RNA–Protein interactions for RNA: ENST00000618061.4

CBWD1-226, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 2,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-226ENST00000618061 SLC26A6Q9BXS9 759 aa16.21■□□□□ 0.19
CBWD1-226ENST00000618061 NYXQ9GZU5 481 aa16.21■□□□□ 0.19
CBWD1-226ENST00000618061 CBX8Q9HC52 389 aa16.21■□□□□ 0.19
CBWD1-226ENST00000618061 NHSQ6T4R5 1651 aa16.21■□□□□ 0.18
CBWD1-226ENST00000618061 PRDM1O75626 825 aa16.2■□□□□ 0.18
CBWD1-226ENST00000618061 GUCY1A2P33402 732 aa16.2■□□□□ 0.18
CBWD1-226ENST00000618061 STK38Q15208 465 aa16.2■□□□□ 0.18
CBWD1-226ENST00000618061 SASS6Q6UVJ0 657 aa16.2■□□□□ 0.18
CBWD1-226ENST00000618061 FAM196AQ6ZSG2 479 aa16.2■□□□□ 0.18
CBWD1-226ENST00000618061 SGMS1Q86VZ5 419 aa16.2■□□□□ 0.18
CBWD1-226ENST00000618061 SPC24Q8NBT2 197 aa16.2■□□□□ 0.18
CBWD1-226ENST00000618061 LINC00301Q8NCQ3 95 aa16.2■□□□□ 0.18
CBWD1-226ENST00000618061 FAM200AQ8TCP9 573 aa16.2■□□□□ 0.18
CBWD1-226ENST00000618061 KRT23Q9C075 422 aa16.2■□□□□ 0.18
CBWD1-226ENST00000618061 RTEL1Q9NZ71 1219 aa16.2■□□□□ 0.18
CBWD1-226ENST00000618061 THSD7AQ9UPZ6 1657 aa16.2■□□□□ 0.18
CBWD1-226ENST00000618061 TM4SF1P30408 202 aa16.2■□□□□ 0.18
CBWD1-226ENST00000618061 IARSP41252 1262 aaKnown RBP16.2■□□□□ 0.18
CBWD1-226ENST00000618061 SF3A1Q15459 793 aaKnown RBP16.2■□□□□ 0.18
CBWD1-226ENST00000618061 SLC4A8Q2Y0W8 1093 aa16.2■□□□□ 0.18
CBWD1-226ENST00000618061 KRT40Q6A162 431 aa16.2■□□□□ 0.18
CBWD1-226ENST00000618061 GJD4Q96KN9 370 aaPredicted RBP16.2■□□□□ 0.18
CBWD1-226ENST00000618061 TTC12Q9H892 705 aaPredicted RBP16.2■□□□□ 0.18
CBWD1-226ENST00000618061 CNNM2Q9H8M5 875 aa16.2■□□□□ 0.18
CBWD1-226ENST00000618061 TIAM2Q8IVF5 1701 aa16.2■□□□□ 0.18
CBWD1-226ENST00000618061 TAF1LQ8IZX4 1826 aa16.19■□□□□ 0.18
CBWD1-226ENST00000618061 TNRC6CQ9HCJ0 1690 aaKnown RBP16.19■□□□□ 0.18
CBWD1-226ENST00000618061 RFC4P35249 363 aa16.19■□□□□ 0.18
CBWD1-226ENST00000618061 WTAPQ15007 396 aa16.19■□□□□ 0.18
CBWD1-226ENST00000618061 CCDC73Q6ZRK6 1079 aa16.19■□□□□ 0.18
CBWD1-226ENST00000618061 NUP133Q8WUM0 1156 aa16.19■□□□□ 0.18
CBWD1-226ENST00000618061 LRRC4BQ9NT99 713 aa16.19■□□□□ 0.18
CBWD1-226ENST00000618061 MYH13Q9UKX3 1938 aa16.19■□□□□ 0.18
CBWD1-226ENST00000618061 MARCKSP29966 332 aaPredicted RBP16.19■□□□□ 0.18
CBWD1-226ENST00000618061 PRDX5P30044 214 aa16.19■□□□□ 0.18
CBWD1-226ENST00000618061 LIFRP42702 1097 aa16.19■□□□□ 0.18
CBWD1-226ENST00000618061 NDUFA8P51970 172 aa16.19■□□□□ 0.18
CBWD1-226ENST00000618061 FBXO33Q7Z6M2 555 aa16.19■□□□□ 0.18
CBWD1-226ENST00000618061 ENGASEQ8NFI3 743 aa16.19■□□□□ 0.18
CBWD1-226ENST00000618061 GPR101Q96P66 508 aaPredicted RBP16.19■□□□□ 0.18
CBWD1-226ENST00000618061 COL24A1Q17RW2 1714 aa16.18■□□□□ 0.18
CBWD1-226ENST00000618061 MECOMQ03112 1051 aa16.18■□□□□ 0.18
CBWD1-226ENST00000618061 ATL3Q6DD88 541 aa16.18■□□□□ 0.18
CBWD1-226ENST00000618061 SYNE3Q6ZMZ3 975 aa16.18■□□□□ 0.18
CBWD1-226ENST00000618061 AATFQ9NY61 560 aaKnown RBP eCLIP16.18■□□□□ 0.18
CBWD1-226ENST00000618061 MYH2Q9UKX2 1941 aa16.18■□□□□ 0.18
CBWD1-226ENST00000618061 CDKL5O76039 1030 aa16.17■□□□□ 0.18
CBWD1-226ENST00000618061 HIBADHP31937 336 aaKnown RBP16.17■□□□□ 0.18
CBWD1-226ENST00000618061 FAM160A1Q05DH4 1040 aa16.17■□□□□ 0.18
CBWD1-226ENST00000618061 TRAPPC3LQ5T215 181 aa16.17■□□□□ 0.18
CBWD1-226ENST00000618061 CPLX2Q6PUV4 134 aaKnown RBP16.17■□□□□ 0.18
CBWD1-226ENST00000618061 C11orf57Q6ZUT1 292 aaPredicted RBP16.17■□□□□ 0.18
CBWD1-226ENST00000618061 SPTLC2O15270 562 aa16.17■□□□□ 0.18
CBWD1-226ENST00000618061 KINO60870 393 aaKnown RBP16.17■□□□□ 0.18
CBWD1-226ENST00000618061 GNL2Q13823 731 aaKnown RBP16.17■□□□□ 0.18
CBWD1-226ENST00000618061 NFIXQ14938 502 aa16.17■□□□□ 0.18
CBWD1-226ENST00000618061 ANO1Q5XXA6 986 aa16.17■□□□□ 0.18
CBWD1-226ENST00000618061 BRAPQ7Z569 592 aa16.17■□□□□ 0.18
CBWD1-226ENST00000618061 C17orf53Q8N3J3 647 aaPredicted RBP16.17■□□□□ 0.18
CBWD1-226ENST00000618061 NSUN4Q96CB9 384 aaKnown RBP16.17■□□□□ 0.18
CBWD1-226ENST00000618061 AFF2P51816 1311 aa16.17■□□□□ 0.18
CBWD1-226ENST00000618061 SBF2Q86WG5 1849 aa16.16■□□□□ 0.18
CBWD1-226ENST00000618061 ERICH2A1L162 156 aa16.16■□□□□ 0.18
CBWD1-226ENST00000618061 ZNF165P49910 485 aa16.16■□□□□ 0.18
CBWD1-226ENST00000618061 SSRP1Q08945 709 aaKnown RBP16.16■□□□□ 0.18
CBWD1-226ENST00000618061 ADALQ6DHV7 355 aa16.16■□□□□ 0.18
CBWD1-226ENST00000618061 MRPS27Q92552 414 aaKnown RBP16.16■□□□□ 0.18
CBWD1-226ENST00000618061 POLR3EQ9NVU0 708 aa16.16■□□□□ 0.18
CBWD1-226ENST00000618061 KCNJ14Q9UNX9 436 aa16.16■□□□□ 0.18
CBWD1-226ENST00000618061 LY75O60449 1722 aa16.16■□□□□ 0.18
CBWD1-226ENST00000618061 WDHD1O75717 1129 aaPredicted RBP16.16■□□□□ 0.18
CBWD1-226ENST00000618061 RTN1Q16799 776 aa16.16■□□□□ 0.18
CBWD1-226ENST00000618061 SEPT12Q8IYM1 358 aa16.16■□□□□ 0.18
CBWD1-226ENST00000618061 FMR1NBQ8N0W7 255 aaPredicted RBP16.16■□□□□ 0.18
CBWD1-226ENST00000618061 UBAC1Q9BSL1 405 aa16.16■□□□□ 0.18
CBWD1-226ENST00000618061 TNKSO95271 1327 aa16.16■□□□□ 0.18
CBWD1-226ENST00000618061 hCG_1642624A0A1W2PR95 340 aa16.15■□□□□ 0.18
CBWD1-226ENST00000618061 SART3Q15020 963 aaKnown RBP16.15■□□□□ 0.18
CBWD1-226ENST00000618061 ANKIB1Q9P2G1 1089 aa16.15■□□□□ 0.18
CBWD1-226ENST00000618061 SPATA31A6Q5VVP1 1343 aa16.15■□□□□ 0.18
CBWD1-226ENST00000618061 USP17L12C9JPN9 530 aa16.14■□□□□ 0.17
CBWD1-226ENST00000618061 USP17L21D6R901 530 aa16.14■□□□□ 0.17
CBWD1-226ENST00000618061 ZNF500O60304 480 aaPredicted RBP16.14■□□□□ 0.17
CBWD1-226ENST00000618061 FMNL1O95466 1100 aaPredicted RBP16.14■□□□□ 0.17
CBWD1-226ENST00000618061 CYP2D6P10635 497 aa16.14■□□□□ 0.17
CBWD1-226ENST00000618061 CTR9Q6PD62 1173 aa16.14■□□□□ 0.17
CBWD1-226ENST00000618061 ZNF654Q8IZM8 581 aa16.14■□□□□ 0.17
CBWD1-226ENST00000618061 RNF41Q9H4P4 317 aaPredicted RBP16.14■□□□□ 0.17
CBWD1-226ENST00000618061 MROH7-TTC4A0A0A0MT08 1334 aa16.14■□□□□ 0.17
CBWD1-226ENST00000618061 YEATS4O95619 227 aa16.14■□□□□ 0.17
CBWD1-226ENST00000618061 HSPA1LP34931 641 aa16.14■□□□□ 0.17
CBWD1-226ENST00000618061 TRIM29Q14134 588 aa16.14■□□□□ 0.17
CBWD1-226ENST00000618061 KCNG4Q8TDN1 519 aa16.14■□□□□ 0.17
CBWD1-226ENST00000618061 ANKRD2Q9GZV1 360 aa16.14■□□□□ 0.17
CBWD1-226ENST00000618061 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.13■□□□□ 0.17
CBWD1-226ENST00000618061 BTBD18B2RXH4 712 aa16.13■□□□□ 0.17
CBWD1-226ENST00000618061 NMT2O60551 498 aa16.13■□□□□ 0.17
CBWD1-226ENST00000618061 SEC23AQ15436 765 aa16.13■□□□□ 0.17
CBWD1-226ENST00000618061 NBPF11Q86T75 865 aa16.13■□□□□ 0.17
CBWD1-226ENST00000618061 ENAHQ8N8S7 591 aaPredicted RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms