RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 SPTY2D1Q68D10 685 aaPredicted RBP13.73□□□□□ -0.21
SLIRP-212ENST00000613856 PODNQ7Z5L7 613 aa13.73□□□□□ -0.21
SLIRP-212ENST00000613856 REM2Q8IYK8 340 aaPredicted RBP13.73□□□□□ -0.21
SLIRP-212ENST00000613856 TBC1D22AQ8WUA7 517 aa13.73□□□□□ -0.21
SLIRP-212ENST00000613856 TBC1D32Q96NH3 1257 aa13.73□□□□□ -0.21
SLIRP-212ENST00000613856 CCDC171Q6TFL3 1326 aa13.72□□□□□ -0.21
SLIRP-212ENST00000613856 SZT2Q5T011 3432 aa13.72□□□□□ -0.21
SLIRP-212ENST00000613856 LAMA4Q16363 1823 aa13.72□□□□□ -0.21
SLIRP-212ENST00000613856 FKTNO75072 461 aa13.72□□□□□ -0.21
SLIRP-212ENST00000613856 RBM25P49756 843 aaKnown RBP13.72□□□□□ -0.21
SLIRP-212ENST00000613856 FXR1P51114 621 aaKnown RBP eCLIP13.72□□□□□ -0.21
SLIRP-212ENST00000613856 CHAF1AQ13111 956 aaPredicted RBP13.72□□□□□ -0.21
SLIRP-212ENST00000613856 SLC9C2Q5TAH2 1124 aa13.72□□□□□ -0.21
SLIRP-212ENST00000613856 USP26Q9BXU7 913 aa13.72□□□□□ -0.21
SLIRP-212ENST00000613856 LRP2BPQ9P2M1 347 aa13.72□□□□□ -0.21
SLIRP-212ENST00000613856 ZSWIM8A7E2V4 1837 aa13.71□□□□□ -0.21
SLIRP-212ENST00000613856 SSC5DA1L4H1 1573 aa13.71□□□□□ -0.21
SLIRP-212ENST00000613856 ZNF532Q9HCE3 1301 aa13.71□□□□□ -0.21
SLIRP-212ENST00000613856 USP17L3A6NCW0 530 aa13.71□□□□□ -0.21
SLIRP-212ENST00000613856 USP17L4A6NCW7 530 aa13.71□□□□□ -0.21
SLIRP-212ENST00000613856 WNT10BO00744 389 aa13.71□□□□□ -0.21
SLIRP-212ENST00000613856 CHGBP05060 677 aa13.71□□□□□ -0.21
SLIRP-212ENST00000613856 FKBP1AP62942 108 aaKnown RBP13.71□□□□□ -0.21
SLIRP-212ENST00000613856 ERICH6Q7L0X2 663 aa13.71□□□□□ -0.21
SLIRP-212ENST00000613856 OTOP1Q7RTM1 612 aa13.71□□□□□ -0.21
SLIRP-212ENST00000613856 USP17L1Q7RTZ2 530 aa13.71□□□□□ -0.21
SLIRP-212ENST00000613856 ZNF589Q86UQ0 364 aaPredicted RBP13.71□□□□□ -0.21
SLIRP-212ENST00000613856 OSBP2Q969R2 916 aa13.71□□□□□ -0.21
SLIRP-212ENST00000613856 C22orf23Q9BZE7 217 aa13.71□□□□□ -0.21
SLIRP-212ENST00000613856 LSG1Q9H089 658 aaKnown RBP13.71□□□□□ -0.21
SLIRP-212ENST00000613856 ANO2Q9NQ90 1003 aa13.71□□□□□ -0.21
SLIRP-212ENST00000613856 ABCF2Q9UG63 623 aa13.71□□□□□ -0.21
SLIRP-212ENST00000613856 SUGT1Q9Y2Z0 365 aa13.71□□□□□ -0.21
SLIRP-212ENST00000613856 TRIM17Q9Y577 477 aa13.71□□□□□ -0.21
SLIRP-212ENST00000613856 EN2P19622 333 aaPredicted RBP13.7□□□□□ -0.22
SLIRP-212ENST00000613856 NOM1Q5C9Z4 860 aaKnown RBP13.7□□□□□ -0.22
SLIRP-212ENST00000613856 DACT2Q5SW24 774 aa13.7□□□□□ -0.22
SLIRP-212ENST00000613856 KIAA1211Q6ZU35 1233 aa13.7□□□□□ -0.22
SLIRP-212ENST00000613856 MAGEB6Q8N7X4 407 aa13.7□□□□□ -0.22
SLIRP-212ENST00000613856 NSUN4Q96CB9 384 aaKnown RBP13.7□□□□□ -0.22
SLIRP-212ENST00000613856 RAI14Q9P0K7 980 aa13.7□□□□□ -0.22
SLIRP-212ENST00000613856 PCDHAC2Q9Y5I4 1007 aa13.7□□□□□ -0.22
SLIRP-212ENST00000613856 OTOFQ9HC10 1997 aa13.69□□□□□ -0.22
SLIRP-212ENST00000613856 M0R2C6 588 aa13.69□□□□□ -0.22
SLIRP-212ENST00000613856 IGF2BP3O00425 579 aaKnown RBP eCLIP13.69□□□□□ -0.22
SLIRP-212ENST00000613856 LDHBP07195 334 aaKnown RBP13.69□□□□□ -0.22
SLIRP-212ENST00000613856 PRDX5P30044 214 aa13.69□□□□□ -0.22
SLIRP-212ENST00000613856 SLFNL1Q499Z3 407 aa13.69□□□□□ -0.22
SLIRP-212ENST00000613856 STRIP1Q5VSL9 837 aa13.69□□□□□ -0.22
SLIRP-212ENST00000613856 SPRYD7Q5W111 196 aa13.69□□□□□ -0.22
SLIRP-212ENST00000613856 FBXW7Q969H0 707 aa13.69□□□□□ -0.22
SLIRP-212ENST00000613856 CLMNQ96JQ2 1002 aa13.69□□□□□ -0.22
SLIRP-212ENST00000613856 SEC62Q99442 399 aaKnown RBP13.69□□□□□ -0.22
SLIRP-212ENST00000613856 CFHR5Q9BXR6 569 aa13.69□□□□□ -0.22
SLIRP-212ENST00000613856 RBM19Q9Y4C8 960 aaKnown RBP13.69□□□□□ -0.22
SLIRP-212ENST00000613856 CDK5RAP2Q96SN8 1893 aa13.69□□□□□ -0.22
SLIRP-212ENST00000613856 FOCADQ5VW36 1801 aa13.69□□□□□ -0.22
SLIRP-212ENST00000613856 GPAA1O43292 621 aa13.68□□□□□ -0.22
SLIRP-212ENST00000613856 MCCP23508 829 aa13.68□□□□□ -0.22
SLIRP-212ENST00000613856 GTF2IP78347 998 aa13.68□□□□□ -0.22
SLIRP-212ENST00000613856 MECOMQ03112 1051 aa13.68□□□□□ -0.22
SLIRP-212ENST00000613856 MFSD14BQ5SR56 506 aa13.68□□□□□ -0.22
SLIRP-212ENST00000613856 LDLRAD1Q5T700 205 aa13.68□□□□□ -0.22
SLIRP-212ENST00000613856 NAA16Q6N069 864 aaPredicted RBP13.68□□□□□ -0.22
SLIRP-212ENST00000613856 CCDC129Q6ZRS4 1044 aa13.68□□□□□ -0.22
SLIRP-212ENST00000613856 DZIP1Q86YF9 867 aaKnown RBP13.68□□□□□ -0.22
SLIRP-212ENST00000613856 ZNF384Q8TF68 577 aa13.68□□□□□ -0.22
SLIRP-212ENST00000613856 IL17RAQ96F46 866 aa13.68□□□□□ -0.22
SLIRP-212ENST00000613856 DSCC1Q9BVC3 393 aa13.68□□□□□ -0.22
SLIRP-212ENST00000613856 PUS7LQ9H0K6 701 aaKnown RBP13.68□□□□□ -0.22
SLIRP-212ENST00000613856 ANGEL1Q9UNK9 670 aaKnown RBP13.68□□□□□ -0.22
SLIRP-212ENST00000613856 JAG2Q9Y219 1238 aa13.68□□□□□ -0.22
SLIRP-212ENST00000613856 ECM29Q5VYK3 1845 aa13.68□□□□□ -0.22
SLIRP-212ENST00000613856 CYP7A1P22680 504 aa13.67□□□□□ -0.22
SLIRP-212ENST00000613856 HSPA4P34932 840 aa13.67□□□□□ -0.22
SLIRP-212ENST00000613856 GSTO1P78417 241 aa13.67□□□□□ -0.22
SLIRP-212ENST00000613856 PTH1RQ03431 593 aa13.67□□□□□ -0.22
SLIRP-212ENST00000613856 SREBF2Q12772 1141 aa13.67□□□□□ -0.22
SLIRP-212ENST00000613856 TTLL5Q6EMB2 1281 aa13.67□□□□□ -0.22
SLIRP-212ENST00000613856 IFNL1Q8IU54 200 aa13.67□□□□□ -0.22
SLIRP-212ENST00000613856 CD99L2Q8TCZ2 262 aa13.67□□□□□ -0.22
SLIRP-212ENST00000613856 MAP4K1Q92918 833 aa13.67□□□□□ -0.22
SLIRP-212ENST00000613856 RPAP1Q9BWH6 1393 aaPredicted RBP13.67□□□□□ -0.22
SLIRP-212ENST00000613856 ZMYM6O95789 1325 aa13.66□□□□□ -0.22
SLIRP-212ENST00000613856 GJA5P36382 358 aa13.66□□□□□ -0.22
SLIRP-212ENST00000613856 ANAPC15P60006 121 aa13.66□□□□□ -0.22
SLIRP-212ENST00000613856 ADGRA1Q86SQ6 560 aa13.66□□□□□ -0.22
SLIRP-212ENST00000613856 CERS3Q8IU89 383 aa13.66□□□□□ -0.22
SLIRP-212ENST00000613856 KIAA0825Q8IV33 1275 aa13.66□□□□□ -0.22
SLIRP-212ENST00000613856 SLF2Q8IX21 1173 aa13.66□□□□□ -0.22
SLIRP-212ENST00000613856 CERS5Q8N5B7 392 aa13.66□□□□□ -0.22
SLIRP-212ENST00000613856 COLQQ9Y215 455 aaPredicted RBP13.66□□□□□ -0.22
SLIRP-212ENST00000613856 MROH7-TTC4A0A0A0MT08 1334 aa13.65□□□□□ -0.22
SLIRP-212ENST00000613856 GAKO14976 1311 aa13.65□□□□□ -0.22
SLIRP-212ENST00000613856 MYO3BQ8WXR4 1341 aa13.65□□□□□ -0.22
SLIRP-212ENST00000613856 NAV1Q8NEY1 1877 aa13.65□□□□□ -0.22
SLIRP-212ENST00000613856 DDX60LQ5H9U9 1706 aaKnown RBP13.65□□□□□ -0.22
SLIRP-212ENST00000613856 MBD4O95243 580 aa13.65□□□□□ -0.22
SLIRP-212ENST00000613856 LDHCP07864 332 aa13.65□□□□□ -0.22
SLIRP-212ENST00000613856 HSPD1P10809 573 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms