RNA–Protein interactions for RNA: ENST00000616401.1

SOX2-OT-236, SOX2 overlapping transcript, humanhuman

Gene SOX2-OT, Length 69 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-236ENST00000616401 ZAR1LA6NP61 321 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 ARVCFO00192 962 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 FOXN1O15353 648 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 UGDHO60701 494 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 SEMA7AO75326 666 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 RHOBTB3O94955 611 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 LDLRP01130 860 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 ITGB1P05556 798 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 RNASE1P07998 156 aaKnown RBP-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 SNHG28P0DPA3 235 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 GM2AP17900 193 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 PCSK6P29122 969 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 NOS3P29474 1203 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 PTGER1P34995 402 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 IL6STP40189 918 aaPredicted RBP-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 MLLT10P55197 1068 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 COASYQ13057 564 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 ARID5BQ14865 1188 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 R3HDM1Q15032 1099 aaKnown RBP-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 SHHQ15465 462 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 CHRNA2Q15822 529 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 FAM98CQ17RN3 349 aaKnown RBP-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 LEXMQ3ZCV2 418 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 DACT2Q5SW24 774 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 LIPKQ5VXJ0 399 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 ICE2Q659A1 982 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 SPINK14Q6IE38 97 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 LRFN4Q6PJG9 635 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 LAYNQ6UX15 382 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 USP48Q86UV5 1035 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 RNF135Q8IUD6 432 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 STK11IPQ8N1F8 1099 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 DTX3Q8N9I9 347 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 TP53I13Q8NBR0 393 aaPredicted RBP-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 PROCA1Q8NCQ7 364 aaPredicted RBP-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 LRRN4CLQ8ND94 238 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 SMARCC2Q8TAQ2 1214 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 NEU4Q8WWR8 484 aaPredicted RBP-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 EDEM1Q92611 657 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 ZNF48Q96MX3 618 aaPredicted RBP-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 FCRL4Q96PJ5 515 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 ARXQ96QS3 562 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 NABP2Q9BQ15 211 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 SSBP3Q9BWW4 388 aaPredicted RBP-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 CFHR5Q9BXR6 569 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 SLC29A3Q9BZD2 475 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 KLC2Q9H0B6 622 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 MEGF9Q9H1U4 602 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 NSUN3Q9H649 340 aaKnown RBP-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 PELI2Q9HAT8 420 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 RETNQ9HD89 108 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 PRR34Q9NV39 138 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 OGFRQ9NZT2 677 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 DNMT3BQ9UBC3 853 aaKnown RBP-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 STOML1Q9UBI4 398 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 TNFRSF10DQ9UBN6 386 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 ZNF70Q9UC06 446 aaPredicted RBP-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 MARCOQ9UEW3 520 aaPredicted RBP-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 ZKSCAN5Q9Y2L8 839 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 PCDHB13Q9Y5F0 798 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 PALLDQ8WX93 1383 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 MYO16Q9Y6X6 1858 aa-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 ZFC3H1O60293 1989 aaKnown RBP-0.63□□□□□ -2.51
SOX2-OT-236ENST00000616401 SOS1Q07889 1333 aaPredicted RBP-0.64□□□□□ -2.51
SOX2-OT-236ENST00000616401 COL22A1Q8NFW1 1626 aaPredicted RBP-0.64□□□□□ -2.51
SOX2-OT-236ENST00000616401 MUC21A0A0G2JKD1 596 aa-0.64□□□□□ -2.51
SOX2-OT-236ENST00000616401 MUC21A0A140T8X8 626 aa-0.64□□□□□ -2.51
SOX2-OT-236ENST00000616401 NPEPPSL1A6NEC2 478 aa-0.64□□□□□ -2.51
SOX2-OT-236ENST00000616401 J3QKU1 62 aa-0.64□□□□□ -2.51
SOX2-OT-236ENST00000616401 PEX10O60683 326 aa-0.64□□□□□ -2.51
SOX2-OT-236ENST00000616401 SEC24DO94855 1032 aaPredicted RBP-0.64□□□□□ -2.51
SOX2-OT-236ENST00000616401 UPP2O95045 317 aa-0.64□□□□□ -2.51
SOX2-OT-236ENST00000616401 SCAF4O95104 1147 aaKnown RBP-0.64□□□□□ -2.51
SOX2-OT-236ENST00000616401 ARIH2O95376 493 aa-0.64□□□□□ -2.51
SOX2-OT-236ENST00000616401 WISP1O95388 367 aa-0.64□□□□□ -2.51
SOX2-OT-236ENST00000616401 ALDH1A1P00352 501 aa-0.64□□□□□ -2.51
SOX2-OT-236ENST00000616401 DUX4L4P0CJ87 422 aa-0.64□□□□□ -2.51
SOX2-OT-236ENST00000616401 CGB3P0DN86 165 aa-0.64□□□□□ -2.51
SOX2-OT-236ENST00000616401 ARAFP10398 606 aa-0.64□□□□□ -2.51
SOX2-OT-236ENST00000616401 TIMP2P16035 220 aa-0.64□□□□□ -2.51
SOX2-OT-236ENST00000616401 ZNF10P21506 573 aaPredicted RBP-0.64□□□□□ -2.51
SOX2-OT-236ENST00000616401 ZBTB25P24278 435 aa-0.64□□□□□ -2.51
SOX2-OT-236ENST00000616401 AFMP43652 599 aa-0.64□□□□□ -2.51
SOX2-OT-236ENST00000616401 IREB2P48200 963 aaKnown RBP-0.64□□□□□ -2.51
SOX2-OT-236ENST00000616401 CCT4P50991 539 aaKnown RBP-0.64□□□□□ -2.51
SOX2-OT-236ENST00000616401 APLP1P51693 650 aa-0.64□□□□□ -2.51
SOX2-OT-236ENST00000616401 AFF3P51826 1226 aaKnown RBP-0.64□□□□□ -2.51
SOX2-OT-236ENST00000616401 KCNH2Q12809 1159 aa-0.64□□□□□ -2.51
SOX2-OT-236ENST00000616401 MKRN3Q13064 507 aaKnown RBP-0.64□□□□□ -2.51
SOX2-OT-236ENST00000616401 LAMB3Q13751 1172 aa-0.64□□□□□ -2.51
SOX2-OT-236ENST00000616401 PRKD1Q15139 912 aaPredicted RBP-0.64□□□□□ -2.51
SOX2-OT-236ENST00000616401 TCEA2Q15560 299 aa-0.64□□□□□ -2.51
SOX2-OT-236ENST00000616401 FAM189A2Q15884 450 aa-0.64□□□□□ -2.51
SOX2-OT-236ENST00000616401 KRTAP20-1Q3LI63 56 aa-0.64□□□□□ -2.51
SOX2-OT-236ENST00000616401 CCDC157Q569K6 752 aa-0.64□□□□□ -2.51
SOX2-OT-236ENST00000616401 MUC21Q5SSG8 566 aa-0.64□□□□□ -2.51
SOX2-OT-236ENST00000616401 DCAF15Q66K64 600 aa-0.64□□□□□ -2.51
SOX2-OT-236ENST00000616401 IGFL4Q6B9Z1 124 aa-0.64□□□□□ -2.51
SOX2-OT-236ENST00000616401 MPZL3Q6UWV2 235 aa-0.64□□□□□ -2.51
SOX2-OT-236ENST00000616401 BNC2Q6ZN30 1099 aaPredicted RBP-0.64□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms