RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 METTL16Q86W50 562 aaKnown RBP10.04□□□□□ -0.8
NEK3-209ENST00000618856 ANKRD13AQ8IZ07 590 aa10.04□□□□□ -0.8
NEK3-209ENST00000618856 SH3RF3Q8TEJ3 882 aaPredicted RBP10.04□□□□□ -0.8
NEK3-209ENST00000618856 BOLA2Q9H3K6 86 aa10.04□□□□□ -0.8
NEK3-209ENST00000618856 RWDD1Q9H446 243 aaPredicted RBP10.04□□□□□ -0.8
NEK3-209ENST00000618856 PAG1Q9NWQ8 432 aa10.04□□□□□ -0.8
NEK3-209ENST00000618856 STAP2Q9UGK3 403 aa10.04□□□□□ -0.8
NEK3-209ENST00000618856 CDK5RAP2Q96SN8 1893 aa10.04□□□□□ -0.8
NEK3-209ENST00000618856 DDTLA6NHG4 134 aaPredicted RBP10.03□□□□□ -0.8
NEK3-209ENST00000618856 PHF20L1A8MW92 1017 aa10.03□□□□□ -0.8
NEK3-209ENST00000618856 GOLIM4O00461 696 aa10.03□□□□□ -0.8
NEK3-209ENST00000618856 IDH1O75874 414 aaKnown RBP10.03□□□□□ -0.8
NEK3-209ENST00000618856 HSPA1AP0DMV8 641 aaKnown RBP10.03□□□□□ -0.8
NEK3-209ENST00000618856 HSPA1BP0DMV9 641 aaKnown RBP10.03□□□□□ -0.8
NEK3-209ENST00000618856 ZBTB48P10074 688 aaPredicted RBP10.03□□□□□ -0.8
NEK3-209ENST00000618856 PDE6AP16499 860 aa10.03□□□□□ -0.8
NEK3-209ENST00000618856 PLCG2P16885 1265 aa10.03□□□□□ -0.8
NEK3-209ENST00000618856 ADD2P35612 726 aa10.03□□□□□ -0.8
NEK3-209ENST00000618856 IREB2P48200 963 aaKnown RBP10.03□□□□□ -0.8
NEK3-209ENST00000618856 TM4SF4P48230 202 aa10.03□□□□□ -0.8
NEK3-209ENST00000618856 MAP3K9P80192 1104 aa10.03□□□□□ -0.8
NEK3-209ENST00000618856 KIF23Q02241 960 aaPredicted RBP10.03□□□□□ -0.8
NEK3-209ENST00000618856 SPRYD7Q5W111 196 aa10.03□□□□□ -0.8
NEK3-209ENST00000618856 MAGEB6Q8N7X4 407 aa10.03□□□□□ -0.8
NEK3-209ENST00000618856 OTUD7AQ8TE49 926 aaPredicted RBP10.03□□□□□ -0.8
NEK3-209ENST00000618856 EDC3Q96F86 508 aaKnown RBP10.03□□□□□ -0.8
NEK3-209ENST00000618856 CLMNQ96JQ2 1002 aa10.03□□□□□ -0.8
NEK3-209ENST00000618856 CSRNP1Q96S65 589 aa10.03□□□□□ -0.8
NEK3-209ENST00000618856 OSBPL5Q9H0X9 879 aaPredicted RBP10.03□□□□□ -0.8
NEK3-209ENST00000618856 AATFQ9NY61 560 aaKnown RBP eCLIP10.03□□□□□ -0.8
NEK3-209ENST00000618856 SIPA1L1O43166 1804 aa10.03□□□□□ -0.8
NEK3-209ENST00000618856 DDX60LQ5H9U9 1706 aaKnown RBP10.02□□□□□ -0.8
NEK3-209ENST00000618856 TESPA1A2RU30 521 aaPredicted RBP10.02□□□□□ -0.81
NEK3-209ENST00000618856 CYP7A1P22680 504 aa10.02□□□□□ -0.81
NEK3-209ENST00000618856 GJA5P36382 358 aa10.02□□□□□ -0.81
NEK3-209ENST00000618856 NUCB1Q02818 461 aa10.02□□□□□ -0.81
NEK3-209ENST00000618856 TCP10Q12799 353 aa10.02□□□□□ -0.81
NEK3-209ENST00000618856 PRKG1Q13976 671 aa10.02□□□□□ -0.81
NEK3-209ENST00000618856 VGLL4Q14135 290 aa10.02□□□□□ -0.81
NEK3-209ENST00000618856 TTLL12Q14166 644 aaPredicted RBP10.02□□□□□ -0.81
NEK3-209ENST00000618856 UBE3CQ15386 1083 aa10.02□□□□□ -0.81
NEK3-209ENST00000618856 NOL9Q5SY16 702 aaKnown RBP10.02□□□□□ -0.81
NEK3-209ENST00000618856 SLC9C2Q5TAH2 1124 aa10.02□□□□□ -0.81
NEK3-209ENST00000618856 DCAF15Q66K64 600 aa10.02□□□□□ -0.81
NEK3-209ENST00000618856 TEX11Q8IYF3 940 aa10.02□□□□□ -0.81
NEK3-209ENST00000618856 DNAJC2Q99543 621 aaKnown RBP10.02□□□□□ -0.81
NEK3-209ENST00000618856 ZNF341Q9BYN7 854 aa10.02□□□□□ -0.81
NEK3-209ENST00000618856 SNCAIPQ9Y6H5 919 aa10.02□□□□□ -0.81
NEK3-209ENST00000618856 FLT1P17948 1338 aa10.02□□□□□ -0.81
NEK3-209ENST00000618856 ZNF532Q9HCE3 1301 aa10.02□□□□□ -0.81
NEK3-209ENST00000618856 SPDYE5A6NIY4 337 aa10.01□□□□□ -0.81
NEK3-209ENST00000618856 FOXN1O15353 648 aa10.01□□□□□ -0.81
NEK3-209ENST00000618856 CA12O43570 354 aa10.01□□□□□ -0.81
NEK3-209ENST00000618856 GLRX3O76003 335 aaKnown RBP10.01□□□□□ -0.81
NEK3-209ENST00000618856 MX1P20591 662 aa10.01□□□□□ -0.81
NEK3-209ENST00000618856 DYNLL1P63167 89 aaKnown RBP10.01□□□□□ -0.81
NEK3-209ENST00000618856 ANKRD45Q5TZF3 282 aa10.01□□□□□ -0.81
NEK3-209ENST00000618856 TICAM2Q86XR7 235 aa10.01□□□□□ -0.81
NEK3-209ENST00000618856 KBTBD3Q8NAB2 608 aa10.01□□□□□ -0.81
NEK3-209ENST00000618856 SLC10A4Q96EP9 437 aa10.01□□□□□ -0.81
NEK3-209ENST00000618856 GPATCH3Q96I76 525 aa10.01□□□□□ -0.81
NEK3-209ENST00000618856 WNK4Q96J92 1243 aa10.01□□□□□ -0.81
NEK3-209ENST00000618856 CFHR5Q9BXR6 569 aa10.01□□□□□ -0.81
NEK3-209ENST00000618856 DHX36Q9H2U1 1008 aaKnown RBP10.01□□□□□ -0.81
NEK3-209ENST00000618856 OSBPL3Q9H4L5 887 aa10.01□□□□□ -0.81
NEK3-209ENST00000618856 SAGE1Q9NXZ1 904 aa10.01□□□□□ -0.81
NEK3-209ENST00000618856 PDE1AP54750 535 aa10□□□□□ -0.81
NEK3-209ENST00000618856 INHBEP58166 350 aa10□□□□□ -0.81
NEK3-209ENST00000618856 PICALMQ13492 652 aa10□□□□□ -0.81
NEK3-209ENST00000618856 TSHZ3Q63HK5 1081 aa10□□□□□ -0.81
NEK3-209ENST00000618856 PAXIP1Q6ZW49 1069 aaPredicted RBP10□□□□□ -0.81
NEK3-209ENST00000618856 MIGA2Q7L4E1 593 aa10□□□□□ -0.81
NEK3-209ENST00000618856 TGFBRAP1Q8WUH2 860 aa10□□□□□ -0.81
NEK3-209ENST00000618856 MS4A4AQ96JQ5 239 aa10□□□□□ -0.81
NEK3-209ENST00000618856 WRNIP1Q96S55 665 aa10□□□□□ -0.81
NEK3-209ENST00000618856 NOL10Q9BSC4 688 aaKnown RBP10□□□□□ -0.81
NEK3-209ENST00000618856 MYH7P12883 1935 aa9.99□□□□□ -0.81
NEK3-209ENST00000618856 MAGEB6P1A0A0J9YX57 407 aa9.99□□□□□ -0.81
NEK3-209ENST00000618856 MANSC4A6NHS7 340 aaPredicted RBP9.99□□□□□ -0.81
NEK3-209ENST00000618856 ERC2O15083 957 aa9.99□□□□□ -0.81
NEK3-209ENST00000618856 CHGBP05060 677 aa9.99□□□□□ -0.81
NEK3-209ENST00000618856 SLURP2P0DP57 97 aa9.99□□□□□ -0.81
NEK3-209ENST00000618856 HSPA8P11142 646 aaKnown RBP9.99□□□□□ -0.81
NEK3-209ENST00000618856 INPP5BP32019 993 aa9.99□□□□□ -0.81
NEK3-209ENST00000618856 PPATQ06203 517 aa9.99□□□□□ -0.81
NEK3-209ENST00000618856 ZSCAN25Q6NSZ9 544 aa9.99□□□□□ -0.81
NEK3-209ENST00000618856 CHD1LQ86WJ1 897 aa9.99□□□□□ -0.81
NEK3-209ENST00000618856 ERO1BQ86YB8 467 aa9.99□□□□□ -0.81
NEK3-209ENST00000618856 FOXP4Q8IVH2 680 aaPredicted RBP9.99□□□□□ -0.81
NEK3-209ENST00000618856 MIGA1Q8NAN2 632 aa9.99□□□□□ -0.81
NEK3-209ENST00000618856 ZKSCAN4Q969J2 545 aaPredicted RBP9.99□□□□□ -0.81
NEK3-209ENST00000618856 OPTNQ96CV9 577 aa9.99□□□□□ -0.81
NEK3-209ENST00000618856 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.99□□□□□ -0.81
NEK3-209ENST00000618856 EHD4Q9H223 541 aa9.99□□□□□ -0.81
NEK3-209ENST00000618856 DNAJC18Q9H819 358 aa9.99□□□□□ -0.81
NEK3-209ENST00000618856 ELP3Q9H9T3 547 aa9.99□□□□□ -0.81
NEK3-209ENST00000618856 PI4KBQ9UBF8 816 aa9.99□□□□□ -0.81
NEK3-209ENST00000618856 HERC5Q9UII4 1024 aaKnown RBP9.99□□□□□ -0.81
NEK3-209ENST00000618856 TAOK2Q9UL54 1235 aa9.99□□□□□ -0.81
NEK3-209ENST00000618856 CTNND1O60716 968 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms