RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-215ENST00000619322 ECE2O60344 883 aa6.9□□□□□ -1.31
CBWD3-215ENST00000619322 RPS8P62241 208 aaKnown RBP6.9□□□□□ -1.31
CBWD3-215ENST00000619322 PPIL2Q13356 520 aa6.9□□□□□ -1.31
CBWD3-215ENST00000619322 DPP8Q6V1X1 898 aaPredicted RBP6.9□□□□□ -1.31
CBWD3-215ENST00000619322 RIC3Q7Z5B4 369 aa6.9□□□□□ -1.31
CBWD3-215ENST00000619322 ERO1AQ96HE7 468 aa6.9□□□□□ -1.31
CBWD3-215ENST00000619322 WWC3Q9ULE0 1092 aa6.9□□□□□ -1.31
CBWD3-215ENST00000619322 PLIN4Q96Q06 1357 aa6.9□□□□□ -1.31
CBWD3-215ENST00000619322 C6orf229H3BNL8 230 aa6.89□□□□□ -1.31
CBWD3-215ENST00000619322 GPSM2P81274 684 aa6.89□□□□□ -1.31
CBWD3-215ENST00000619322 BEND3Q5T5X7 828 aa6.89□□□□□ -1.31
CBWD3-215ENST00000619322 TTLL7Q6ZT98 887 aa6.89□□□□□ -1.31
CBWD3-215ENST00000619322 C12orf42Q96LP6 360 aa6.89□□□□□ -1.31
CBWD3-215ENST00000619322 GBA2Q9HCG7 927 aaPredicted RBP6.89□□□□□ -1.31
CBWD3-215ENST00000619322 GGA1Q9UJY5 639 aa6.89□□□□□ -1.31
CBWD3-215ENST00000619322 H7C1D1 291 aa6.89□□□□□ -1.31
CBWD3-215ENST00000619322 ENTPD3O75355 529 aa6.89□□□□□ -1.31
CBWD3-215ENST00000619322 CLK2P49760 499 aaKnown RBP6.89□□□□□ -1.31
CBWD3-215ENST00000619322 GMPSP49915 693 aaPredicted RBP6.89□□□□□ -1.31
CBWD3-215ENST00000619322 GCKRQ14397 625 aa6.89□□□□□ -1.31
CBWD3-215ENST00000619322 PLA2G2EQ9NZK7 142 aa6.89□□□□□ -1.31
CBWD3-215ENST00000619322 TSPYL4Q9UJ04 414 aa6.89□□□□□ -1.31
CBWD3-215ENST00000619322 IGKV5-2P06315 115 aa6.89□□□□□ -1.31
CBWD3-215ENST00000619322 PPP1R18Q6NYC8 613 aa6.89□□□□□ -1.31
CBWD3-215ENST00000619322 TNS4Q8IZW8 715 aa6.89□□□□□ -1.31
CBWD3-215ENST00000619322 CDCA5Q96FF9 252 aa6.89□□□□□ -1.31
CBWD3-215ENST00000619322 POLLQ9UGP5 575 aa6.89□□□□□ -1.31
CBWD3-215ENST00000619322 SPDYE5A6NIY4 337 aa6.88□□□□□ -1.31
CBWD3-215ENST00000619322 MOGSQ13724 837 aa6.88□□□□□ -1.31
CBWD3-215ENST00000619322 TNFAIP1Q13829 316 aa6.88□□□□□ -1.31
CBWD3-215ENST00000619322 KIF4BQ2VIQ3 1234 aa6.88□□□□□ -1.31
CBWD3-215ENST00000619322 TEPSINQ96N21 525 aa6.88□□□□□ -1.31
CBWD3-215ENST00000619322 RNF186Q9NXI6 227 aa6.88□□□□□ -1.31
CBWD3-215ENST00000619322 MYO5AQ9Y4I1 1855 aaKnown RBP6.88□□□□□ -1.31
CBWD3-215ENST00000619322 COL4A4P53420 1690 aaPredicted RBP6.88□□□□□ -1.31
CBWD3-215ENST00000619322 CTDSPL2Q05D32 466 aa6.88□□□□□ -1.31
CBWD3-215ENST00000619322 SPRYD7Q5W111 196 aa6.88□□□□□ -1.31
CBWD3-215ENST00000619322 COPS6Q7L5N1 327 aa6.88□□□□□ -1.31
CBWD3-215ENST00000619322 C2orf69Q8N8R5 385 aa6.88□□□□□ -1.31
CBWD3-215ENST00000619322 LRRN4Q8WUT4 740 aa6.88□□□□□ -1.31
CBWD3-215ENST00000619322 SPSB2Q99619 263 aa6.88□□□□□ -1.31
CBWD3-215ENST00000619322 TMX4Q9H1E5 349 aaPredicted RBP6.88□□□□□ -1.31
CBWD3-215ENST00000619322 ZBTB7CA1YPR0 619 aa6.87□□□□□ -1.31
CBWD3-215ENST00000619322 CXCL11O14625 94 aa6.87□□□□□ -1.31
CBWD3-215ENST00000619322 PTCD1O75127 700 aaKnown RBP6.87□□□□□ -1.31
CBWD3-215ENST00000619322 DDNO94850 711 aaPredicted RBP6.87□□□□□ -1.31
CBWD3-215ENST00000619322 HMOX1P09601 288 aa6.87□□□□□ -1.31
CBWD3-215ENST00000619322 U2AF1L5P0DN76 240 aaPredicted RBP6.87□□□□□ -1.31
CBWD3-215ENST00000619322 U2AF1Q01081 240 aaKnown RBP eCLIP6.87□□□□□ -1.31
CBWD3-215ENST00000619322 BRICD5Q6PL45 260 aa6.87□□□□□ -1.31
CBWD3-215ENST00000619322 WNK4Q96J92 1243 aa6.87□□□□□ -1.31
CBWD3-215ENST00000619322 MYOZ2Q9NPC6 264 aa6.87□□□□□ -1.31
CBWD3-215ENST00000619322 MORF4L1Q9UBU8 362 aa6.87□□□□□ -1.31
CBWD3-215ENST00000619322 HOXC6P09630 235 aa6.87□□□□□ -1.31
CBWD3-215ENST00000619322 RFX5P48382 616 aaPredicted RBP6.87□□□□□ -1.31
CBWD3-215ENST00000619322 KCNQ4P56696 695 aa6.87□□□□□ -1.31
CBWD3-215ENST00000619322 RIPK4P57078 832 aa6.87□□□□□ -1.31
CBWD3-215ENST00000619322 CCDC184Q52MB2 194 aa6.87□□□□□ -1.31
CBWD3-215ENST00000619322 DUSP27Q5VZP5 1158 aa6.87□□□□□ -1.31
CBWD3-215ENST00000619322 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.87□□□□□ -1.31
CBWD3-215ENST00000619322 XAGE3Q8WTP9 111 aa6.87□□□□□ -1.31
CBWD3-215ENST00000619322 EHD4Q9H223 541 aa6.87□□□□□ -1.31
CBWD3-215ENST00000619322 MINPP1Q9UNW1 487 aa6.87□□□□□ -1.31
CBWD3-215ENST00000619322 LOXHD1Q8IVV2 1947 aa6.87□□□□□ -1.31
CBWD3-215ENST00000619322 RNF223E7ERA6 249 aa6.86□□□□□ -1.31
CBWD3-215ENST00000619322 CANXP27824 592 aaKnown RBP6.86□□□□□ -1.31
CBWD3-215ENST00000619322 PPATQ06203 517 aa6.86□□□□□ -1.31
CBWD3-215ENST00000619322 OSBPL5Q9H0X9 879 aaPredicted RBP6.86□□□□□ -1.31
CBWD3-215ENST00000619322 HDAC9Q9UKV0 1011 aa6.86□□□□□ -1.31
CBWD3-215ENST00000619322 RIPOR2Q9Y4F9 1068 aa6.86□□□□□ -1.31
CBWD3-215ENST00000619322 PSMD14O00487 310 aa6.86□□□□□ -1.31
CBWD3-215ENST00000619322 PPIP5K2O43314 1243 aa6.86□□□□□ -1.31
CBWD3-215ENST00000619322 VAMP4O75379 141 aa6.86□□□□□ -1.31
CBWD3-215ENST00000619322 KMT5BQ4FZB7 885 aa6.86□□□□□ -1.31
CBWD3-215ENST00000619322 MAP10Q9P2G4 905 aa6.86□□□□□ -1.31
CBWD3-215ENST00000619322 IRS4O14654 1257 aaPredicted RBP6.86□□□□□ -1.31
CBWD3-215ENST00000619322 CCT4P50991 539 aaKnown RBP6.86□□□□□ -1.31
CBWD3-215ENST00000619322 PTCRAQ6ISU1 281 aaPredicted RBP6.86□□□□□ -1.31
CBWD3-215ENST00000619322 ARMC9Q7Z3E5 817 aa6.86□□□□□ -1.31
CBWD3-215ENST00000619322 ZGPATQ8N5A5 531 aaKnown RBP6.86□□□□□ -1.31
CBWD3-215ENST00000619322 DDRGK1Q96HY6 314 aa6.86□□□□□ -1.31
CBWD3-215ENST00000619322 CNOT7Q9UIV1 285 aaKnown RBP6.86□□□□□ -1.31
CBWD3-215ENST00000619322 ZBED9Q6R2W3 1325 aa6.86□□□□□ -1.31
CBWD3-215ENST00000619322 SUPT20HL1Q3ZLR7 823 aa6.85□□□□□ -1.31
CBWD3-215ENST00000619322 MCM10Q7L590 875 aa6.85□□□□□ -1.31
CBWD3-215ENST00000619322 ANKRD18AQ8IVF6 992 aa6.85□□□□□ -1.31
CBWD3-215ENST00000619322 LARGE2Q8N3Y3 721 aa6.85□□□□□ -1.31
CBWD3-215ENST00000619322 MSL3Q8N5Y2 521 aaKnown RBP6.85□□□□□ -1.31
CBWD3-215ENST00000619322 SPTLC1O15269 473 aa6.85□□□□□ -1.31
CBWD3-215ENST00000619322 ARID4AP29374 1257 aaPredicted RBP6.85□□□□□ -1.31
CBWD3-215ENST00000619322 WASHC4Q2M389 1173 aa6.85□□□□□ -1.31
CBWD3-215ENST00000619322 COL13A1Q5TAT6 717 aaPredicted RBP6.85□□□□□ -1.31
CBWD3-215ENST00000619322 ZNF333Q96JL9 665 aa6.85□□□□□ -1.31
CBWD3-215ENST00000619322 COPRSQ9NQ92 184 aa6.85□□□□□ -1.31
CBWD3-215ENST00000619322 ZMYM6O95789 1325 aa6.84□□□□□ -1.31
CBWD3-215ENST00000619322 USP17L8P0C7I0 530 aa6.84□□□□□ -1.31
CBWD3-215ENST00000619322 SIP14410 1827 aa6.84□□□□□ -1.31
CBWD3-215ENST00000619322 AAMPQ13685 434 aa6.84□□□□□ -1.31
CBWD3-215ENST00000619322 SNX17Q15036 470 aa6.84□□□□□ -1.31
CBWD3-215ENST00000619322 ZNF804AQ7Z570 1209 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms