RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 IARSP41252 1262 aaKnown RBP10.93□□□□□ -0.66
PDPN-212ENST00000621990 SF3B3Q15393 1217 aaKnown RBP10.93□□□□□ -0.66
PDPN-212ENST00000621990 DNTTIP2Q5QJE6 756 aaKnown RBP10.93□□□□□ -0.66
PDPN-212ENST00000621990 MFSD6Q6ZSS7 791 aa10.93□□□□□ -0.66
PDPN-212ENST00000621990 PHKBQ93100 1093 aa10.93□□□□□ -0.66
PDPN-212ENST00000621990 ACSBG1Q96GR2 724 aa10.93□□□□□ -0.66
PDPN-212ENST00000621990 SDF4Q9BRK5 362 aa10.93□□□□□ -0.66
PDPN-212ENST00000621990 PDCL3Q9H2J4 239 aa10.93□□□□□ -0.66
PDPN-212ENST00000621990 INCENPQ9NQS7 918 aa10.93□□□□□ -0.66
PDPN-212ENST00000621990 ANAPC4Q9UJX5 808 aa10.93□□□□□ -0.66
PDPN-212ENST00000621990 SLC12A7Q9Y666 1083 aa10.93□□□□□ -0.66
PDPN-212ENST00000621990 COL24A1Q17RW2 1714 aa10.93□□□□□ -0.66
PDPN-212ENST00000621990 IFIT3O14879 490 aaKnown RBP10.93□□□□□ -0.66
PDPN-212ENST00000621990 RXRAP19793 462 aa10.93□□□□□ -0.66
PDPN-212ENST00000621990 CCDC144BQ3MJ40 725 aa10.93□□□□□ -0.66
PDPN-212ENST00000621990 CCDC144CPQ8IYA2 1237 aa10.93□□□□□ -0.66
PDPN-212ENST00000621990 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.93□□□□□ -0.66
PDPN-212ENST00000621990 DLEC1Q9Y238 1755 aa10.93□□□□□ -0.66
PDPN-212ENST00000621990 PRKAB2O43741 272 aa10.93□□□□□ -0.66
PDPN-212ENST00000621990 NEMFO60524 1076 aa10.93□□□□□ -0.66
PDPN-212ENST00000621990 LRMPQ12912 555 aa10.93□□□□□ -0.66
PDPN-212ENST00000621990 NFXL1Q6ZNB6 911 aa10.93□□□□□ -0.66
PDPN-212ENST00000621990 DRC7Q8IY82 874 aa10.93□□□□□ -0.66
PDPN-212ENST00000621990 JMYQ8N9B5 988 aa10.93□□□□□ -0.66
PDPN-212ENST00000621990 CACTINQ8WUQ7 758 aaKnown RBP10.93□□□□□ -0.66
PDPN-212ENST00000621990 WASF1Q92558 559 aa10.93□□□□□ -0.66
PDPN-212ENST00000621990 SLC4A4Q9Y6R1 1079 aa10.93□□□□□ -0.66
PDPN-212ENST00000621990 CCDC69A6NI79 296 aa10.92□□□□□ -0.66
PDPN-212ENST00000621990 FAM177BA6PVY3 158 aa10.92□□□□□ -0.66
PDPN-212ENST00000621990 BECN2A8MW95 431 aa10.92□□□□□ -0.66
PDPN-212ENST00000621990 DPCR1Q3MIW9 517 aa10.92□□□□□ -0.66
PDPN-212ENST00000621990 NBPF11Q86T75 865 aa10.92□□□□□ -0.66
PDPN-212ENST00000621990 TMTC2Q8N394 836 aa10.92□□□□□ -0.66
PDPN-212ENST00000621990 MAP7D2Q96T17 732 aa10.92□□□□□ -0.66
PDPN-212ENST00000621990 RNF41Q9H4P4 317 aaPredicted RBP10.92□□□□□ -0.66
PDPN-212ENST00000621990 DUOX1Q9NRD9 1551 aa10.92□□□□□ -0.66
PDPN-212ENST00000621990 ADAMTS2O95450 1211 aa10.92□□□□□ -0.66
PDPN-212ENST00000621990 TDO2P48775 406 aa10.92□□□□□ -0.66
PDPN-212ENST00000621990 SSRP1Q08945 709 aaKnown RBP10.92□□□□□ -0.66
PDPN-212ENST00000621990 UBE4AQ14139 1066 aa10.92□□□□□ -0.66
PDPN-212ENST00000621990 SART3Q15020 963 aaKnown RBP10.92□□□□□ -0.66
PDPN-212ENST00000621990 RESP18Q5W5W9 173 aa10.92□□□□□ -0.66
PDPN-212ENST00000621990 SHC4Q6S5L8 630 aa10.92□□□□□ -0.66
PDPN-212ENST00000621990 ADGRA1Q86SQ6 560 aa10.92□□□□□ -0.66
PDPN-212ENST00000621990 LRRC8AQ8IWT6 810 aa10.92□□□□□ -0.66
PDPN-212ENST00000621990 ELOA2Q8IYF1 753 aaPredicted RBP10.92□□□□□ -0.66
PDPN-212ENST00000621990 AOPEPQ8N6M6 819 aa10.92□□□□□ -0.66
PDPN-212ENST00000621990 BSDC1Q9NW68 430 aaPredicted RBP10.92□□□□□ -0.66
PDPN-212ENST00000621990 TUBE1Q9UJT0 475 aa10.92□□□□□ -0.66
PDPN-212ENST00000621990 A0A087WWV3 80 aa10.91□□□□□ -0.66
PDPN-212ENST00000621990 SLC3A2P08195 630 aaKnown RBP10.91□□□□□ -0.66
PDPN-212ENST00000621990 NLRP12P59046 1061 aa10.91□□□□□ -0.66
PDPN-212ENST00000621990 TRIM29Q14134 588 aa10.91□□□□□ -0.66
PDPN-212ENST00000621990 ERCC4Q92889 916 aaPredicted RBP10.91□□□□□ -0.66
PDPN-212ENST00000621990 MYL10Q9BUA6 226 aa10.91□□□□□ -0.66
PDPN-212ENST00000621990 LRP2BPQ9P2M1 347 aa10.91□□□□□ -0.66
PDPN-212ENST00000621990 TAF1P21675 1872 aa10.91□□□□□ -0.66
PDPN-212ENST00000621990 ZBTB22O15209 634 aa10.91□□□□□ -0.66
PDPN-212ENST00000621990 MMP1P03956 469 aa10.91□□□□□ -0.66
PDPN-212ENST00000621990 PPARAQ07869 468 aa10.91□□□□□ -0.66
PDPN-212ENST00000621990 SLC10A5Q5PT55 438 aa10.91□□□□□ -0.66
PDPN-212ENST00000621990 MTERF4Q7Z6M4 381 aaKnown RBP10.91□□□□□ -0.66
PDPN-212ENST00000621990 NOSTRINQ8IVI9 506 aa10.91□□□□□ -0.66
PDPN-212ENST00000621990 RIOK1Q9BRS2 568 aaKnown RBP10.91□□□□□ -0.66
PDPN-212ENST00000621990 KCND1Q9NSA2 647 aa10.91□□□□□ -0.66
PDPN-212ENST00000621990 PDS5AQ29RF7 1337 aaKnown RBP10.9□□□□□ -0.66
PDPN-212ENST00000621990 CNTNAP4Q9C0A0 1308 aa10.9□□□□□ -0.66
PDPN-212ENST00000621990 CUTAO60888 179 aa10.9□□□□□ -0.66
PDPN-212ENST00000621990 WTAPQ15007 396 aa10.9□□□□□ -0.66
PDPN-212ENST00000621990 PPP2R5BQ15173 497 aa10.9□□□□□ -0.66
PDPN-212ENST00000621990 RTN1Q16799 776 aa10.9□□□□□ -0.66
PDPN-212ENST00000621990 C3orf67Q6ZVT6 689 aa10.9□□□□□ -0.66
PDPN-212ENST00000621990 LINC00116Q8NCU8 138 aa10.9□□□□□ -0.66
PDPN-212ENST00000621990 SLC26A6Q9BXS9 759 aa10.9□□□□□ -0.66
PDPN-212ENST00000621990 OSBPL5Q9H0X9 879 aaPredicted RBP10.9□□□□□ -0.66
PDPN-212ENST00000621990 FOXP1Q9H334 677 aaPredicted RBP10.9□□□□□ -0.66
PDPN-212ENST00000621990 GNL3LQ9NVN8 582 aaKnown RBP10.9□□□□□ -0.66
PDPN-212ENST00000621990 MORC2Q9Y6X9 1032 aaPredicted RBP10.9□□□□□ -0.66
PDPN-212ENST00000621990 MAST2Q6P0Q8 1798 aa10.9□□□□□ -0.66
PDPN-212ENST00000621990 CCDC196A0A1B0GTZ2 297 aa10.9□□□□□ -0.66
PDPN-212ENST00000621990 IKBKBO14920 756 aa10.9□□□□□ -0.66
PDPN-212ENST00000621990 FGRP09769 529 aa10.9□□□□□ -0.66
PDPN-212ENST00000621990 MARCKSP29966 332 aaPredicted RBP10.9□□□□□ -0.66
PDPN-212ENST00000621990 SYKP43405 635 aa10.9□□□□□ -0.66
PDPN-212ENST00000621990 NCAPHQ15003 741 aa10.9□□□□□ -0.66
PDPN-212ENST00000621990 SEC23AQ15436 765 aa10.9□□□□□ -0.66
PDPN-212ENST00000621990 ERFEQ4G0M1 354 aa10.9□□□□□ -0.66
PDPN-212ENST00000621990 ANKRD18AQ8IVF6 992 aa10.9□□□□□ -0.66
PDPN-212ENST00000621990 CRACR2BQ8N4Y2 399 aaPredicted RBP10.9□□□□□ -0.66
PDPN-212ENST00000621990 MIGA1Q8NAN2 632 aa10.9□□□□□ -0.66
PDPN-212ENST00000621990 IMPACTQ9P2X3 320 aa10.9□□□□□ -0.66
PDPN-212ENST00000621990 KIAA1551Q9HCM1 1747 aa10.89□□□□□ -0.67
PDPN-212ENST00000621990 MYH6P13533 1939 aa10.89□□□□□ -0.67
PDPN-212ENST00000621990 MYH13Q9UKX3 1938 aa10.89□□□□□ -0.67
PDPN-212ENST00000621990 LAMB1P07942 1786 aa10.89□□□□□ -0.67
PDPN-212ENST00000621990 UBE2Q2LH0YL09 131 aa10.89□□□□□ -0.67
PDPN-212ENST00000621990 KCNQ2O43526 872 aa10.89□□□□□ -0.67
PDPN-212ENST00000621990 PCP11498 1178 aaKnown RBP10.89□□□□□ -0.67
PDPN-212ENST00000621990 CYP7A1P22680 504 aa10.89□□□□□ -0.67
PDPN-212ENST00000621990 BRIP1Q9BX63 1249 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms