RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 GSTO1P78417 241 aa19.54■□□□□ 0.72
BRCA1-228ENST00000618469 TCP10Q12799 353 aa19.54■□□□□ 0.72
BRCA1-228ENST00000618469 CRHR2Q13324 411 aa19.54■□□□□ 0.72
BRCA1-228ENST00000618469 AK9Q5TCS8 1911 aa19.54■□□□□ 0.72
BRCA1-228ENST00000618469 BRCA2P51587 3418 aa19.53■□□□□ 0.72
BRCA1-228ENST00000618469 LAMB1P07942 1786 aa19.53■□□□□ 0.72
BRCA1-228ENST00000618469 CYP2E1P05181 493 aaPredicted RBP19.53■□□□□ 0.72
BRCA1-228ENST00000618469 IFIT2P09913 472 aaKnown RBP19.53■□□□□ 0.72
BRCA1-228ENST00000618469 CRBNQ96SW2 442 aa19.53■□□□□ 0.72
BRCA1-228ENST00000618469 RBBP6Q7Z6E9 1792 aaKnown RBP19.52■□□□□ 0.72
BRCA1-228ENST00000618469 USP2O75604 605 aaPredicted RBP19.52■□□□□ 0.72
BRCA1-228ENST00000618469 FAM151AQ8WW52 585 aa19.52■□□□□ 0.72
BRCA1-228ENST00000618469 FAM163AQ96GL9 167 aaPredicted RBP19.52■□□□□ 0.72
BRCA1-228ENST00000618469 PIH1D3Q9NQM4 214 aaKnown RBP19.52■□□□□ 0.72
BRCA1-228ENST00000618469 FAM198AQ9UFP1 575 aa19.52■□□□□ 0.72
BRCA1-228ENST00000618469 NDUFB9Q9Y6M9 179 aa19.52■□□□□ 0.72
BRCA1-228ENST00000618469 GPR75-ASB3A0A0A6YYF3 556 aa19.51■□□□□ 0.71
BRCA1-228ENST00000618469 LDHCP07864 332 aa19.51■□□□□ 0.71
BRCA1-228ENST00000618469 RGS3P49796 1198 aa19.51■□□□□ 0.71
BRCA1-228ENST00000618469 NAA16Q6N069 864 aaPredicted RBP19.51■□□□□ 0.71
BRCA1-228ENST00000618469 ANKRD13AQ8IZ07 590 aa19.51■□□□□ 0.71
BRCA1-228ENST00000618469 HOOK2Q96ED9 719 aa19.51■□□□□ 0.71
BRCA1-228ENST00000618469 ERO1AQ96HE7 468 aa19.51■□□□□ 0.71
BRCA1-228ENST00000618469 EFCC1Q9HA90 598 aa19.51■□□□□ 0.71
BRCA1-228ENST00000618469 COLQQ9Y215 455 aaPredicted RBP19.51■□□□□ 0.71
BRCA1-228ENST00000618469 INHBEP58166 350 aa19.5■□□□□ 0.71
BRCA1-228ENST00000618469 PICALMQ13492 652 aa19.5■□□□□ 0.71
BRCA1-228ENST00000618469 PTPN18Q99952 460 aa19.5■□□□□ 0.71
BRCA1-228ENST00000618469 IDI2Q9BXS1 227 aa19.5■□□□□ 0.71
BRCA1-228ENST00000618469 LRRCC1Q9C099 1032 aa19.5■□□□□ 0.71
BRCA1-228ENST00000618469 UNCXA6NJT0 531 aa19.49■□□□□ 0.71
BRCA1-228ENST00000618469 SMARCA5O60264 1052 aaPredicted RBP19.49■□□□□ 0.71
BRCA1-228ENST00000618469 WDHD1O75717 1129 aaPredicted RBP19.49■□□□□ 0.71
BRCA1-228ENST00000618469 IDH1O75874 414 aaKnown RBP19.49■□□□□ 0.71
BRCA1-228ENST00000618469 ZBTB48P10074 688 aaPredicted RBP19.49■□□□□ 0.71
BRCA1-228ENST00000618469 RHBDL3P58872 404 aa19.49■□□□□ 0.71
BRCA1-228ENST00000618469 DCAF15Q66K64 600 aa19.49■□□□□ 0.71
BRCA1-228ENST00000618469 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.49■□□□□ 0.71
BRCA1-228ENST00000618469 NOL10Q9BSC4 688 aaKnown RBP19.49■□□□□ 0.71
BRCA1-228ENST00000618469 ELP3Q9H9T3 547 aa19.49■□□□□ 0.71
BRCA1-228ENST00000618469 PCDHB15Q9Y5E8 787 aa19.49■□□□□ 0.71
BRCA1-228ENST00000618469 CDK5RAP2Q96SN8 1893 aa19.49■□□□□ 0.71
BRCA1-228ENST00000618469 FOCADQ5VW36 1801 aa19.48■□□□□ 0.71
BRCA1-228ENST00000618469 ENTPD3O75355 529 aa19.48■□□□□ 0.71
BRCA1-228ENST00000618469 ECM2O94769 699 aaPredicted RBP19.48■□□□□ 0.71
BRCA1-228ENST00000618469 SP3Q02447 781 aa19.48■□□□□ 0.71
BRCA1-228ENST00000618469 VGLL4Q14135 290 aa19.48■□□□□ 0.71
BRCA1-228ENST00000618469 ZFPM1Q8IX07 1006 aa19.48■□□□□ 0.71
BRCA1-228ENST00000618469 ARMC5Q96C12 935 aa19.48■□□□□ 0.71
BRCA1-228ENST00000618469 WRNIP1Q96S55 665 aa19.48■□□□□ 0.71
BRCA1-228ENST00000618469 ANTXR1Q9H6X2 564 aa19.48■□□□□ 0.71
BRCA1-228ENST00000618469 DDX4Q9NQI0 724 aaKnown RBP19.48■□□□□ 0.71
BRCA1-228ENST00000618469 CSADQ9Y600 493 aa19.48■□□□□ 0.71
BRCA1-228ENST00000618469 ZSWIM8A7E2V4 1837 aa19.48■□□□□ 0.71
BRCA1-228ENST00000618469 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.47■□□□□ 0.71
BRCA1-228ENST00000618469 MIGA2Q7L4E1 593 aa19.47■□□□□ 0.71
BRCA1-228ENST00000618469 ADGRA1Q86SQ6 560 aa19.47■□□□□ 0.71
BRCA1-228ENST00000618469 ZSCAN29Q8IWY8 852 aaPredicted RBP19.47■□□□□ 0.71
BRCA1-228ENST00000618469 CNKSR2Q8WXI2 1034 aa19.47■□□□□ 0.71
BRCA1-228ENST00000618469 DNAJC2Q99543 621 aaKnown RBP19.47■□□□□ 0.71
BRCA1-228ENST00000618469 TMEM106CQ9BVX2 250 aa19.47■□□□□ 0.71
BRCA1-228ENST00000618469 ZNF341Q9BYN7 854 aa19.47■□□□□ 0.71
BRCA1-228ENST00000618469 AATFQ9NY61 560 aaKnown RBP eCLIP19.47■□□□□ 0.71
BRCA1-228ENST00000618469 MAP3K9P80192 1104 aa19.46■□□□□ 0.71
BRCA1-228ENST00000618469 TEX11Q8IYF3 940 aa19.46■□□□□ 0.71
BRCA1-228ENST00000618469 DCTPP1Q9H773 170 aa19.46■□□□□ 0.71
BRCA1-228ENST00000618469 PTCH2Q9Y6C5 1203 aa19.46■□□□□ 0.71
BRCA1-228ENST00000618469 ATRNL1Q5VV63 1379 aa19.45■□□□□ 0.7
BRCA1-228ENST00000618469 IGSF3O75054 1194 aa19.45■□□□□ 0.7
BRCA1-228ENST00000618469 OTUD7BQ6GQQ9 843 aa19.45■□□□□ 0.7
BRCA1-228ENST00000618469 SH3RF3Q8TEJ3 882 aaPredicted RBP19.45■□□□□ 0.7
BRCA1-228ENST00000618469 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.45■□□□□ 0.7
BRCA1-228ENST00000618469 OPTNQ96CV9 577 aa19.45■□□□□ 0.7
BRCA1-228ENST00000618469 COL2A1P02458 1487 aaPredicted RBP19.44■□□□□ 0.7
BRCA1-228ENST00000618469 BAG3O95817 575 aa19.44■□□□□ 0.7
BRCA1-228ENST00000618469 MAP4K4O95819 1239 aaPredicted RBP19.44■□□□□ 0.7
BRCA1-228ENST00000618469 CYP7A1P22680 504 aa19.44■□□□□ 0.7
BRCA1-228ENST00000618469 MAP3K12Q12852 859 aa19.44■□□□□ 0.7
BRCA1-228ENST00000618469 SLC4A8Q2Y0W8 1093 aa19.44■□□□□ 0.7
BRCA1-228ENST00000618469 SH3BP5LQ7L8J4 393 aa19.44■□□□□ 0.7
BRCA1-228ENST00000618469 MAGEB6Q8N7X4 407 aa19.44■□□□□ 0.7
BRCA1-228ENST00000618469 ZNF333Q96JL9 665 aa19.44■□□□□ 0.7
BRCA1-228ENST00000618469 SNCAIPQ9Y6H5 919 aa19.44■□□□□ 0.7
BRCA1-228ENST00000618469 DDTLA6NHG4 134 aaPredicted RBP19.43■□□□□ 0.7
BRCA1-228ENST00000618469 H0YGN5 161 aa19.43■□□□□ 0.7
BRCA1-228ENST00000618469 GOLIM4O00461 696 aa19.43■□□□□ 0.7
BRCA1-228ENST00000618469 PLCG2P16885 1265 aa19.43■□□□□ 0.7
BRCA1-228ENST00000618469 TTF1Q15361 905 aaPredicted RBP19.43■□□□□ 0.7
BRCA1-228ENST00000618469 SLC9C1Q4G0N8 1177 aa19.43■□□□□ 0.7
BRCA1-228ENST00000618469 ZKSCAN4Q969J2 545 aaPredicted RBP19.43■□□□□ 0.7
BRCA1-228ENST00000618469 OTUD5Q96G74 571 aa19.43■□□□□ 0.7
BRCA1-228ENST00000618469 DOCK1Q14185 1865 aa19.43■□□□□ 0.7
BRCA1-228ENST00000618469 MYH7P12883 1935 aa19.43■□□□□ 0.7
BRCA1-228ENST00000618469 SIPA1L1O43166 1804 aa19.42■□□□□ 0.7
BRCA1-228ENST00000618469 INPP5BP32019 993 aa19.42■□□□□ 0.7
BRCA1-228ENST00000618469 MIGA1Q8NAN2 632 aa19.42■□□□□ 0.7
BRCA1-228ENST00000618469 SH3TC2Q8TF17 1288 aa19.42■□□□□ 0.7
BRCA1-228ENST00000618469 EDC3Q96F86 508 aaKnown RBP19.42■□□□□ 0.7
BRCA1-228ENST00000618469 OSBPL5Q9H0X9 879 aaPredicted RBP19.42■□□□□ 0.7
BRCA1-228ENST00000618469 BOLA2Q9H3K6 86 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms