENST00000628904 ZC3H12CQ9C0D7 883 aaKnown RBP8.65□□□□□ -1.02
PKP4-217ENST00000628904 BRMS1Q9HCU9 246 aa8.65□□□□□ -1.02
PKP4-217ENST00000628904 CLCN1P35523 988 aa8.65□□□□□ -1.02
PKP4-217ENST00000628904 SMYD4Q8IYR2 804 aaPredicted RBP8.65□□□□□ -1.02
PKP4-217ENST00000628904 CRACR2BQ8N4Y2 399 aaPredicted RBP8.65□□□□□ -1.02
PKP4-217ENST00000628904 BLZF1Q9H2G9 400 aa8.65□□□□□ -1.02
PKP4-217ENST00000628904 GPCPD1Q9NPB8 672 aa8.65□□□□□ -1.02
PKP4-217ENST00000628904 ZKSCAN5Q9Y2L8 839 aa8.65□□□□□ -1.02
PKP4-217ENST00000628904 ERVV-1B6SEH8 477 aa8.65□□□□□ -1.03
PKP4-217ENST00000628904 FOXN1O15353 648 aa8.65□□□□□ -1.03
PKP4-217ENST00000628904 NTSR2O95665 410 aa8.65□□□□□ -1.03
PKP4-217ENST00000628904 TEX11Q8IYF3 940 aa8.65□□□□□ -1.03
PKP4-217ENST00000628904 GPR108Q9NPR9 543 aa8.65□□□□□ -1.03
PKP4-217ENST00000628904 IFNKQ9P0W0 207 aa8.65□□□□□ -1.03
PKP4-217ENST00000628904 FMN2Q9NZ56 1722 aa8.65□□□□□ -1.03
PKP4-217ENST00000628904 SERPINB2P05120 415 aa8.64□□□□□ -1.03
PKP4-217ENST00000628904 ST5P78524 1137 aa8.64□□□□□ -1.03
PKP4-217ENST00000628904 PDE4BQ07343 736 aa8.64□□□□□ -1.03
PKP4-217ENST00000628904 UBE3CQ15386 1083 aa8.64□□□□□ -1.03
PKP4-217ENST00000628904 DPCR1Q3MIW9 517 aa8.64□□□□□ -1.03
PKP4-217ENST00000628904 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.64□□□□□ -1.03
PKP4-217ENST00000628904 JMYQ8N9B5 988 aa8.64□□□□□ -1.03
PKP4-217ENST00000628904 NAT10Q9H0A0 1025 aaKnown RBP8.64□□□□□ -1.03
PKP4-217ENST00000628904 FRMPD2Q68DX3 1309 aaPredicted RBP8.64□□□□□ -1.03
PKP4-217ENST00000628904 LRRC47Q8N1G4 583 aaKnown RBP8.64□□□□□ -1.03
PKP4-217ENST00000628904 FANCBQ8NB91 859 aa8.64□□□□□ -1.03
PKP4-217ENST00000628904 ZFP91Q96JP5 570 aaPredicted RBP8.64□□□□□ -1.03
PKP4-217ENST00000628904 CDCA7Q9BWT1 371 aaPredicted RBP8.64□□□□□ -1.03
PKP4-217ENST00000628904 PFKFB1P16118 471 aa8.64□□□□□ -1.03
PKP4-217ENST00000628904 TRIM28Q13263 835 aaKnown RBP8.64□□□□□ -1.03
PKP4-217ENST00000628904 ENOX2Q16206 610 aaKnown RBP8.64□□□□□ -1.03
PKP4-217ENST00000628904 MB21D2Q8IYB1 491 aaPredicted RBP8.64□□□□□ -1.03
PKP4-217ENST00000628904 ZNF274Q96GC6 653 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms