RNA–Protein interactions for RNA: ENST00000622972.3

LINC00963-215, long intergenic non-protein coding RNA 963, human

TSL 5

Gene LINC00963, Length 444 nt, Biotype lincRNA, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00963-215	ENST00000622972	COL1A1	P02452	1464 aa	Predicted RBP	7.31	□□□□□ -1.24
LINC00963-215	ENST00000622972	CLRN2	A0PK11	232 aa		7.31	□□□□□ -1.24
LINC00963-215	ENST00000622972	TK2	O00142	265 aa		7.31	□□□□□ -1.24
LINC00963-215	ENST00000622972	OAT	P04181	439 aa		7.31	□□□□□ -1.24
LINC00963-215	ENST00000622972	UBTFL1	P0CB47	393 aa	Predicted RBP	7.31	□□□□□ -1.24
LINC00963-215	ENST00000622972	PTPN12	Q05209	780 aa	Known RBP	7.31	□□□□□ -1.24
LINC00963-215	ENST00000622972	CFAP100	Q494V2	611 aa		7.31	□□□□□ -1.24
LINC00963-215	ENST00000622972	LRRC24	Q50LG9	513 aa		7.31	□□□□□ -1.24
LINC00963-215	ENST00000622972	CEP85	Q6P2H3	762 aa		7.31	□□□□□ -1.24
LINC00963-215	ENST00000622972	ATG9A	Q7Z3C6	839 aa		7.31	□□□□□ -1.24
LINC00963-215	ENST00000622972	VGLL2	Q8N8G2	317 aa		7.31	□□□□□ -1.24
LINC00963-215	ENST00000622972	TTC13	Q8NBP0	860 aa		7.31	□□□□□ -1.24
LINC00963-215	ENST00000622972	EXOC6	Q8TAG9	804 aa		7.31	□□□□□ -1.24
LINC00963-215	ENST00000622972	SAGE1	Q9NXZ1	904 aa		7.31	□□□□□ -1.24
LINC00963-215	ENST00000622972	KIAA1468	Q9P260	1216 aa		7.31	□□□□□ -1.24
LINC00963-215	ENST00000622972	ANGEL1	Q9UNK9	670 aa	Known RBP	7.31	□□□□□ -1.24
LINC00963-215	ENST00000622972	DOCK2	Q92608	1830 aa		7.31	□□□□□ -1.24
LINC00963-215	ENST00000622972	PPP1R12B	O60237	982 aa	Predicted RBP	7.3	□□□□□ -1.24
LINC00963-215	ENST00000622972	TBC1D8	O95759	1140 aa		7.3	□□□□□ -1.24
LINC00963-215	ENST00000622972	HIBADH	P31937	336 aa	Known RBP	7.3	□□□□□ -1.24
LINC00963-215	ENST00000622972	GYG1	P46976	350 aa		7.3	□□□□□ -1.24
LINC00963-215	ENST00000622972	MLLT1	Q03111	559 aa	Predicted RBP	7.3	□□□□□ -1.24
LINC00963-215	ENST00000622972	CHAF1A	Q13111	956 aa	Predicted RBP	7.3	□□□□□ -1.24
LINC00963-215	ENST00000622972	UBE4A	Q14139	1066 aa		7.3	□□□□□ -1.24
LINC00963-215	ENST00000622972	METTL24	Q5JXM2	366 aa		7.3	□□□□□ -1.24
LINC00963-215	ENST00000622972	FTSJ3	Q8IY81	847 aa	Known RBP	7.3	□□□□□ -1.24
LINC00963-215	ENST00000622972	SLC10A4	Q96EP9	437 aa		7.3	□□□□□ -1.24
LINC00963-215	ENST00000622972	DEFB129	Q9H1M3	183 aa		7.3	□□□□□ -1.24
LINC00963-215	ENST00000622972	RABGEF1	Q9UJ41	708 aa		7.3	□□□□□ -1.24
LINC00963-215	ENST00000622972	PNMA3	Q9UL41	463 aa		7.3	□□□□□ -1.24
LINC00963-215	ENST00000622972	VPS9D1	Q9Y2B5	631 aa		7.3	□□□□□ -1.24
LINC00963-215	ENST00000622972	CDK5RAP2	Q96SN8	1893 aa		7.3	□□□□□ -1.24
LINC00963-215	ENST00000622972	IL1R1	P14778	569 aa		7.29	□□□□□ -1.24
LINC00963-215	ENST00000622972	SREBF2	Q12772	1141 aa		7.29	□□□□□ -1.24
LINC00963-215	ENST00000622972	SUPT20HL1	Q3ZLR7	823 aa		7.29	□□□□□ -1.24
LINC00963-215	ENST00000622972	CAVIN4	Q5BKX8	364 aa		7.29	□□□□□ -1.24
LINC00963-215	ENST00000622972	MFSD14B	Q5SR56	506 aa		7.29	□□□□□ -1.24
LINC00963-215	ENST00000622972	ADGRD1	Q6QNK2	874 aa		7.29	□□□□□ -1.24
LINC00963-215	ENST00000622972	C15orf52	Q6ZUT6	534 aa	Known RBP	7.29	□□□□□ -1.24
LINC00963-215	ENST00000622972	NUDT18	Q6ZVK8	323 aa		7.29	□□□□□ -1.24
LINC00963-215	ENST00000622972	CERS5	Q8N5B7	392 aa		7.29	□□□□□ -1.24
LINC00963-215	ENST00000622972	SSH3	Q8TE77	659 aa		7.29	□□□□□ -1.24
LINC00963-215	ENST00000622972	TATDN2	Q93075	761 aa		7.29	□□□□□ -1.24
LINC00963-215	ENST00000622972	NBPF3	Q9H094	633 aa		7.29	□□□□□ -1.24
LINC00963-215	ENST00000622972	FAM198A	Q9UFP1	575 aa		7.29	□□□□□ -1.24
LINC00963-215	ENST00000622972	TTF2	Q9UNY4	1162 aa	Known RBP	7.29	□□□□□ -1.24
LINC00963-215	ENST00000622972	FZD1	Q9UP38	647 aa		7.29	□□□□□ -1.24
LINC00963-215	ENST00000622972	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	7.29	□□□□□ -1.24
LINC00963-215	ENST00000622972	RIPOR2	Q9Y4F9	1068 aa		7.29	□□□□□ -1.24
LINC00963-215	ENST00000622972	PCNT	O95613	3336 aa		7.29	□□□□□ -1.24
LINC00963-215	ENST00000622972	MYH7	P12883	1935 aa		7.29	□□□□□ -1.24
LINC00963-215	ENST00000622972	MROH5	Q6ZUA9	1318 aa		7.28	□□□□□ -1.24
LINC00963-215	ENST00000622972	GNAI2	P04899	355 aa		7.28	□□□□□ -1.24
LINC00963-215	ENST00000622972	GNAI3	P08754	354 aa		7.28	□□□□□ -1.24
LINC00963-215	ENST00000622972	IREB2	P48200	963 aa	Known RBP	7.28	□□□□□ -1.24
LINC00963-215	ENST00000622972	FKBP1A	P62942	108 aa	Known RBP	7.28	□□□□□ -1.24
LINC00963-215	ENST00000622972	ATP8B2	P98198	1209 aa		7.28	□□□□□ -1.24
LINC00963-215	ENST00000622972	TNFAIP1	Q13829	316 aa		7.28	□□□□□ -1.24
LINC00963-215	ENST00000622972	CTU1	Q7Z7A3	348 aa	Known RBP	7.28	□□□□□ -1.24
LINC00963-215	ENST00000622972	PRMT6	Q96LA8	375 aa	Predicted RBP	7.28	□□□□□ -1.24
LINC00963-215	ENST00000622972	COPRS	Q9NQ92	184 aa		7.28	□□□□□ -1.24
LINC00963-215	ENST00000622972	DDX19B	Q9UMR2	479 aa		7.28	□□□□□ -1.24
LINC00963-215	ENST00000622972	PCDHAC2	Q9Y5I4	1007 aa		7.28	□□□□□ -1.24
LINC00963-215	ENST00000622972	PPP2R3B	Q9Y5P8	575 aa		7.28	□□□□□ -1.24
LINC00963-215	ENST00000622972	ADGRG1	Q9Y653	693 aa		7.28	□□□□□ -1.24
LINC00963-215	ENST00000622972	ECM29	Q5VYK3	1845 aa		7.28	□□□□□ -1.24
LINC00963-215	ENST00000622972	TCP10L2	B9ZVM9	353 aa		7.27	□□□□□ -1.25
LINC00963-215	ENST00000622972	SRGAP3	O43295	1099 aa		7.27	□□□□□ -1.25
LINC00963-215	ENST00000622972	IFIT1	P09914	478 aa	Known RBP	7.27	□□□□□ -1.25
LINC00963-215	ENST00000622972	TNNI2	P48788	182 aa		7.27	□□□□□ -1.25
LINC00963-215	ENST00000622972	SOX10	P56693	466 aa		7.27	□□□□□ -1.25
LINC00963-215	ENST00000622972	RASA3	Q14644	834 aa		7.27	□□□□□ -1.25
LINC00963-215	ENST00000622972	NBPF12	Q5TAG4	269 aa	Predicted RBP	7.27	□□□□□ -1.25
LINC00963-215	ENST00000622972	SPRYD7	Q5W111	196 aa		7.27	□□□□□ -1.25
LINC00963-215	ENST00000622972	MTMR14	Q8NCE2	650 aa		7.27	□□□□□ -1.25
LINC00963-215	ENST00000622972	TDRD7	Q8NHU6	1098 aa	Known RBP	7.27	□□□□□ -1.25
LINC00963-215	ENST00000622972	ZNF296	Q8WUU4	475 aa	Predicted RBP	7.27	□□□□□ -1.25
LINC00963-215	ENST00000622972	ZBED3	Q96IU2	234 aa	Predicted RBP	7.27	□□□□□ -1.25
LINC00963-215	ENST00000622972	FAM84B	Q96KN1	310 aa	Predicted RBP	7.27	□□□□□ -1.25
LINC00963-215	ENST00000622972	KRTAP3-3	Q9BYR6	98 aa		7.27	□□□□□ -1.25
LINC00963-215	ENST00000622972	KRTAP3-2	Q9BYR7	98 aa		7.27	□□□□□ -1.25
LINC00963-215	ENST00000622972	SIL1	Q9H173	461 aa		7.27	□□□□□ -1.25
LINC00963-215	ENST00000622972	TDRD3	Q9H7E2	651 aa	Known RBP	7.27	□□□□□ -1.25
LINC00963-215	ENST00000622972	TMOD2	Q9NZR1	351 aa		7.27	□□□□□ -1.25
LINC00963-215	ENST00000622972	ZNF70	Q9UC06	446 aa	Predicted RBP	7.27	□□□□□ -1.25
LINC00963-215	ENST00000622972	MAST2	Q6P0Q8	1798 aa		7.27	□□□□□ -1.25
LINC00963-215	ENST00000622972	FAM205A	Q6ZU69	1335 aa		7.27	□□□□□ -1.25
LINC00963-215	ENST00000622972	MANSC4	A6NHS7	340 aa	Predicted RBP	7.26	□□□□□ -1.25
LINC00963-215	ENST00000622972	GPR25	O00155	361 aa		7.26	□□□□□ -1.25
LINC00963-215	ENST00000622972	EYA2	O00167	538 aa		7.26	□□□□□ -1.25
LINC00963-215	ENST00000622972	SMAP	O00193	183 aa		7.26	□□□□□ -1.25
LINC00963-215	ENST00000622972	FKTN	O75072	461 aa		7.26	□□□□□ -1.25
LINC00963-215	ENST00000622972	PDE8B	O95263	885 aa		7.26	□□□□□ -1.25
LINC00963-215	ENST00000622972	ALDH1A1	P00352	501 aa		7.26	□□□□□ -1.25
LINC00963-215	ENST00000622972	FGFR2	P21802	821 aa		7.26	□□□□□ -1.25
LINC00963-215	ENST00000622972	ADORA1	P30542	326 aa		7.26	□□□□□ -1.25
LINC00963-215	ENST00000622972	CRK	P46108	304 aa		7.26	□□□□□ -1.25
LINC00963-215	ENST00000622972	TM4SF4	P48230	202 aa		7.26	□□□□□ -1.25
LINC00963-215	ENST00000622972	INHBE	P58166	350 aa		7.26	□□□□□ -1.25
LINC00963-215	ENST00000622972	LDLRAD1	Q5T700	205 aa		7.26	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms