RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 ZNF532Q9HCE3 1301 aa23.48■■□□□ 1.35
NEK3-208ENST00000618534 FOXN1O15353 648 aa23.47■■□□□ 1.35
NEK3-208ENST00000618534 BMP6P22004 513 aa23.47■■□□□ 1.35
NEK3-208ENST00000618534 NKX1-1Q15270 411 aaPredicted RBP23.47■■□□□ 1.35
NEK3-208ENST00000618534 CCDC102BQ68D86 513 aa23.47■■□□□ 1.35
NEK3-208ENST00000618534 LY9Q9HBG7 655 aa23.47■■□□□ 1.35
NEK3-208ENST00000618534 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.47■■□□□ 1.35
NEK3-208ENST00000618534 TMEM87BQ96K49 555 aa23.47■■□□□ 1.35
NEK3-208ENST00000618534 GREM2Q9H772 168 aa23.47■■□□□ 1.35
NEK3-208ENST00000618534 ITGA6P23229 1130 aa23.46■■□□□ 1.35
NEK3-208ENST00000618534 SPECC1Q5M775 1068 aa23.46■■□□□ 1.35
NEK3-208ENST00000618534 KIF6Q6ZMV9 814 aa23.46■■□□□ 1.35
NEK3-208ENST00000618534 TTF1Q15361 905 aaPredicted RBP23.45■■□□□ 1.35
NEK3-208ENST00000618534 UBE3CQ15386 1083 aa23.45■■□□□ 1.35
NEK3-208ENST00000618534 HSP90AA4PQ58FG1 418 aa23.45■■□□□ 1.35
NEK3-208ENST00000618534 TMEM67Q5HYA8 995 aa23.45■■□□□ 1.35
NEK3-208ENST00000618534 TMEM139Q8IV31 216 aa23.45■■□□□ 1.35
NEK3-208ENST00000618534 WWC3Q9ULE0 1092 aa23.45■■□□□ 1.35
NEK3-208ENST00000618534 FHOD1Q9Y613 1164 aa23.45■■□□□ 1.35
NEK3-208ENST00000618534 PDE6AP16499 860 aa23.45■■□□□ 1.34
NEK3-208ENST00000618534 BMS1Q14692 1282 aaKnown RBP23.45■■□□□ 1.34
NEK3-208ENST00000618534 SLC26A6Q9BXS9 759 aa23.45■■□□□ 1.34
NEK3-208ENST00000618534 URI1O94763 535 aaPredicted RBP23.44■■□□□ 1.34
NEK3-208ENST00000618534 CNNM1Q9NRU3 951 aa23.44■■□□□ 1.34
NEK3-208ENST00000618534 GPTP24298 496 aa23.44■■□□□ 1.34
NEK3-208ENST00000618534 SGMS1Q86VZ5 419 aa23.44■■□□□ 1.34
NEK3-208ENST00000618534 TTLL11Q8NHH1 800 aa23.44■■□□□ 1.34
NEK3-208ENST00000618534 ZNF512BQ96KM6 892 aaPredicted RBP23.44■■□□□ 1.34
NEK3-208ENST00000618534 MYO1BO43795 1136 aa23.43■■□□□ 1.34
NEK3-208ENST00000618534 STK11IPQ8N1F8 1099 aa23.43■■□□□ 1.34
NEK3-208ENST00000618534 VGLL2Q8N8G2 317 aa23.43■■□□□ 1.34
NEK3-208ENST00000618534 KRI1Q8N9T8 703 aaKnown RBP23.43■■□□□ 1.34
NEK3-208ENST00000618534 UBXN4Q92575 508 aa23.43■■□□□ 1.34
NEK3-208ENST00000618534 PRDM11Q9NQV5 511 aa23.43■■□□□ 1.34
NEK3-208ENST00000618534 PHKA1P46020 1223 aa23.43■■□□□ 1.34
NEK3-208ENST00000618534 MDM2Q00987 491 aaPredicted RBP23.43■■□□□ 1.34
NEK3-208ENST00000618534 FCHSD1Q86WN1 690 aa23.43■■□□□ 1.34
NEK3-208ENST00000618534 MNS1Q8NEH6 495 aa23.43■■□□□ 1.34
NEK3-208ENST00000618534 PARP3Q9Y6F1 533 aa23.43■■□□□ 1.34
NEK3-208ENST00000618534 TCRBV5S4A2TA0A5A2 114 aa23.42■■□□□ 1.34
NEK3-208ENST00000618534 VWA3AA6NCI4 1184 aa23.42■■□□□ 1.34
NEK3-208ENST00000618534 DNAJC10Q8IXB1 793 aa23.42■■□□□ 1.34
NEK3-208ENST00000618534 STRBPQ96SI9 672 aaKnown RBP23.42■■□□□ 1.34
NEK3-208ENST00000618534 PPP2R2CQ9Y2T4 447 aa23.42■■□□□ 1.34
NEK3-208ENST00000618534 ARHGAP6O43182 974 aa23.42■■□□□ 1.34
NEK3-208ENST00000618534 ZSCAN12O43309 604 aa23.42■■□□□ 1.34
NEK3-208ENST00000618534 TADA3O75528 432 aa23.42■■□□□ 1.34
NEK3-208ENST00000618534 GRIN1Q05586 938 aa23.42■■□□□ 1.34
NEK3-208ENST00000618534 SSRP1Q08945 709 aaKnown RBP23.42■■□□□ 1.34
NEK3-208ENST00000618534 NOSTRINQ8IVI9 506 aa23.42■■□□□ 1.34
NEK3-208ENST00000618534 FAM177A1Q8N128 213 aaPredicted RBP23.42■■□□□ 1.34
NEK3-208ENST00000618534 CARD6Q9BX69 1037 aa23.42■■□□□ 1.34
NEK3-208ENST00000618534 SHANK3Q9BYB0 1731 aa23.42■■□□□ 1.34
NEK3-208ENST00000618534 MAN1B1Q9UKM7 699 aa23.42■■□□□ 1.34
NEK3-208ENST00000618534 STK36Q9NRP7 1315 aa23.41■■□□□ 1.34
NEK3-208ENST00000618534 DCCP43146 1447 aa23.41■■□□□ 1.34
NEK3-208ENST00000618534 PNMA6AP0CW24 399 aaPredicted RBP23.41■■□□□ 1.34
NEK3-208ENST00000618534 GUCY1A2P33402 732 aa23.41■■□□□ 1.34
NEK3-208ENST00000618534 CTDSPL2Q05D32 466 aa23.41■■□□□ 1.34
NEK3-208ENST00000618534 AIDAQ96BJ3 306 aa23.41■■□□□ 1.34
NEK3-208ENST00000618534 TBC1D2BQ9UPU7 963 aa23.41■■□□□ 1.34
NEK3-208ENST00000618534 SLC12A7Q9Y666 1083 aa23.41■■□□□ 1.34
NEK3-208ENST00000618534 CDHR2Q9BYE9 1310 aa23.41■■□□□ 1.34
NEK3-208ENST00000618534 ANKRD18BA2A2Z9 1011 aa23.41■■□□□ 1.34
NEK3-208ENST00000618534 BTBD18B2RXH4 712 aa23.41■■□□□ 1.34
NEK3-208ENST00000618534 IL2RBP14784 551 aa23.41■■□□□ 1.34
NEK3-208ENST00000618534 CTSWP56202 376 aa23.41■■□□□ 1.34
NEK3-208ENST00000618534 TBX2Q13207 712 aaPredicted RBP23.41■■□□□ 1.34
NEK3-208ENST00000618534 HLFQ16534 295 aa23.41■■□□□ 1.34
NEK3-208ENST00000618534 SRRTQ9BXP5 876 aaKnown RBP23.41■■□□□ 1.34
NEK3-208ENST00000618534 EPB41L4AQ9HCS5 686 aaPredicted RBP23.41■■□□□ 1.34
NEK3-208ENST00000618534 ZSWIM5Q9P217 1185 aa23.41■■□□□ 1.34
NEK3-208ENST00000618534 TACC3Q9Y6A5 838 aa23.41■■□□□ 1.34
NEK3-208ENST00000618534 IFIT3O14879 490 aaKnown RBP23.4■■□□□ 1.34
NEK3-208ENST00000618534 FMNL1O95466 1100 aaPredicted RBP23.4■■□□□ 1.34
NEK3-208ENST00000618534 PRR29P0C7W0 189 aa23.4■■□□□ 1.34
NEK3-208ENST00000618534 TOB1P50616 345 aaPredicted RBP23.4■■□□□ 1.34
NEK3-208ENST00000618534 FMR1Q06787 632 aaKnown RBP eCLIP23.4■■□□□ 1.34
NEK3-208ENST00000618534 POSTNQ15063 836 aa23.4■■□□□ 1.34
NEK3-208ENST00000618534 NLRP10Q86W26 655 aa23.4■■□□□ 1.34
NEK3-208ENST00000618534 KCNJ14Q9UNX9 436 aa23.4■■□□□ 1.34
NEK3-208ENST00000618534 TOGARAM1Q9Y4F4 1720 aa23.39■■□□□ 1.34
NEK3-208ENST00000618534 LRP6O75581 1613 aa23.39■■□□□ 1.34
NEK3-208ENST00000618534 PDE8BO95263 885 aa23.39■■□□□ 1.34
NEK3-208ENST00000618534 LIFRP42702 1097 aa23.39■■□□□ 1.34
NEK3-208ENST00000618534 ZNF827Q17R98 1081 aa23.39■■□□□ 1.34
NEK3-208ENST00000618534 GIGYF2Q6Y7W6 1299 aaKnown RBP23.39■■□□□ 1.34
NEK3-208ENST00000618534 PDILTQ8N807 584 aa23.39■■□□□ 1.34
NEK3-208ENST00000618534 BAG1Q99933 345 aaPredicted RBP23.39■■□□□ 1.34
NEK3-208ENST00000618534 TMOD3Q9NYL9 352 aa23.39■■□□□ 1.34
NEK3-208ENST00000618534 NFE2L3Q9Y4A8 694 aa23.39■■□□□ 1.34
NEK3-208ENST00000618534 MAP3K15Q6ZN16 1313 aa23.39■■□□□ 1.33
NEK3-208ENST00000618534 COL5A2P05997 1499 aaPredicted RBP23.39■■□□□ 1.33
NEK3-208ENST00000618534 ZRANB2O95218 330 aaKnown RBP eCLIP23.39■■□□□ 1.33
NEK3-208ENST00000618534 MMP1P03956 469 aa23.39■■□□□ 1.33
NEK3-208ENST00000618534 ARID4AP29374 1257 aaPredicted RBP23.39■■□□□ 1.33
NEK3-208ENST00000618534 DIS3L2Q8IYB7 885 aaKnown RBP23.39■■□□□ 1.33
NEK3-208ENST00000618534 TRMT44Q8IYL2 757 aaKnown RBP23.39■■□□□ 1.33
NEK3-208ENST00000618534 FBXO2Q9UK22 296 aaPredicted RBP23.39■■□□□ 1.33
NEK3-208ENST00000618534 ARGLU1Q9NWB6 273 aaPredicted RBP23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 145.3 ms