RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 SMARCC2Q8TAQ2 1214 aa29.65■■■□□ 2.34
VEGFC-202ENST00000618562 NCOA5Q9HCD5 579 aaKnown RBP29.65■■■□□ 2.34
VEGFC-202ENST00000618562 EIF2AK3Q9NZJ5 1116 aaKnown RBP29.65■■■□□ 2.34
VEGFC-202ENST00000618562 NAP1L2Q9ULW6 460 aaPredicted RBP29.65■■■□□ 2.34
VEGFC-202ENST00000618562 CTDNEP1O95476 244 aa29.64■■■□□ 2.34
VEGFC-202ENST00000618562 NSUN7Q8NE18 718 aaKnown RBP29.64■■■□□ 2.34
VEGFC-202ENST00000618562 IGSF3O75054 1194 aa29.64■■■□□ 2.33
VEGFC-202ENST00000618562 PPARAQ07869 468 aa29.64■■■□□ 2.33
VEGFC-202ENST00000618562 MFSD6Q6ZSS7 791 aa29.63■■■□□ 2.33
VEGFC-202ENST00000618562 CNNM2Q9H8M5 875 aa29.63■■■□□ 2.33
VEGFC-202ENST00000618562 KLF18A0A0U1RQI7 1052 aa29.62■■■□□ 2.33
VEGFC-202ENST00000618562 DEFB132Q7Z7B7 95 aa29.62■■■□□ 2.33
VEGFC-202ENST00000618562 ANAPC4Q9UJX5 808 aa29.62■■■□□ 2.33
VEGFC-202ENST00000618562 ANGEL1Q9UNK9 670 aaKnown RBP29.62■■■□□ 2.33
VEGFC-202ENST00000618562 SH2B2O14492 632 aaPredicted RBP29.62■■■□□ 2.33
VEGFC-202ENST00000618562 TPRNQ4KMQ1 711 aa29.62■■■□□ 2.33
VEGFC-202ENST00000618562 HPS5Q9UPZ3 1129 aa29.62■■■□□ 2.33
VEGFC-202ENST00000618562 GIMAP6Q6P9H5 292 aa29.61■■■□□ 2.33
VEGFC-202ENST00000618562 KRT23Q9C075 422 aa29.61■■■□□ 2.33
VEGFC-202ENST00000618562 ZSCAN16Q9H4T2 348 aaPredicted RBP29.61■■■□□ 2.33
VEGFC-202ENST00000618562 ZSWIM5Q9P217 1185 aa29.61■■■□□ 2.33
VEGFC-202ENST00000618562 KDM4AO75164 1064 aa29.6■■■□□ 2.33
VEGFC-202ENST00000618562 OFD1O75665 1012 aa29.6■■■□□ 2.33
VEGFC-202ENST00000618562 BAG6P46379 1132 aa29.6■■■□□ 2.33
VEGFC-202ENST00000618562 C2CD5Q86YS7 1000 aa29.6■■■□□ 2.33
VEGFC-202ENST00000618562 DDX11Q96FC9 970 aa29.6■■■□□ 2.33
VEGFC-202ENST00000618562 TMEM87BQ96K49 555 aa29.6■■■□□ 2.33
VEGFC-202ENST00000618562 SPATA32Q96LK8 384 aa29.6■■■□□ 2.33
VEGFC-202ENST00000618562 MINDY4BA8MYZ0 360 aa29.6■■■□□ 2.33
VEGFC-202ENST00000618562 SMIM22K7EJ46 135 aa29.6■■■□□ 2.33
VEGFC-202ENST00000618562 SF3B2Q13435 895 aaKnown RBP29.6■■■□□ 2.33
VEGFC-202ENST00000618562 FAM173BQ6P4H8 233 aa29.6■■■□□ 2.33
VEGFC-202ENST00000618562 MPNDQ8N594 471 aa29.6■■■□□ 2.33
VEGFC-202ENST00000618562 IGDCC4Q8TDY8 1250 aa29.6■■■□□ 2.33
VEGFC-202ENST00000618562 MYH2Q9UKX2 1941 aa29.6■■■□□ 2.33
VEGFC-202ENST00000618562 HMGN5P82970 282 aaKnown RBP29.59■■■□□ 2.33
VEGFC-202ENST00000618562 RESTQ13127 1097 aa29.59■■■□□ 2.33
VEGFC-202ENST00000618562 PDZRN4Q6ZMN7 1036 aaPredicted RBP29.59■■■□□ 2.33
VEGFC-202ENST00000618562 ZNF622Q969S3 477 aaKnown RBP eCLIP29.59■■■□□ 2.33
VEGFC-202ENST00000618562 CHMP4CQ96CF2 233 aa29.59■■■□□ 2.33
VEGFC-202ENST00000618562 CRNKL1Q9BZJ0 848 aaKnown RBP29.59■■■□□ 2.33
VEGFC-202ENST00000618562 KIF3AQ9Y496 699 aa29.59■■■□□ 2.33
VEGFC-202ENST00000618562 PTPDC1A2A3K4 754 aa29.59■■■□□ 2.33
VEGFC-202ENST00000618562 GOLGA8BA8MQT2 603 aa29.59■■■□□ 2.33
VEGFC-202ENST00000618562 STK11IPQ8N1F8 1099 aa29.59■■■□□ 2.33
VEGFC-202ENST00000618562 LEO1Q8WVC0 666 aaPredicted RBP29.59■■■□□ 2.33
VEGFC-202ENST00000618562 PDGFDQ9GZP0 370 aaPredicted RBP29.59■■■□□ 2.33
VEGFC-202ENST00000618562 DIXDC1Q155Q3 683 aa29.58■■■□□ 2.33
VEGFC-202ENST00000618562 RNF41Q9H4P4 317 aaPredicted RBP29.58■■■□□ 2.33
VEGFC-202ENST00000618562 SENP2Q9HC62 589 aa29.58■■■□□ 2.33
VEGFC-202ENST00000618562 LAMB1P07942 1786 aa29.58■■■□□ 2.33
VEGFC-202ENST00000618562 MYH15Q9Y2K3 1946 aa29.58■■■□□ 2.33
VEGFC-202ENST00000618562 CYP2D7A0A087X1C5 515 aa29.57■■■□□ 2.32
VEGFC-202ENST00000618562 H3BQV1 296 aa29.57■■■□□ 2.32
VEGFC-202ENST00000618562 RRP12Q5JTH9 1297 aaKnown RBP29.57■■■□□ 2.32
VEGFC-202ENST00000618562 IFFO2Q5TF58 517 aa29.57■■■□□ 2.32
VEGFC-202ENST00000618562 CTR9Q6PD62 1173 aa29.57■■■□□ 2.32
VEGFC-202ENST00000618562 DCP1AQ9NPI6 582 aaPredicted RBP29.57■■■□□ 2.32
VEGFC-202ENST00000618562 RIMBP2O15034 1052 aa29.57■■■□□ 2.32
VEGFC-202ENST00000618562 CCDC192P0DO97 292 aa29.57■■■□□ 2.32
VEGFC-202ENST00000618562 DPP8Q6V1X1 898 aaPredicted RBP29.57■■■□□ 2.32
VEGFC-202ENST00000618562 NUP62CLQ9H1M0 184 aa29.57■■■□□ 2.32
VEGFC-202ENST00000618562 LY9Q9HBG7 655 aa29.57■■■□□ 2.32
VEGFC-202ENST00000618562 GOLGA6L4A6NEF3 574 aa29.56■■■□□ 2.32
VEGFC-202ENST00000618562 H0YIN7 160 aa29.56■■■□□ 2.32
VEGFC-202ENST00000618562 PTMAP06454 111 aaKnown RBP29.56■■■□□ 2.32
VEGFC-202ENST00000618562 GSTO1P78417 241 aa29.56■■■□□ 2.32
VEGFC-202ENST00000618562 STYK1Q6J9G0 422 aa29.56■■■□□ 2.32
VEGFC-202ENST00000618562 RAB11FIP4Q86YS3 637 aa29.56■■■□□ 2.32
VEGFC-202ENST00000618562 TOMM22Q9NS69 142 aa29.56■■■□□ 2.32
VEGFC-202ENST00000618562 ATP8A2Q9NTI2 1148 aa29.56■■■□□ 2.32
VEGFC-202ENST00000618562 USP25Q9UHP3 1055 aa29.56■■■□□ 2.32
VEGFC-202ENST00000618562 SLX4Q8IY92 1834 aa29.56■■■□□ 2.32
VEGFC-202ENST00000618562 TMEM67Q5HYA8 995 aa29.55■■■□□ 2.32
VEGFC-202ENST00000618562 COA1Q9GZY4 146 aa29.55■■■□□ 2.32
VEGFC-202ENST00000618562 DDX19AQ9NUU7 478 aaKnown RBP29.55■■■□□ 2.32
VEGFC-202ENST00000618562 FAM205AQ6ZU69 1335 aa29.55■■■□□ 2.32
VEGFC-202ENST00000618562 USP17L12C9JPN9 530 aa29.54■■■□□ 2.32
VEGFC-202ENST00000618562 USP17L21D6R901 530 aa29.54■■■□□ 2.32
VEGFC-202ENST00000618562 LIG1P18858 919 aa29.54■■■□□ 2.32
VEGFC-202ENST00000618562 MAP3K11Q16584 847 aa29.54■■■□□ 2.32
VEGFC-202ENST00000618562 MFSD14BQ5SR56 506 aa29.54■■■□□ 2.32
VEGFC-202ENST00000618562 SGMS1Q86VZ5 419 aa29.54■■■□□ 2.32
VEGFC-202ENST00000618562 TFIP11Q9UBB9 837 aaKnown RBP29.54■■■□□ 2.32
VEGFC-202ENST00000618562 APOA5Q6Q788 366 aa29.54■■■□□ 2.32
VEGFC-202ENST00000618562 CFAP45Q9UL16 551 aa29.54■■■□□ 2.32
VEGFC-202ENST00000618562 MROH7-TTC4A0A0A0MT08 1334 aa29.53■■■□□ 2.32
VEGFC-202ENST00000618562 IFIT3O14879 490 aaKnown RBP29.53■■■□□ 2.32
VEGFC-202ENST00000618562 CHRNA5P30532 468 aa29.53■■■□□ 2.32
VEGFC-202ENST00000618562 LIFRP42702 1097 aa29.53■■■□□ 2.32
VEGFC-202ENST00000618562 ZC3H12CQ9C0D7 883 aaKnown RBP29.53■■■□□ 2.32
VEGFC-202ENST00000618562 PPFIA3O75145 1194 aa29.52■■■□□ 2.32
VEGFC-202ENST00000618562 TBC1D22AQ8WUA7 517 aa29.52■■■□□ 2.32
VEGFC-202ENST00000618562 TMX4Q9H1E5 349 aaPredicted RBP29.52■■■□□ 2.32
VEGFC-202ENST00000618562 ADCY5O95622 1261 aa29.52■■■□□ 2.32
VEGFC-202ENST00000618562 PPP4CP60510 307 aa29.52■■■□□ 2.32
VEGFC-202ENST00000618562 EVX2Q03828 476 aa29.52■■■□□ 2.32
VEGFC-202ENST00000618562 SH3RF3Q8TEJ3 882 aaPredicted RBP29.52■■■□□ 2.32
VEGFC-202ENST00000618562 RTFDC1Q9BY42 306 aaPredicted RBP29.52■■■□□ 2.32
VEGFC-202ENST00000618562 DHX16O60231 1041 aaKnown RBP29.51■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms