RNA–Protein interactions for RNA: ENST00000616315.1

NEAT1-205, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 483 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-205ENST00000616315 RC3H2Q9HBD1 1191 aaKnown RBP7.04□□□□□ -1.28
NEAT1-205ENST00000616315 FARP2O94887 1054 aaPredicted RBP7.03□□□□□ -1.28
NEAT1-205ENST00000616315 VAMP1P23763 118 aa7.03□□□□□ -1.28
NEAT1-205ENST00000616315 TAGLNQ01995 201 aaKnown RBP7.03□□□□□ -1.28
NEAT1-205ENST00000616315 CYP27C1Q4G0S4 372 aa7.03□□□□□ -1.28
NEAT1-205ENST00000616315 MISP3Q96FF7 219 aa7.03□□□□□ -1.28
NEAT1-205ENST00000616315 WDR89Q96FK6 387 aaPredicted RBP7.03□□□□□ -1.28
NEAT1-205ENST00000616315 FAM129BQ96TA1 746 aa7.03□□□□□ -1.28
NEAT1-205ENST00000616315 IGSF5Q9NSI5 407 aa7.03□□□□□ -1.28
NEAT1-205ENST00000616315 KRTAP9-7A8MTY7 169 aa7.02□□□□□ -1.29
NEAT1-205ENST00000616315 TMPRSS2O15393 492 aa7.02□□□□□ -1.29
NEAT1-205ENST00000616315 FAM87AP0C7U9 286 aa7.02□□□□□ -1.29
NEAT1-205ENST00000616315 USPL1Q5W0Q7 1092 aa7.02□□□□□ -1.29
NEAT1-205ENST00000616315 NETO1Q8TDF5 533 aa7.02□□□□□ -1.29
NEAT1-205ENST00000616315 ZNF576Q9H609 170 aa7.02□□□□□ -1.29
NEAT1-205ENST00000616315 ZFYVE1Q9HBF4 777 aa7.02□□□□□ -1.29
NEAT1-205ENST00000616315 GPR182O15218 404 aa7.01□□□□□ -1.29
NEAT1-205ENST00000616315 IGHA2P01877 340 aa7.01□□□□□ -1.29
NEAT1-205ENST00000616315 LIG1P18858 919 aa7.01□□□□□ -1.29
NEAT1-205ENST00000616315 FGD1P98174 961 aa7.01□□□□□ -1.29
NEAT1-205ENST00000616315 PDE3AQ14432 1141 aa7.01□□□□□ -1.29
NEAT1-205ENST00000616315 DSC3Q14574 896 aa7.01□□□□□ -1.29
NEAT1-205ENST00000616315 LRRN4CLQ8ND94 238 aa7.01□□□□□ -1.29
NEAT1-205ENST00000616315 TMEM40Q8WWA1 233 aa7.01□□□□□ -1.29
NEAT1-205ENST00000616315 ALKBH8Q96BT7 664 aaKnown RBP7.01□□□□□ -1.29
NEAT1-205ENST00000616315 MAPK8P45983 427 aa7□□□□□ -1.29
NEAT1-205ENST00000616315 PLCB3Q01970 1234 aa7□□□□□ -1.29
NEAT1-205ENST00000616315 MESP2Q0VG99 397 aa7□□□□□ -1.29
NEAT1-205ENST00000616315 KIAA0319Q5VV43 1072 aa7□□□□□ -1.29
NEAT1-205ENST00000616315 KRTAP4-11Q9BYQ6 195 aa7□□□□□ -1.29
NEAT1-205ENST00000616315 CRIM1Q9NZV1 1036 aa7□□□□□ -1.29
NEAT1-205ENST00000616315 VAV3Q9UKW4 847 aa7□□□□□ -1.29
NEAT1-205ENST00000616315 SYNGAP1Q96PV0 1343 aa7□□□□□ -1.29
NEAT1-205ENST00000616315 LEFTY1O75610 366 aa6.99□□□□□ -1.29
NEAT1-205ENST00000616315 TCF3P15923 654 aa6.99□□□□□ -1.29
NEAT1-205ENST00000616315 ITPKAP23677 461 aa6.99□□□□□ -1.29
NEAT1-205ENST00000616315 PRKCQQ04759 706 aa6.99□□□□□ -1.29
NEAT1-205ENST00000616315 PI4K2BQ8TCG2 481 aa6.99□□□□□ -1.29
NEAT1-205ENST00000616315 FANCD2OSQ96PS1 177 aa6.99□□□□□ -1.29
NEAT1-205ENST00000616315 CCDC86Q9H6F5 360 aaKnown RBP6.99□□□□□ -1.29
NEAT1-205ENST00000616315 ZNF862O60290 1169 aa6.98□□□□□ -1.29
NEAT1-205ENST00000616315 PRPF40AO75400 957 aaKnown RBP6.98□□□□□ -1.29
NEAT1-205ENST00000616315 RECKO95980 971 aa6.98□□□□□ -1.29
NEAT1-205ENST00000616315 LDHBP07195 334 aaKnown RBP6.98□□□□□ -1.29
NEAT1-205ENST00000616315 ATP2B2Q01814 1243 aa6.98□□□□□ -1.29
NEAT1-205ENST00000616315 KSR1Q8IVT5 923 aa6.98□□□□□ -1.29
NEAT1-205ENST00000616315 DDX54Q8TDD1 881 aaKnown RBP6.98□□□□□ -1.29
NEAT1-205ENST00000616315 ZC3H12CQ9C0D7 883 aaKnown RBP6.98□□□□□ -1.29
NEAT1-205ENST00000616315 DISC1Q9NRI5 854 aa6.98□□□□□ -1.29
NEAT1-205ENST00000616315 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.98□□□□□ -1.29
NEAT1-205ENST00000616315 PLAGL2Q9UPG8 496 aa6.98□□□□□ -1.29
NEAT1-205ENST00000616315 OXCT1P55809 520 aa6.97□□□□□ -1.29
NEAT1-205ENST00000616315 PKN1Q16512 942 aa6.97□□□□□ -1.29
NEAT1-205ENST00000616315 AOC3Q16853 763 aa6.97□□□□□ -1.29
NEAT1-205ENST00000616315 CILP2Q8IUL8 1156 aa6.97□□□□□ -1.29
NEAT1-205ENST00000616315 NIF3L1Q9GZT8 377 aa6.97□□□□□ -1.29
NEAT1-205ENST00000616315 ITGAEP38570 1179 aa6.96□□□□□ -1.3
NEAT1-205ENST00000616315 AP3B2Q13367 1082 aa6.96□□□□□ -1.3
NEAT1-205ENST00000616315 SMYD4Q8IYR2 804 aaPredicted RBP6.96□□□□□ -1.3
NEAT1-205ENST00000616315 EHD4Q9H223 541 aa6.96□□□□□ -1.3
NEAT1-205ENST00000616315 PCDHGC5Q9Y5F6 944 aa6.96□□□□□ -1.3
NEAT1-205ENST00000616315 PNMA6FA0A0J9YX94 578 aa6.95□□□□□ -1.3
NEAT1-205ENST00000616315 ZNF157P51786 506 aaPredicted RBP6.95□□□□□ -1.3
NEAT1-205ENST00000616315 XPCQ01831 940 aaPredicted RBP6.95□□□□□ -1.3
NEAT1-205ENST00000616315 ID3Q02535 119 aa6.95□□□□□ -1.3
NEAT1-205ENST00000616315 FAAP100Q0VG06 881 aa6.95□□□□□ -1.3
NEAT1-205ENST00000616315 MRPL58Q14197 206 aaKnown RBP6.95□□□□□ -1.3
NEAT1-205ENST00000616315 ENOX2Q16206 610 aaKnown RBP6.95□□□□□ -1.3
NEAT1-205ENST00000616315 IFI16Q16666 785 aaKnown RBP6.95□□□□□ -1.3
NEAT1-205ENST00000616315 TSNAXIP1Q2TAA8 658 aa6.95□□□□□ -1.3
NEAT1-205ENST00000616315 DUSP23Q9BVJ7 150 aa6.95□□□□□ -1.3
NEAT1-205ENST00000616315 ATXN3LQ9H3M9 355 aa6.95□□□□□ -1.3
NEAT1-205ENST00000616315 PIDD1Q9HB75 910 aa6.95□□□□□ -1.3
NEAT1-205ENST00000616315 ABCB6Q9NP58 842 aa6.95□□□□□ -1.3
NEAT1-205ENST00000616315 PRDM7Q9NQW5 492 aa6.95□□□□□ -1.3
NEAT1-205ENST00000616315 CEACAM5P06731 702 aa6.94□□□□□ -1.3
NEAT1-205ENST00000616315 TTLL4Q14679 1199 aa6.94□□□□□ -1.3
NEAT1-205ENST00000616315 ALG1LQ6GMV1 187 aa6.94□□□□□ -1.3
NEAT1-205ENST00000616315 HRASLS5Q96KN8 279 aa6.94□□□□□ -1.3
NEAT1-205ENST00000616315 DUSP9Q99956 384 aaKnown RBP6.94□□□□□ -1.3
NEAT1-205ENST00000616315 MKNK2Q9HBH9 465 aa6.94□□□□□ -1.3
NEAT1-205ENST00000616315 MRS2Q9HD23 443 aa6.94□□□□□ -1.3
NEAT1-205ENST00000616315 NPHS2Q9NP85 383 aa6.94□□□□□ -1.3
NEAT1-205ENST00000616315 PARP2Q9UGN5 583 aa6.94□□□□□ -1.3
NEAT1-205ENST00000616315 ZNF503-AS2A6NEH8 195 aa6.93□□□□□ -1.3
NEAT1-205ENST00000616315 NEFLP07196 543 aa6.93□□□□□ -1.3
NEAT1-205ENST00000616315 HCLS1P14317 486 aaPredicted RBP6.93□□□□□ -1.3
NEAT1-205ENST00000616315 PTPN12Q05209 780 aaKnown RBP6.93□□□□□ -1.3
NEAT1-205ENST00000616315 ORC1Q13415 861 aa6.93□□□□□ -1.3
NEAT1-205ENST00000616315 KIF4BQ2VIQ3 1234 aa6.93□□□□□ -1.3
NEAT1-205ENST00000616315 FAM84AQ96KN4 292 aa6.93□□□□□ -1.3
NEAT1-205ENST00000616315 SLC38A3Q99624 504 aa6.93□□□□□ -1.3
NEAT1-205ENST00000616315 WWC3Q9ULE0 1092 aa6.93□□□□□ -1.3
NEAT1-205ENST00000616315 LRRC10BA6NIK2 292 aa6.92□□□□□ -1.3
NEAT1-205ENST00000616315 RNGTTO60942 597 aaKnown RBP6.92□□□□□ -1.3
NEAT1-205ENST00000616315 NEFMP07197 916 aa6.92□□□□□ -1.3
NEAT1-205ENST00000616315 SLFN14P0C7P3 912 aa6.92□□□□□ -1.3
NEAT1-205ENST00000616315 PSMD2Q13200 908 aa6.92□□□□□ -1.3
NEAT1-205ENST00000616315 SLC23A3Q6PIS1 610 aa6.92□□□□□ -1.3
NEAT1-205ENST00000616315 TMC4Q7Z404 712 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms