RNA–Protein interactions for RNA: ENST00000616527.4

MALAT1-208, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-208ENST00000616527 HMG20BQ9P0W2 317 aa9.44□□□□□ -0.9
MALAT1-208ENST00000616527 TRMT112Q9UI30 125 aaKnown RBP9.44□□□□□ -0.9
MALAT1-208ENST00000616527 CCDC171Q6TFL3 1326 aa9.44□□□□□ -0.9
MALAT1-208ENST00000616527 SH3TC1Q8TE82 1336 aa9.44□□□□□ -0.9
MALAT1-208ENST00000616527 ATRNO75882 1429 aa9.43□□□□□ -0.9
MALAT1-208ENST00000616527 UBN2Q6ZU65 1347 aa9.43□□□□□ -0.9
MALAT1-208ENST00000616527 A0A1B0GUL7 405 aa9.43□□□□□ -0.9
MALAT1-208ENST00000616527 ZIC2O95409 532 aaPredicted RBP9.43□□□□□ -0.9
MALAT1-208ENST00000616527 HSP90AA1P07900 732 aaKnown RBP9.43□□□□□ -0.9
MALAT1-208ENST00000616527 PDIA4P13667 645 aaKnown RBP9.43□□□□□ -0.9
MALAT1-208ENST00000616527 NEK4P51957 841 aa9.43□□□□□ -0.9
MALAT1-208ENST00000616527 LRRC24Q50LG9 513 aa9.43□□□□□ -0.9
MALAT1-208ENST00000616527 RNF20Q5VTR2 975 aa9.43□□□□□ -0.9
MALAT1-208ENST00000616527 ZBTB33Q86T24 672 aa9.43□□□□□ -0.9
MALAT1-208ENST00000616527 ACSBG1Q96GR2 724 aa9.43□□□□□ -0.9
MALAT1-208ENST00000616527 GJD4Q96KN9 370 aaPredicted RBP9.43□□□□□ -0.9
MALAT1-208ENST00000616527 FSD1Q9BTV5 496 aa9.43□□□□□ -0.9
MALAT1-208ENST00000616527 UTP14AQ9BVJ6 771 aaKnown RBP9.43□□□□□ -0.9
MALAT1-208ENST00000616527 HELLSQ9NRZ9 838 aa9.43□□□□□ -0.9
MALAT1-208ENST00000616527 PALD1Q9ULE6 856 aa9.43□□□□□ -0.9
MALAT1-208ENST00000616527 CHMP3Q9Y3E7 222 aa9.43□□□□□ -0.9
MALAT1-208ENST00000616527 SNX14Q9Y5W7 946 aa9.43□□□□□ -0.9
MALAT1-208ENST00000616527 MROH5Q6ZUA9 1318 aa9.42□□□□□ -0.9
MALAT1-208ENST00000616527 FRAT2O75474 233 aaPredicted RBP9.42□□□□□ -0.9
MALAT1-208ENST00000616527 RPS6KA4O75676 772 aa9.42□□□□□ -0.9
MALAT1-208ENST00000616527 MAP4K4O95819 1239 aaPredicted RBP9.42□□□□□ -0.9
MALAT1-208ENST00000616527 CYP2E1P05181 493 aaPredicted RBP9.42□□□□□ -0.9
MALAT1-208ENST00000616527 ZFYP08048 801 aaPredicted RBP9.42□□□□□ -0.9
MALAT1-208ENST00000616527 ZKSCAN1P17029 563 aaPredicted RBP9.42□□□□□ -0.9
MALAT1-208ENST00000616527 ITGA6P23229 1130 aa9.42□□□□□ -0.9
MALAT1-208ENST00000616527 FSHRP23945 695 aa9.42□□□□□ -0.9
MALAT1-208ENST00000616527 PSMA5P28066 241 aa9.42□□□□□ -0.9
MALAT1-208ENST00000616527 MCM4P33991 863 aa9.42□□□□□ -0.9
MALAT1-208ENST00000616527 NMIQ13287 307 aaPredicted RBP9.42□□□□□ -0.9
MALAT1-208ENST00000616527 CCDC158Q5M9N0 1113 aa9.42□□□□□ -0.9
MALAT1-208ENST00000616527 SLC10A5Q5PT55 438 aa9.42□□□□□ -0.9
MALAT1-208ENST00000616527 VPS53Q5VIR6 699 aa9.42□□□□□ -0.9
MALAT1-208ENST00000616527 TREML4Q6UXN2 200 aa9.42□□□□□ -0.9
MALAT1-208ENST00000616527 VGLL2Q8N8G2 317 aa9.42□□□□□ -0.9
MALAT1-208ENST00000616527 ITPKCQ96DU7 683 aa9.42□□□□□ -0.9
MALAT1-208ENST00000616527 TTC14Q96N46 770 aa9.42□□□□□ -0.9
MALAT1-208ENST00000616527 CDV3Q9UKY7 258 aaKnown RBP9.42□□□□□ -0.9
MALAT1-208ENST00000616527 TRPC5Q9UL62 973 aaPredicted RBP9.42□□□□□ -0.9
MALAT1-208ENST00000616527 TBC1D2BQ9UPU7 963 aa9.42□□□□□ -0.9
MALAT1-208ENST00000616527 ZNF330Q9Y3S2 320 aaPredicted RBP9.42□□□□□ -0.9
MALAT1-208ENST00000616527 SPEF2Q9C093 1822 aa9.42□□□□□ -0.9
MALAT1-208ENST00000616527 KCNQ2O43526 872 aa9.41□□□□□ -0.9
MALAT1-208ENST00000616527 TAF5LO75529 589 aa9.41□□□□□ -0.9
MALAT1-208ENST00000616527 NTSR2O95665 410 aa9.41□□□□□ -0.9
MALAT1-208ENST00000616527 GPTP24298 496 aa9.41□□□□□ -0.9
MALAT1-208ENST00000616527 SSFA2P28290 1259 aa9.41□□□□□ -0.9
MALAT1-208ENST00000616527 KRT32Q14532 448 aa9.41□□□□□ -0.9
MALAT1-208ENST00000616527 MCMDC2Q4G0Z9 681 aa9.41□□□□□ -0.9
MALAT1-208ENST00000616527 TAF7LQ5H9L4 462 aa9.41□□□□□ -0.9
MALAT1-208ENST00000616527 ZMYM1Q5SVZ6 1142 aa9.41□□□□□ -0.9
MALAT1-208ENST00000616527 SUSD4Q5VX71 490 aa9.41□□□□□ -0.9
MALAT1-208ENST00000616527 MRPL14Q6P1L8 145 aaKnown RBP9.41□□□□□ -0.9
MALAT1-208ENST00000616527 LDHAL6AQ6ZMR3 332 aa9.41□□□□□ -0.9
MALAT1-208ENST00000616527 TMX3Q96JJ7 454 aa9.41□□□□□ -0.9
MALAT1-208ENST00000616527 ZSCAN31Q96LW9 406 aaPredicted RBP9.41□□□□□ -0.9
MALAT1-208ENST00000616527 GBP4Q96PP9 640 aa9.41□□□□□ -0.9
MALAT1-208ENST00000616527 OCSTAMPQ9BR26 566 aa9.41□□□□□ -0.9
MALAT1-208ENST00000616527 PUS3Q9BZE2 481 aaKnown RBP9.41□□□□□ -0.9
MALAT1-208ENST00000616527 GREM2Q9H772 168 aa9.41□□□□□ -0.9
MALAT1-208ENST00000616527 ZFAND3Q9H8U3 227 aa9.41□□□□□ -0.9
MALAT1-208ENST00000616527 PAG1Q9NWQ8 432 aa9.41□□□□□ -0.9
MALAT1-208ENST00000616527 ANKRD36CQ5JPF3 1778 aa9.41□□□□□ -0.9
MALAT1-208ENST00000616527 LRP5O75197 1615 aa9.41□□□□□ -0.9
MALAT1-208ENST00000616527 RPAP1Q9BWH6 1393 aaPredicted RBP9.4□□□□□ -0.9
MALAT1-208ENST00000616527 A0A0D9SFI3 127 aa9.4□□□□□ -0.9
MALAT1-208ENST00000616527 PDE8BO95263 885 aa9.4□□□□□ -0.9
MALAT1-208ENST00000616527 IFIT1P09914 478 aaKnown RBP9.4□□□□□ -0.9
MALAT1-208ENST00000616527 FGFR2P21802 821 aa9.4□□□□□ -0.9
MALAT1-208ENST00000616527 TIMM10P62072 90 aa9.4□□□□□ -0.9
MALAT1-208ENST00000616527 PTH1RQ03431 593 aa9.4□□□□□ -0.9
MALAT1-208ENST00000616527 SCARF1Q14162 830 aa9.4□□□□□ -0.9
MALAT1-208ENST00000616527 SF3B3Q15393 1217 aaKnown RBP9.4□□□□□ -0.9
MALAT1-208ENST00000616527 CCDC152Q4G0S7 254 aa9.4□□□□□ -0.9
MALAT1-208ENST00000616527 CREB3L3Q68CJ9 461 aa9.4□□□□□ -0.9
MALAT1-208ENST00000616527 LINC00116Q8NCU8 138 aa9.4□□□□□ -0.9
MALAT1-208ENST00000616527 SLC10A4Q96EP9 437 aa9.4□□□□□ -0.9
MALAT1-208ENST00000616527 XAGE2Q96GT9 111 aa9.4□□□□□ -0.9
MALAT1-208ENST00000616527 ZNF594Q96JF6 807 aaPredicted RBP9.4□□□□□ -0.9
MALAT1-208ENST00000616527 FAM227BQ96M60 508 aa9.4□□□□□ -0.9
MALAT1-208ENST00000616527 ZFP42Q96MM3 310 aa9.4□□□□□ -0.9
MALAT1-208ENST00000616527 NEUROD6Q96NK8 337 aa9.4□□□□□ -0.9
MALAT1-208ENST00000616527 DSCC1Q9BVC3 393 aa9.4□□□□□ -0.9
MALAT1-208ENST00000616527 TRIM34Q9BYJ4 488 aa9.4□□□□□ -0.9
MALAT1-208ENST00000616527 SH2B1Q9NRF2 756 aaPredicted RBP9.4□□□□□ -0.9
MALAT1-208ENST00000616527 NARFQ9UHQ1 456 aa9.4□□□□□ -0.9
MALAT1-208ENST00000616527 LIMCH1Q9UPQ0 1083 aa9.4□□□□□ -0.9
MALAT1-208ENST00000616527 RBM8AQ9Y5S9 174 aaKnown RBP9.4□□□□□ -0.9
MALAT1-208ENST00000616527 RIC1Q4ADV7 1423 aa9.39□□□□□ -0.91
MALAT1-208ENST00000616527 SOCS7O14512 581 aa9.39□□□□□ -0.91
MALAT1-208ENST00000616527 IGSF3O75054 1194 aa9.39□□□□□ -0.91
MALAT1-208ENST00000616527 UQCRFS1P1P0C7P4 283 aa9.39□□□□□ -0.91
MALAT1-208ENST00000616527 ANKRD1Q15327 319 aa9.39□□□□□ -0.91
MALAT1-208ENST00000616527 TTF1Q15361 905 aaPredicted RBP9.39□□□□□ -0.91
MALAT1-208ENST00000616527 PUM3Q15397 648 aaKnown RBP9.39□□□□□ -0.91
MALAT1-208ENST00000616527 ATP2B3Q16720 1220 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms