RNA–Protein interactions for RNA: ENST00000616952.1

AP003900.1-202, humanhuman

TSL 3

Gene AP003900.1, Length 225 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003900.1-202ENST00000616952 ZKSCAN4Q969J2 545 aaPredicted RBP13.47□□□□□ -0.25
AP003900.1-202ENST00000616952 WRNIP1Q96S55 665 aa13.47□□□□□ -0.25
AP003900.1-202ENST00000616952 GAS2L1Q99501 681 aaPredicted RBP13.47□□□□□ -0.25
AP003900.1-202ENST00000616952 WDFY4Q6ZS81 3184 aa13.46□□□□□ -0.25
AP003900.1-202ENST00000616952 F8W031 263 aaPredicted RBP13.46□□□□□ -0.25
AP003900.1-202ENST00000616952 TRIM32Q13049 653 aa13.46□□□□□ -0.25
AP003900.1-202ENST00000616952 MOGSQ13724 837 aa13.46□□□□□ -0.25
AP003900.1-202ENST00000616952 PDE3AQ14432 1141 aa13.46□□□□□ -0.25
AP003900.1-202ENST00000616952 ANKRD18AQ8IVF6 992 aa13.46□□□□□ -0.25
AP003900.1-202ENST00000616952 TMEM39BQ9GZU3 492 aa13.46□□□□□ -0.25
AP003900.1-202ENST00000616952 PCDHGA4Q9Y5G9 962 aa13.46□□□□□ -0.25
AP003900.1-202ENST00000616952 CFAP54Q96N23 3096 aa13.45□□□□□ -0.26
AP003900.1-202ENST00000616952 DNAJB2P25686 324 aa13.45□□□□□ -0.26
AP003900.1-202ENST00000616952 CCT4P50991 539 aaKnown RBP13.45□□□□□ -0.26
AP003900.1-202ENST00000616952 PPATQ06203 517 aa13.45□□□□□ -0.26
AP003900.1-202ENST00000616952 CCDC152Q4G0S7 254 aa13.45□□□□□ -0.26
AP003900.1-202ENST00000616952 AMER1Q5JTC6 1135 aaPredicted RBP13.45□□□□□ -0.26
AP003900.1-202ENST00000616952 RIC3Q7Z5B4 369 aa13.45□□□□□ -0.26
AP003900.1-202ENST00000616952 COA7Q96BR5 231 aa13.45□□□□□ -0.26
AP003900.1-202ENST00000616952 ZNF576Q9H609 170 aa13.45□□□□□ -0.26
AP003900.1-202ENST00000616952 RYDENQ9NUL5 291 aaKnown RBP13.45□□□□□ -0.26
AP003900.1-202ENST00000616952 CXXC1Q9P0U4 656 aaPredicted RBP13.45□□□□□ -0.26
AP003900.1-202ENST00000616952 USP34Q70CQ2 3546 aa13.44□□□□□ -0.26
AP003900.1-202ENST00000616952 SMIM22K7EJ46 135 aa13.44□□□□□ -0.26
AP003900.1-202ENST00000616952 NUDT7P0C024 238 aa13.44□□□□□ -0.26
AP003900.1-202ENST00000616952 RBM5P52756 815 aaKnown RBP eCLIP13.44□□□□□ -0.26
AP003900.1-202ENST00000616952 ISCA1Q9BUE6 129 aa13.44□□□□□ -0.26
AP003900.1-202ENST00000616952 ZNF70Q9UC06 446 aaPredicted RBP13.44□□□□□ -0.26
AP003900.1-202ENST00000616952 KCNH4Q9UQ05 1017 aa13.44□□□□□ -0.26
AP003900.1-202ENST00000616952 ATP5J2-PTCD1G3V325 749 aa13.43□□□□□ -0.26
AP003900.1-202ENST00000616952 EIF2S2P20042 333 aaKnown RBP13.43□□□□□ -0.26
AP003900.1-202ENST00000616952 KLRK1P26718 216 aa13.43□□□□□ -0.26
AP003900.1-202ENST00000616952 CCDC85BQ15834 202 aaPredicted RBP13.43□□□□□ -0.26
AP003900.1-202ENST00000616952 REV3LO60673 3130 aa13.43□□□□□ -0.26
AP003900.1-202ENST00000616952 KCNQ1P51787 676 aa13.42□□□□□ -0.26
AP003900.1-202ENST00000616952 GPAT2Q6NUI2 795 aa13.42□□□□□ -0.26
AP003900.1-202ENST00000616952 RNPC3Q96LT9 517 aaKnown RBP13.42□□□□□ -0.26
AP003900.1-202ENST00000616952 CCDC85AQ96PX6 553 aaPredicted RBP13.42□□□□□ -0.26
AP003900.1-202ENST00000616952 CHD9Q3L8U1 2897 aa13.42□□□□□ -0.26
AP003900.1-202ENST00000616952 TCP10L2B9ZVM9 353 aa13.41□□□□□ -0.26
AP003900.1-202ENST00000616952 TNNI2P48788 182 aa13.41□□□□□ -0.26
AP003900.1-202ENST00000616952 TFF2Q03403 129 aa13.41□□□□□ -0.26
AP003900.1-202ENST00000616952 AAK1Q2M2I8 961 aa13.41□□□□□ -0.26
AP003900.1-202ENST00000616952 MAP3K21Q5TCX8 1036 aa13.41□□□□□ -0.26
AP003900.1-202ENST00000616952 GPHNQ9NQX3 736 aaPredicted RBP13.41□□□□□ -0.26
AP003900.1-202ENST00000616952 MINPP1Q9UNW1 487 aa13.41□□□□□ -0.26
AP003900.1-202ENST00000616952 PRR33A8MZF0 331 aa13.4□□□□□ -0.26
AP003900.1-202ENST00000616952 HSP90B1P14625 803 aaKnown RBP13.4□□□□□ -0.26
AP003900.1-202ENST00000616952 FOXK1P85037 733 aa13.4□□□□□ -0.26
AP003900.1-202ENST00000616952 BADQ92934 168 aa13.4□□□□□ -0.26
AP003900.1-202ENST00000616952 TIFAQ96CG3 184 aa13.4□□□□□ -0.26
AP003900.1-202ENST00000616952 PRDM12Q9H4Q4 367 aa13.4□□□□□ -0.26
AP003900.1-202ENST00000616952 TDRD3Q9H7E2 651 aaKnown RBP13.4□□□□□ -0.26
AP003900.1-202ENST00000616952 TCF20Q9UGU0 1960 aaKnown RBP13.4□□□□□ -0.27
AP003900.1-202ENST00000616952 SMCR8Q8TEV9 937 aaPredicted RBP13.39□□□□□ -0.27
AP003900.1-202ENST00000616952 TRIB2Q92519 343 aa13.39□□□□□ -0.27
AP003900.1-202ENST00000616952 SENP6Q9GZR1 1112 aaPredicted RBP13.39□□□□□ -0.27
AP003900.1-202ENST00000616952 LEMD3Q9Y2U8 911 aa13.39□□□□□ -0.27
AP003900.1-202ENST00000616952 C5orf42Q9H799 3197 aa13.38□□□□□ -0.27
AP003900.1-202ENST00000616952 RTP1P59025 263 aa13.38□□□□□ -0.27
AP003900.1-202ENST00000616952 ADGRE1Q14246 886 aa13.38□□□□□ -0.27
AP003900.1-202ENST00000616952 PLBD2Q8NHP8 589 aa13.38□□□□□ -0.27
AP003900.1-202ENST00000616952 FBXL18Q96ME1 805 aa13.38□□□□□ -0.27
AP003900.1-202ENST00000616952 CDC5LQ99459 802 aaKnown RBP13.38□□□□□ -0.27
AP003900.1-202ENST00000616952 CD209Q9NNX6 404 aa13.38□□□□□ -0.27
AP003900.1-202ENST00000616952 PRDM5Q9NQX1 630 aaPredicted RBP13.38□□□□□ -0.27
AP003900.1-202ENST00000616952 BSDC1Q9NW68 430 aaPredicted RBP13.38□□□□□ -0.27
AP003900.1-202ENST00000616952 PBX2P40425 430 aa13.37□□□□□ -0.27
AP003900.1-202ENST00000616952 FKBP1AP62942 108 aaKnown RBP13.37□□□□□ -0.27
AP003900.1-202ENST00000616952 EIF4G2P78344 907 aaKnown RBP eCLIP13.37□□□□□ -0.27
AP003900.1-202ENST00000616952 LHX6Q9UPM6 363 aa13.37□□□□□ -0.27
AP003900.1-202ENST00000616952 ZDBF2Q9HCK1 2354 aa13.37□□□□□ -0.27
AP003900.1-202ENST00000616952 PI4K2BG5E9Z4 385 aa13.36□□□□□ -0.27
AP003900.1-202ENST00000616952 IGFBP4P22692 258 aa13.36□□□□□ -0.27
AP003900.1-202ENST00000616952 INPP5BP32019 993 aa13.36□□□□□ -0.27
AP003900.1-202ENST00000616952 TRIM28Q13263 835 aaKnown RBP13.36□□□□□ -0.27
AP003900.1-202ENST00000616952 PLPP6Q8IY26 295 aa13.36□□□□□ -0.27
AP003900.1-202ENST00000616952 PTCD2Q8WV60 388 aaKnown RBP13.36□□□□□ -0.27
AP003900.1-202ENST00000616952 RNF166Q96A37 237 aaPredicted RBP13.36□□□□□ -0.27
AP003900.1-202ENST00000616952 HOOK2Q96ED9 719 aa13.36□□□□□ -0.27
AP003900.1-202ENST00000616952 KCNH6Q9H252 994 aa13.36□□□□□ -0.27
AP003900.1-202ENST00000616952 ATP11BQ9Y2G3 1177 aa13.36□□□□□ -0.27
AP003900.1-202ENST00000616952 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.35□□□□□ -0.27
AP003900.1-202ENST00000616952 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.35□□□□□ -0.27
AP003900.1-202ENST00000616952 PDE8AO60658 829 aa13.35□□□□□ -0.27
AP003900.1-202ENST00000616952 DCAF15Q66K64 600 aa13.35□□□□□ -0.27
AP003900.1-202ENST00000616952 ANKRD13CQ8N6S4 541 aa13.35□□□□□ -0.27
AP003900.1-202ENST00000616952 SERPINA10Q9UK55 444 aa13.35□□□□□ -0.27
AP003900.1-202ENST00000616952 CHD7Q9P2D1 2997 aa13.35□□□□□ -0.27
AP003900.1-202ENST00000616952 SPEF2Q9C093 1822 aa13.34□□□□□ -0.27
AP003900.1-202ENST00000616952 ZFHX4Q86UP3 3567 aa13.34□□□□□ -0.27
AP003900.1-202ENST00000616952 LSM11P83369 360 aaKnown RBP eCLIP13.34□□□□□ -0.27
AP003900.1-202ENST00000616952 FAM110CQ1W6H9 321 aa13.34□□□□□ -0.27
AP003900.1-202ENST00000616952 DZIP1LQ8IYY4 767 aaKnown RBP13.34□□□□□ -0.27
AP003900.1-202ENST00000616952 UIMC1Q96RL1 719 aa13.34□□□□□ -0.27
AP003900.1-202ENST00000616952 ZNF341Q9BYN7 854 aa13.34□□□□□ -0.27
AP003900.1-202ENST00000616952 GJD2Q9UKL4 321 aa13.34□□□□□ -0.27
AP003900.1-202ENST00000616952 JAG2Q9Y219 1238 aa13.34□□□□□ -0.27
AP003900.1-202ENST00000616952 SLC45A1Q9Y2W3 748 aa13.34□□□□□ -0.27
AP003900.1-202ENST00000616952 CXCL11O14625 94 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms