RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 VGLL4Q14135 290 aa30.31■■■□□ 2.44
PMS1-220ENST00000618056 BCL11AQ9H165 835 aa30.31■■■□□ 2.44
PMS1-220ENST00000618056 CSADQ9Y600 493 aa30.31■■■□□ 2.44
PMS1-220ENST00000618056 COL2A1P02458 1487 aaPredicted RBP30.3■■■□□ 2.44
PMS1-220ENST00000618056 PLCG2P16885 1265 aa30.3■■■□□ 2.44
PMS1-220ENST00000618056 SREBF2Q12772 1141 aa30.3■■■□□ 2.44
PMS1-220ENST00000618056 MAP3K12Q12852 859 aa30.3■■■□□ 2.44
PMS1-220ENST00000618056 MIGA2Q7L4E1 593 aa30.3■■■□□ 2.44
PMS1-220ENST00000618056 WRNIP1Q96S55 665 aa30.3■■■□□ 2.44
PMS1-220ENST00000618056 RNF186Q9NXI6 227 aa30.3■■■□□ 2.44
PMS1-220ENST00000618056 AATFQ9NY61 560 aaKnown RBP eCLIP30.3■■■□□ 2.44
PMS1-220ENST00000618056 CASP8AP2Q9UKL3 1982 aa30.3■■■□□ 2.44
PMS1-220ENST00000618056 MYH7P12883 1935 aa30.29■■■□□ 2.44
PMS1-220ENST00000618056 PICALMQ13492 652 aa30.29■■■□□ 2.44
PMS1-220ENST00000618056 SH3BP5LQ7L8J4 393 aa30.29■■■□□ 2.44
PMS1-220ENST00000618056 ELP3Q9H9T3 547 aa30.29■■■□□ 2.44
PMS1-220ENST00000618056 CYP7A1P22680 504 aa30.28■■■□□ 2.44
PMS1-220ENST00000618056 TEX11Q8IYF3 940 aa30.28■■■□□ 2.44
PMS1-220ENST00000618056 ZNF112Q9UJU3 913 aa30.28■■■□□ 2.44
PMS1-220ENST00000618056 DDTLA6NHG4 134 aaPredicted RBP30.27■■■□□ 2.44
PMS1-220ENST00000618056 MANSC4A6NHS7 340 aaPredicted RBP30.27■■■□□ 2.44
PMS1-220ENST00000618056 GJA5P36382 358 aa30.27■■■□□ 2.44
PMS1-220ENST00000618056 SH3RF3Q8TEJ3 882 aaPredicted RBP30.27■■■□□ 2.44
PMS1-220ENST00000618056 TSKSQ9UJT2 592 aa30.27■■■□□ 2.44
PMS1-220ENST00000618056 INHBEP58166 350 aa30.26■■■□□ 2.44
PMS1-220ENST00000618056 MAP3K10Q02779 954 aa30.26■■■□□ 2.44
PMS1-220ENST00000618056 CERS3Q8IU89 383 aa30.26■■■□□ 2.44
PMS1-220ENST00000618056 ZSCAN29Q8IWY8 852 aaPredicted RBP30.26■■■□□ 2.44
PMS1-220ENST00000618056 MAGEB6Q8N7X4 407 aa30.26■■■□□ 2.44
PMS1-220ENST00000618056 OPTNQ96CV9 577 aa30.26■■■□□ 2.44
PMS1-220ENST00000618056 DNAJC2Q99543 621 aaKnown RBP30.26■■■□□ 2.44
PMS1-220ENST00000618056 ZBTB4Q9P1Z0 1013 aaPredicted RBP30.26■■■□□ 2.44
PMS1-220ENST00000618056 SNCAIPQ9Y6H5 919 aa30.26■■■□□ 2.44
PMS1-220ENST00000618056 TRPA1O75762 1119 aa30.25■■■□□ 2.43
PMS1-220ENST00000618056 HAUS7Q99871 368 aa30.25■■■□□ 2.43
PMS1-220ENST00000618056 GOLIM4O00461 696 aa30.25■■■□□ 2.43
PMS1-220ENST00000618056 HDAC1Q13547 482 aaPredicted RBP30.25■■■□□ 2.43
PMS1-220ENST00000618056 ZKSCAN4Q969J2 545 aaPredicted RBP30.25■■■□□ 2.43
PMS1-220ENST00000618056 OSBPL5Q9H0X9 879 aaPredicted RBP30.25■■■□□ 2.43
PMS1-220ENST00000618056 BOLA2Q9H3K6 86 aa30.25■■■□□ 2.43
PMS1-220ENST00000618056 SPDYE5A6NIY4 337 aa30.24■■■□□ 2.43
PMS1-220ENST00000618056 CENPBP07199 599 aaPredicted RBP30.24■■■□□ 2.43
PMS1-220ENST00000618056 PAG1Q9NWQ8 432 aa30.24■■■□□ 2.43
PMS1-220ENST00000618056 SUPT16HQ9Y5B9 1047 aaKnown RBP30.24■■■□□ 2.43
PMS1-220ENST00000618056 MYH1P12882 1939 aa30.23■■■□□ 2.43
PMS1-220ENST00000618056 ECHDC1Q9NTX5 307 aa30.23■■■□□ 2.43
PMS1-220ENST00000618056 INPP5BP32019 993 aa30.22■■■□□ 2.43
PMS1-220ENST00000618056 ERO1BQ86YB8 467 aa30.22■■■□□ 2.43
PMS1-220ENST00000618056 TBC1D12O60347 775 aa30.21■■■□□ 2.43
PMS1-220ENST00000618056 PDE6AP16499 860 aa30.21■■■□□ 2.43
PMS1-220ENST00000618056 NOL9Q5SY16 702 aaKnown RBP30.21■■■□□ 2.43
PMS1-220ENST00000618056 CNKSR2Q8WXI2 1034 aa30.21■■■□□ 2.43
PMS1-220ENST00000618056 SIPA1L1O43166 1804 aa30.21■■■□□ 2.43
PMS1-220ENST00000618056 PHF20L1A8MW92 1017 aa30.2■■■□□ 2.43
PMS1-220ENST00000618056 SLC9C2Q5TAH2 1124 aa30.2■■■□□ 2.43
PMS1-220ENST00000618056 TGFBRAP1Q8WUH2 860 aa30.2■■■□□ 2.43
PMS1-220ENST00000618056 EDC3Q96F86 508 aaKnown RBP30.2■■■□□ 2.43
PMS1-220ENST00000618056 GPATCH3Q96I76 525 aa30.2■■■□□ 2.43
PMS1-220ENST00000618056 DOCK1Q14185 1865 aa30.2■■■□□ 2.43
PMS1-220ENST00000618056 FLT1P17948 1338 aa30.19■■■□□ 2.42
PMS1-220ENST00000618056 TESPA1A2RU30 521 aaPredicted RBP30.19■■■□□ 2.42
PMS1-220ENST00000618056 DYNLL1P63167 89 aaKnown RBP30.19■■■□□ 2.42
PMS1-220ENST00000618056 MIGA1Q8NAN2 632 aa30.19■■■□□ 2.42
PMS1-220ENST00000618056 OTUD5Q96G74 571 aa30.19■■■□□ 2.42
PMS1-220ENST00000618056 MS4A4AQ96JQ5 239 aa30.19■■■□□ 2.42
PMS1-220ENST00000618056 CFHR5Q9BXR6 569 aa30.19■■■□□ 2.42
PMS1-220ENST00000618056 DHX36Q9H2U1 1008 aaKnown RBP30.19■■■□□ 2.42
PMS1-220ENST00000618056 ALDH1A1P00352 501 aa30.19■■■□□ 2.42
PMS1-220ENST00000618056 IFNL1Q8IU54 200 aa30.19■■■□□ 2.42
PMS1-220ENST00000618056 EXOC6Q8TAG9 804 aa30.19■■■□□ 2.42
PMS1-220ENST00000618056 GCC1Q96CN9 775 aa30.19■■■□□ 2.42
PMS1-220ENST00000618056 PPATQ06203 517 aa30.18■■■□□ 2.42
PMS1-220ENST00000618056 TCRBV5S4A2TA0A5A2 114 aa30.17■■■□□ 2.42
PMS1-220ENST00000618056 GTF2A2P52657 109 aa30.17■■■□□ 2.42
PMS1-220ENST00000618056 PPIL2Q13356 520 aa30.17■■■□□ 2.42
PMS1-220ENST00000618056 MAPKAPK5Q8IW41 473 aa30.17■■■□□ 2.42
PMS1-220ENST00000618056 RIOK1Q9BRS2 568 aaKnown RBP30.17■■■□□ 2.42
PMS1-220ENST00000618056 ZNF532Q9HCE3 1301 aa30.16■■■□□ 2.42
PMS1-220ENST00000618056 IGF2BP3O00425 579 aaKnown RBP eCLIP30.16■■■□□ 2.42
PMS1-220ENST00000618056 DDX24Q9GZR7 859 aaKnown RBP eCLIP30.16■■■□□ 2.42
PMS1-220ENST00000618056 ATAD5Q96QE3 1844 aa30.16■■■□□ 2.42
PMS1-220ENST00000618056 TTC41PQ6P2S7 1318 aa30.15■■■□□ 2.42
PMS1-220ENST00000618056 TNS4Q8IZW8 715 aa30.15■■■□□ 2.42
PMS1-220ENST00000618056 PI4KBQ9UBF8 816 aa30.15■■■□□ 2.42
PMS1-220ENST00000618056 HERC5Q9UII4 1024 aaKnown RBP30.15■■■□□ 2.42
PMS1-220ENST00000618056 PHIPQ8WWQ0 1821 aa30.15■■■□□ 2.42
PMS1-220ENST00000618056 IRF6O14896 467 aa30.14■■■□□ 2.42
PMS1-220ENST00000618056 SLURP2P0DP57 97 aa30.14■■■□□ 2.42
PMS1-220ENST00000618056 OTUD7BQ6GQQ9 843 aa30.14■■■□□ 2.42
PMS1-220ENST00000618056 SCYL3Q8IZE3 742 aa30.14■■■□□ 2.42
PMS1-220ENST00000618056 MAGEB6P1A0A0J9YX57 407 aa30.13■■■□□ 2.41
PMS1-220ENST00000618056 CTNND1O60716 968 aaKnown RBP30.13■■■□□ 2.41
PMS1-220ENST00000618056 ADD2P35612 726 aa30.13■■■□□ 2.41
PMS1-220ENST00000618056 NOM1Q5C9Z4 860 aaKnown RBP30.13■■■□□ 2.41
PMS1-220ENST00000618056 PTPN18Q99952 460 aa30.13■■■□□ 2.41
PMS1-220ENST00000618056 XPO5Q9HAV4 1204 aaKnown RBP eCLIP30.13■■■□□ 2.41
PMS1-220ENST00000618056 DDX60LQ5H9U9 1706 aaKnown RBP30.13■■■□□ 2.41
PMS1-220ENST00000618056 NAV1Q8NEY1 1877 aa30.13■■■□□ 2.41
PMS1-220ENST00000618056 PTPRFP10586 1907 aa30.13■■■□□ 2.41
PMS1-220ENST00000618056 BRI3BPQ8WY22 251 aa30.12■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms