RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 PCDHB15Q9Y5E8 787 aa19.73■□□□□ 0.75
CD40-207ENST00000620709 MECOMQ03112 1051 aa19.72■□□□□ 0.75
CD40-207ENST00000620709 SPATA5Q8NB90 893 aa19.72■□□□□ 0.75
CD40-207ENST00000620709 RAI14Q9P0K7 980 aa19.72■□□□□ 0.75
CD40-207ENST00000620709 GAKO14976 1311 aa19.72■□□□□ 0.75
CD40-207ENST00000620709 PDS5AQ29RF7 1337 aaKnown RBP19.72■□□□□ 0.75
CD40-207ENST00000620709 BTBD19C9JJ37 291 aa19.71■□□□□ 0.75
CD40-207ENST00000620709 ECM2O94769 699 aaPredicted RBP19.71■□□□□ 0.75
CD40-207ENST00000620709 PPATQ06203 517 aa19.71■□□□□ 0.75
CD40-207ENST00000620709 PTPN22Q9Y2R2 807 aa19.71■□□□□ 0.75
CD40-207ENST00000620709 MROH7-TTC4A0A0A0MT08 1334 aa19.71■□□□□ 0.75
CD40-207ENST00000620709 SURF6O75683 361 aaKnown RBP19.71■□□□□ 0.75
CD40-207ENST00000620709 RWDD1Q9H446 243 aaPredicted RBP19.71■□□□□ 0.75
CD40-207ENST00000620709 ENTPD3O75355 529 aa19.7■□□□□ 0.74
CD40-207ENST00000620709 ATP8B2P98198 1209 aa19.7■□□□□ 0.74
CD40-207ENST00000620709 TTC39AQ5SRH9 613 aa19.7■□□□□ 0.74
CD40-207ENST00000620709 IDI2Q9BXS1 227 aa19.7■□□□□ 0.74
CD40-207ENST00000620709 SNRKQ9NRH2 765 aa19.7■□□□□ 0.74
CD40-207ENST00000620709 ZNF112Q9UJU3 913 aa19.7■□□□□ 0.74
CD40-207ENST00000620709 DOCK2Q92608 1830 aa19.69■□□□□ 0.74
CD40-207ENST00000620709 UQCRFS1P1P0C7P4 283 aa19.69■□□□□ 0.74
CD40-207ENST00000620709 GSTO1P78417 241 aa19.69■□□□□ 0.74
CD40-207ENST00000620709 ARHGEF6Q15052 776 aa19.69■□□□□ 0.74
CD40-207ENST00000620709 DDX4Q9NQI0 724 aaKnown RBP19.69■□□□□ 0.74
CD40-207ENST00000620709 LRP2BPQ9P2M1 347 aa19.69■□□□□ 0.74
CD40-207ENST00000620709 ZBTB22O15209 634 aa19.68■□□□□ 0.74
CD40-207ENST00000620709 IGHDP01880 384 aa19.68■□□□□ 0.74
CD40-207ENST00000620709 LDHCP07864 332 aa19.68■□□□□ 0.74
CD40-207ENST00000620709 SLURP2P0DP57 97 aa19.68■□□□□ 0.74
CD40-207ENST00000620709 ARID4AP29374 1257 aaPredicted RBP19.68■□□□□ 0.74
CD40-207ENST00000620709 CAP1Q01518 475 aa19.68■□□□□ 0.74
CD40-207ENST00000620709 POLA2Q14181 598 aa19.68■□□□□ 0.74
CD40-207ENST00000620709 SH3BP5LQ7L8J4 393 aa19.68■□□□□ 0.74
CD40-207ENST00000620709 FAM163AQ96GL9 167 aaPredicted RBP19.68■□□□□ 0.74
CD40-207ENST00000620709 PICK1Q9NRD5 415 aa19.68■□□□□ 0.74
CD40-207ENST00000620709 HTTP42858 3142 aa19.68■□□□□ 0.74
CD40-207ENST00000620709 DDTLA6NHG4 134 aaPredicted RBP19.67■□□□□ 0.74
CD40-207ENST00000620709 MCAMP43121 646 aa19.67■□□□□ 0.74
CD40-207ENST00000620709 HDAC1Q13547 482 aaPredicted RBP19.67■□□□□ 0.74
CD40-207ENST00000620709 KIF22Q14807 665 aa19.67■□□□□ 0.74
CD40-207ENST00000620709 TNNI3KQ59H18 835 aa19.67■□□□□ 0.74
CD40-207ENST00000620709 CCDC158Q5M9N0 1113 aa19.67■□□□□ 0.74
CD40-207ENST00000620709 FPGT-TNNI3KV9GXZ4 949 aa19.67■□□□□ 0.74
CD40-207ENST00000620709 CENPFP49454 3210 aa19.67■□□□□ 0.74
CD40-207ENST00000620709 GPR75-ASB3A0A0A6YYF3 556 aa19.66■□□□□ 0.74
CD40-207ENST00000620709 PDHXO00330 501 aa19.66■□□□□ 0.74
CD40-207ENST00000620709 TLR2O60603 784 aa19.66■□□□□ 0.74
CD40-207ENST00000620709 NOL9Q5SY16 702 aaKnown RBP19.66■□□□□ 0.74
CD40-207ENST00000620709 SSH3Q8TE77 659 aa19.66■□□□□ 0.74
CD40-207ENST00000620709 ZNF384Q8TF68 577 aa19.66■□□□□ 0.74
CD40-207ENST00000620709 NSUN4Q96CB9 384 aaKnown RBP19.66■□□□□ 0.74
CD40-207ENST00000620709 DBNDD2Q9BQY9 259 aa19.66■□□□□ 0.74
CD40-207ENST00000620709 SCYL3Q8IZE3 742 aa19.66■□□□□ 0.74
CD40-207ENST00000620709 NOL10Q9BSC4 688 aaKnown RBP19.66■□□□□ 0.74
CD40-207ENST00000620709 ZCCHC17Q9NP64 241 aaKnown RBP19.66■□□□□ 0.74
CD40-207ENST00000620709 CPA4Q9UI42 421 aa19.66■□□□□ 0.74
CD40-207ENST00000620709 ZHX2Q9Y6X8 837 aa19.66■□□□□ 0.74
CD40-207ENST00000620709 RHBDL3P58872 404 aa19.65■□□□□ 0.74
CD40-207ENST00000620709 ANKRD23Q86SG2 305 aa19.65■□□□□ 0.74
CD40-207ENST00000620709 ARHGAP39Q9C0H5 1083 aa19.65■□□□□ 0.74
CD40-207ENST00000620709 KCNH4Q9UQ05 1017 aa19.65■□□□□ 0.74
CD40-207ENST00000620709 PHF20L1A8MW92 1017 aa19.64■□□□□ 0.73
CD40-207ENST00000620709 GADL1Q6ZQY3 521 aa19.64■□□□□ 0.73
CD40-207ENST00000620709 TEX11Q8IYF3 940 aa19.64■□□□□ 0.73
CD40-207ENST00000620709 GPR108Q9NPR9 543 aa19.64■□□□□ 0.73
CD40-207ENST00000620709 RFX7Q2KHR2 1363 aa19.64■□□□□ 0.73
CD40-207ENST00000620709 ATRNL1Q5VV63 1379 aa19.64■□□□□ 0.73
CD40-207ENST00000620709 PDE4DIPQ5VU43 2346 aa19.64■□□□□ 0.73
CD40-207ENST00000620709 FAM196BA6NMK8 535 aa19.63■□□□□ 0.73
CD40-207ENST00000620709 MYCP01106 439 aaPredicted RBP19.63■□□□□ 0.73
CD40-207ENST00000620709 LACTBP83111 547 aaPredicted RBP19.63■□□□□ 0.73
CD40-207ENST00000620709 NAA16Q6N069 864 aaPredicted RBP19.63■□□□□ 0.73
CD40-207ENST00000620709 CCDC8Q9H0W5 538 aaPredicted RBP19.63■□□□□ 0.73
CD40-207ENST00000620709 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.63■□□□□ 0.73
CD40-207ENST00000620709 PTCH2Q9Y6C5 1203 aa19.63■□□□□ 0.73
CD40-207ENST00000620709 ZSWIM8A7E2V4 1837 aa19.63■□□□□ 0.73
CD40-207ENST00000620709 POTEFA5A3E0 1075 aa19.62■□□□□ 0.73
CD40-207ENST00000620709 SLC9C1Q4G0N8 1177 aa19.62■□□□□ 0.73
CD40-207ENST00000620709 SH3RF3Q8TEJ3 882 aaPredicted RBP19.62■□□□□ 0.73
CD40-207ENST00000620709 CXCL11O14625 94 aa19.61■□□□□ 0.73
CD40-207ENST00000620709 PTPRAP18433 802 aa19.61■□□□□ 0.73
CD40-207ENST00000620709 CCDC84Q86UT8 332 aaPredicted RBP19.61■□□□□ 0.73
CD40-207ENST00000620709 BCL11AQ9H165 835 aa19.61■□□□□ 0.73
CD40-207ENST00000620709 AATFQ9NY61 560 aaKnown RBP eCLIP19.61■□□□□ 0.73
CD40-207ENST00000620709 TLR7Q9NYK1 1049 aaKnown RBP19.61■□□□□ 0.73
CD40-207ENST00000620709 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.61■□□□□ 0.73
CD40-207ENST00000620709 TRIM75PA6NK02 468 aa19.61■□□□□ 0.73
CD40-207ENST00000620709 CTNND1O60716 968 aaKnown RBP19.61■□□□□ 0.73
CD40-207ENST00000620709 MOGSQ13724 837 aa19.61■□□□□ 0.73
CD40-207ENST00000620709 CEP85Q6P2H3 762 aa19.61■□□□□ 0.73
CD40-207ENST00000620709 NBPF11Q86T75 865 aa19.61■□□□□ 0.73
CD40-207ENST00000620709 TMEM106CQ9BVX2 250 aa19.61■□□□□ 0.73
CD40-207ENST00000620709 FMNL1O95466 1100 aaPredicted RBP19.6■□□□□ 0.73
CD40-207ENST00000620709 BAG3O95817 575 aa19.6■□□□□ 0.73
CD40-207ENST00000620709 CYP2E1P05181 493 aaPredicted RBP19.6■□□□□ 0.73
CD40-207ENST00000620709 CYP2C8P10632 490 aa19.6■□□□□ 0.73
CD40-207ENST00000620709 ZAP70P43403 619 aa19.6■□□□□ 0.73
CD40-207ENST00000620709 C17orf99Q6UX52 265 aa19.6■□□□□ 0.73
CD40-207ENST00000620709 RPAP2Q8IXW5 612 aaPredicted RBP19.6■□□□□ 0.73
CD40-207ENST00000620709 ARMC5Q96C12 935 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms