RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 CCDC82Q8N4S0 544 aa11.5□□□□□ -0.57
CUL4A-212ENST00000617546 PFKFB2O60825 505 aa11.5□□□□□ -0.57
CUL4A-212ENST00000617546 LONRF2Q1L5Z9 754 aa11.5□□□□□ -0.57
CUL4A-212ENST00000617546 CCDC84Q86UT8 332 aaPredicted RBP11.5□□□□□ -0.57
CUL4A-212ENST00000617546 CCDC144CPQ8IYA2 1237 aa11.5□□□□□ -0.57
CUL4A-212ENST00000617546 CTNND2Q9UQB3 1225 aa11.5□□□□□ -0.57
CUL4A-212ENST00000617546 EIF4G3O43432 1585 aaKnown RBP11.5□□□□□ -0.57
CUL4A-212ENST00000617546 ATP2A2P16615 1042 aaKnown RBP11.5□□□□□ -0.57
CUL4A-212ENST00000617546 ZBTB16Q05516 673 aa11.5□□□□□ -0.57
CUL4A-212ENST00000617546 TMEM132AQ24JP5 1023 aa11.5□□□□□ -0.57
CUL4A-212ENST00000617546 HSP90AA4PQ58FG1 418 aa11.5□□□□□ -0.57
CUL4A-212ENST00000617546 RPAINQ86UA6 219 aa11.5□□□□□ -0.57
CUL4A-212ENST00000617546 FERMT1Q9BQL6 677 aa11.5□□□□□ -0.57
CUL4A-212ENST00000617546 CRNKL1Q9BZJ0 848 aaKnown RBP11.5□□□□□ -0.57
CUL4A-212ENST00000617546 VIMP08670 466 aaKnown RBP11.49□□□□□ -0.57
CUL4A-212ENST00000617546 KRT13P13646 458 aa11.49□□□□□ -0.57
CUL4A-212ENST00000617546 ME3Q16798 604 aa11.49□□□□□ -0.57
CUL4A-212ENST00000617546 ICE2Q659A1 982 aa11.49□□□□□ -0.57
CUL4A-212ENST00000617546 IFNL2Q8IZJ0 200 aa11.49□□□□□ -0.57
CUL4A-212ENST00000617546 KRT9P35527 623 aa11.49□□□□□ -0.57
CUL4A-212ENST00000617546 SEL1L2Q5TEA6 688 aa11.49□□□□□ -0.57
CUL4A-212ENST00000617546 NOC4LQ9BVI4 516 aaKnown RBP11.49□□□□□ -0.57
CUL4A-212ENST00000617546 HYOU1Q9Y4L1 999 aa11.49□□□□□ -0.57
CUL4A-212ENST00000617546 ZNF518AQ6AHZ1 1483 aa11.49□□□□□ -0.57
CUL4A-212ENST00000617546 ERBB4Q15303 1308 aa11.49□□□□□ -0.57
CUL4A-212ENST00000617546 IL13P35225 146 aa11.49□□□□□ -0.57
CUL4A-212ENST00000617546 STX17P56962 302 aa11.49□□□□□ -0.57
CUL4A-212ENST00000617546 NCBP1Q09161 790 aaKnown RBP11.49□□□□□ -0.57
CUL4A-212ENST00000617546 PHLDB2Q86SQ0 1253 aa11.49□□□□□ -0.57
CUL4A-212ENST00000617546 BCAS4Q8TDM0 211 aa11.49□□□□□ -0.57
CUL4A-212ENST00000617546 C6orf50Q9HD87 102 aa11.49□□□□□ -0.57
CUL4A-212ENST00000617546 DMRT2Q9Y5R5 561 aa11.49□□□□□ -0.57
CUL4A-212ENST00000617546 STK24Q9Y6E0 443 aa11.49□□□□□ -0.57
CUL4A-212ENST00000617546 MBD5Q9P267 1494 aa11.49□□□□□ -0.57
CUL4A-212ENST00000617546 KIF1CO43896 1103 aaKnown RBP11.49□□□□□ -0.57
CUL4A-212ENST00000617546 NR1I2O75469 434 aa11.49□□□□□ -0.57
CUL4A-212ENST00000617546 HOXA7P31268 230 aaPredicted RBP11.49□□□□□ -0.57
CUL4A-212ENST00000617546 CCDC174Q6PII3 467 aa11.49□□□□□ -0.57
CUL4A-212ENST00000617546 LDHAL6AQ6ZMR3 332 aa11.49□□□□□ -0.57
CUL4A-212ENST00000617546 SEC62Q99442 399 aaKnown RBP11.49□□□□□ -0.57
CUL4A-212ENST00000617546 UBA5Q9GZZ9 404 aa11.49□□□□□ -0.57
CUL4A-212ENST00000617546 CSRNP2Q9H175 543 aa11.49□□□□□ -0.57
CUL4A-212ENST00000617546 SPATS2LQ9NUQ6 558 aaKnown RBP11.49□□□□□ -0.57
CUL4A-212ENST00000617546 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.49□□□□□ -0.571e-5■■■■□ 19.8
CUL4A-212ENST00000617546 ADAMTS12P58397 1594 aa11.49□□□□□ -0.57
CUL4A-212ENST00000617546 TTC37Q6PGP7 1564 aa11.49□□□□□ -0.57
CUL4A-212ENST00000617546 MACROD2A1Z1Q3 448 aa11.49□□□□□ -0.57
CUL4A-212ENST00000617546 RBBP5Q15291 538 aaKnown RBP11.49□□□□□ -0.57
CUL4A-212ENST00000617546 MPRIPQ6WCQ1 1025 aa11.49□□□□□ -0.57
CUL4A-212ENST00000617546 MMS22LQ6ZRQ5 1243 aa11.49□□□□□ -0.57
CUL4A-212ENST00000617546 CFAP57Q96MR6 1250 aa11.49□□□□□ -0.57
CUL4A-212ENST00000617546 RAB17Q9H0T7 212 aa11.49□□□□□ -0.57
CUL4A-212ENST00000617546 TSPY2A6NKD2 308 aa11.48□□□□□ -0.57
CUL4A-212ENST00000617546 MXRA7P84157 204 aa11.48□□□□□ -0.57
CUL4A-212ENST00000617546 ATP2B3Q16720 1220 aa11.48□□□□□ -0.57
CUL4A-212ENST00000617546 SLC9C1Q4G0N8 1177 aa11.48□□□□□ -0.57
CUL4A-212ENST00000617546 OR8K1Q8NGG5 319 aa11.48□□□□□ -0.57
CUL4A-212ENST00000617546 PPP1R14CQ8TAE6 165 aa11.48□□□□□ -0.57
CUL4A-212ENST00000617546 CD109Q6YHK3 1445 aa11.48□□□□□ -0.57
CUL4A-212ENST00000617546 ACEP12821 1306 aa11.48□□□□□ -0.57
CUL4A-212ENST00000617546 E7EVH7 732 aa11.48□□□□□ -0.57
CUL4A-212ENST00000617546 RPL13P26373 211 aaKnown RBP11.48□□□□□ -0.57
CUL4A-212ENST00000617546 GSTO1P78417 241 aa11.48□□□□□ -0.57
CUL4A-212ENST00000617546 GKAP1Q5VSY0 366 aaPredicted RBP11.48□□□□□ -0.57
CUL4A-212ENST00000617546 TTC6Q86TZ1 520 aa11.48□□□□□ -0.57
CUL4A-212ENST00000617546 RNF10Q8N5U6 811 aaKnown RBP11.48□□□□□ -0.57
CUL4A-212ENST00000617546 PDE11AQ9HCR9 933 aa11.48□□□□□ -0.57
CUL4A-212ENST00000617546 NEBLO76041 1014 aa11.48□□□□□ -0.57
CUL4A-212ENST00000617546 CLCN6P51797 869 aa11.48□□□□□ -0.57
CUL4A-212ENST00000617546 SSH3Q8TE77 659 aa11.48□□□□□ -0.57
CUL4A-212ENST00000617546 RTEL1Q9NZ71 1219 aa11.48□□□□□ -0.57
CUL4A-212ENST00000617546 ANGEL1Q9UNK9 670 aaKnown RBP11.48□□□□□ -0.57
CUL4A-212ENST00000617546 BAG3O95817 575 aa11.48□□□□□ -0.57
CUL4A-212ENST00000617546 ATP2B2Q01814 1243 aa11.48□□□□□ -0.57
CUL4A-212ENST00000617546 MTHFSDQ2M296 383 aaKnown RBP11.48□□□□□ -0.57
CUL4A-212ENST00000617546 KRT79Q5XKE5 535 aa11.48□□□□□ -0.57
CUL4A-212ENST00000617546 DZIP1Q86YF9 867 aaKnown RBP11.48□□□□□ -0.57
CUL4A-212ENST00000617546 PHACTR3Q96KR7 559 aa11.48□□□□□ -0.57
CUL4A-212ENST00000617546 TSNARE1Q96NA8 513 aa11.48□□□□□ -0.57
CUL4A-212ENST00000617546 RNF14Q9UBS8 474 aa11.48□□□□□ -0.57
CUL4A-212ENST00000617546 NOL3O60936 208 aaKnown RBP11.47□□□□□ -0.57
CUL4A-212ENST00000617546 PNMA6AP0CW24 399 aaPredicted RBP11.47□□□□□ -0.57
CUL4A-212ENST00000617546 ERCC3P19447 782 aa11.47□□□□□ -0.57
CUL4A-212ENST00000617546 HPDP32754 393 aaPredicted RBP11.47□□□□□ -0.57
CUL4A-212ENST00000617546 MYSM1Q5VVJ2 828 aa11.47□□□□□ -0.57
CUL4A-212ENST00000617546 TOM1L2Q6ZVM7 507 aa11.47□□□□□ -0.57
CUL4A-212ENST00000617546 CDC5LQ99459 802 aaKnown RBP11.47□□□□□ -0.57
CUL4A-212ENST00000617546 LARSQ9P2J5 1176 aaKnown RBP11.47□□□□□ -0.57
CUL4A-212ENST00000617546 PRDM15P57071 1507 aaPredicted RBP11.47□□□□□ -0.57
CUL4A-212ENST00000617546 ERCC5P28715 1186 aaPredicted RBP11.47□□□□□ -0.57
CUL4A-212ENST00000617546 GNA11P29992 359 aa11.47□□□□□ -0.57
CUL4A-212ENST00000617546 GCKP35557 465 aa11.47□□□□□ -0.57
CUL4A-212ENST00000617546 HNRNPH2P55795 449 aaKnown RBP11.47□□□□□ -0.57
CUL4A-212ENST00000617546 GRIPAP1Q4V328 841 aa11.47□□□□□ -0.57
CUL4A-212ENST00000617546 ANKLE2Q86XL3 938 aa11.47□□□□□ -0.57
CUL4A-212ENST00000617546 CACTINQ8WUQ7 758 aaKnown RBP11.47□□□□□ -0.57
CUL4A-212ENST00000617546 IRX4P78413 519 aa11.47□□□□□ -0.57
CUL4A-212ENST00000617546 PKP1Q13835 747 aa11.47□□□□□ -0.57
CUL4A-212ENST00000617546 VCX3BQ9H321 246 aa11.47□□□□□ -0.57
CUL4A-212ENST00000617546 FERP16591 822 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms