RNA–Protein interactions for RNA: ENST00000612455.1

CCND3-222, Transcript of cyclin D3, humanhuman

Gene CCND3, Length 536 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-222ENST00000612455 DDTLA6NHG4 134 aaPredicted RBP20.36■□□□□ 0.85
CCND3-222ENST00000612455 BAG3O95817 575 aa20.36■□□□□ 0.85
CCND3-222ENST00000612455 VGLL4Q14135 290 aa20.36■□□□□ 0.85
CCND3-222ENST00000612455 MANSC4A6NHS7 340 aaPredicted RBP20.35■□□□□ 0.85
CCND3-222ENST00000612455 TRPA1O75762 1119 aa20.35■□□□□ 0.85
CCND3-222ENST00000612455 MKRN3Q13064 507 aaKnown RBP20.35■□□□□ 0.85
CCND3-222ENST00000612455 TTF1Q15361 905 aaPredicted RBP20.35■□□□□ 0.85
CCND3-222ENST00000612455 SH3RF3Q8TEJ3 882 aaPredicted RBP20.35■□□□□ 0.85
CCND3-222ENST00000612455 ELP3Q9H9T3 547 aa20.35■□□□□ 0.85
CCND3-222ENST00000612455 TSKSQ9UJT2 592 aa20.35■□□□□ 0.85
CCND3-222ENST00000612455 IDH1O75874 414 aaKnown RBP20.34■□□□□ 0.85
CCND3-222ENST00000612455 PLCG2P16885 1265 aa20.34■□□□□ 0.85
CCND3-222ENST00000612455 CYP7A1P22680 504 aa20.34■□□□□ 0.85
CCND3-222ENST00000612455 SREBF2Q12772 1141 aa20.34■□□□□ 0.85
CCND3-222ENST00000612455 MAP3K12Q12852 859 aa20.34■□□□□ 0.85
CCND3-222ENST00000612455 WRNIP1Q96S55 665 aa20.34■□□□□ 0.85
CCND3-222ENST00000612455 AATFQ9NY61 560 aaKnown RBP eCLIP20.34■□□□□ 0.85
CCND3-222ENST00000612455 CSADQ9Y600 493 aa20.34■□□□□ 0.85
CCND3-222ENST00000612455 SNCAIPQ9Y6H5 919 aa20.34■□□□□ 0.85
CCND3-222ENST00000612455 CDK5RAP2Q96SN8 1893 aa20.33■□□□□ 0.85
CCND3-222ENST00000612455 COL2A1P02458 1487 aaPredicted RBP20.33■□□□□ 0.85
CCND3-222ENST00000612455 TESPA1A2RU30 521 aaPredicted RBP20.33■□□□□ 0.85
CCND3-222ENST00000612455 PHF20L1A8MW92 1017 aa20.33■□□□□ 0.85
CCND3-222ENST00000612455 TBC1D12O60347 775 aa20.33■□□□□ 0.85
CCND3-222ENST00000612455 PICALMQ13492 652 aa20.33■□□□□ 0.85
CCND3-222ENST00000612455 TEX11Q8IYF3 940 aa20.33■□□□□ 0.85
CCND3-222ENST00000612455 ZKSCAN4Q969J2 545 aaPredicted RBP20.33■□□□□ 0.85
CCND3-222ENST00000612455 OPTNQ96CV9 577 aa20.33■□□□□ 0.85
CCND3-222ENST00000612455 MS4A4AQ96JQ5 239 aa20.33■□□□□ 0.85
CCND3-222ENST00000612455 HAUS7Q99871 368 aa20.33■□□□□ 0.85
CCND3-222ENST00000612455 NOL10Q9BSC4 688 aaKnown RBP20.33■□□□□ 0.85
CCND3-222ENST00000612455 CASP8AP2Q9UKL3 1982 aa20.32■□□□□ 0.84
CCND3-222ENST00000612455 SPDYE5A6NIY4 337 aa20.32■□□□□ 0.84
CCND3-222ENST00000612455 INPP5BP32019 993 aa20.32■□□□□ 0.84
CCND3-222ENST00000612455 ERO1BQ86YB8 467 aa20.32■□□□□ 0.84
CCND3-222ENST00000612455 MAGEB6Q8N7X4 407 aa20.32■□□□□ 0.84
CCND3-222ENST00000612455 CNKSR2Q8WXI2 1034 aa20.32■□□□□ 0.84
CCND3-222ENST00000612455 CFHR5Q9BXR6 569 aa20.32■□□□□ 0.84
CCND3-222ENST00000612455 OSBPL5Q9H0X9 879 aaPredicted RBP20.32■□□□□ 0.84
CCND3-222ENST00000612455 BOLA2Q9H3K6 86 aa20.32■□□□□ 0.84
CCND3-222ENST00000612455 FOCADQ5VW36 1801 aa20.32■□□□□ 0.84
CCND3-222ENST00000612455 HDAC1Q13547 482 aaPredicted RBP20.31■□□□□ 0.84
CCND3-222ENST00000612455 NOL9Q5SY16 702 aaKnown RBP20.31■□□□□ 0.84
CCND3-222ENST00000612455 CERS3Q8IU89 383 aa20.31■□□□□ 0.84
CCND3-222ENST00000612455 ZSCAN29Q8IWY8 852 aaPredicted RBP20.31■□□□□ 0.84
CCND3-222ENST00000612455 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.31■□□□□ 0.84
CCND3-222ENST00000612455 SUPT16HQ9Y5B9 1047 aaKnown RBP20.31■□□□□ 0.84
CCND3-222ENST00000612455 GOLIM4O00461 696 aa20.3■□□□□ 0.84
CCND3-222ENST00000612455 DYNLL1P63167 89 aaKnown RBP20.3■□□□□ 0.84
CCND3-222ENST00000612455 IFNL1Q8IU54 200 aa20.3■□□□□ 0.84
CCND3-222ENST00000612455 EDC3Q96F86 508 aaKnown RBP20.3■□□□□ 0.84
CCND3-222ENST00000612455 DNAJC2Q99543 621 aaKnown RBP20.3■□□□□ 0.84
CCND3-222ENST00000612455 BCL11AQ9H165 835 aa20.3■□□□□ 0.84
CCND3-222ENST00000612455 ECHDC1Q9NTX5 307 aa20.3■□□□□ 0.84
CCND3-222ENST00000612455 PAG1Q9NWQ8 432 aa20.3■□□□□ 0.84
CCND3-222ENST00000612455 TCRBV5S4A2TA0A5A2 114 aa20.29■□□□□ 0.84
CCND3-222ENST00000612455 ALDH1A1P00352 501 aa20.29■□□□□ 0.84
CCND3-222ENST00000612455 PPATQ06203 517 aa20.29■□□□□ 0.84
CCND3-222ENST00000612455 SLC9C2Q5TAH2 1124 aa20.29■□□□□ 0.84
CCND3-222ENST00000612455 TGFBRAP1Q8WUH2 860 aa20.29■□□□□ 0.84
CCND3-222ENST00000612455 PTPN18Q99952 460 aa20.29■□□□□ 0.84
CCND3-222ENST00000612455 DHX36Q9H2U1 1008 aaKnown RBP20.29■□□□□ 0.84
CCND3-222ENST00000612455 IGF2BP3O00425 579 aaKnown RBP eCLIP20.28■□□□□ 0.84
CCND3-222ENST00000612455 SLURP2P0DP57 97 aa20.28■□□□□ 0.84
CCND3-222ENST00000612455 PDE6AP16499 860 aa20.28■□□□□ 0.84
CCND3-222ENST00000612455 GTF2A2P52657 109 aa20.28■□□□□ 0.84
CCND3-222ENST00000612455 PPIL2Q13356 520 aa20.28■□□□□ 0.84
CCND3-222ENST00000612455 NOM1Q5C9Z4 860 aaKnown RBP20.28■□□□□ 0.84
CCND3-222ENST00000612455 METTL16Q86W50 562 aaKnown RBP20.28■□□□□ 0.84
CCND3-222ENST00000612455 OTUD5Q96G74 571 aa20.28■□□□□ 0.84
CCND3-222ENST00000612455 RIOK1Q9BRS2 568 aaKnown RBP20.28■□□□□ 0.84
CCND3-222ENST00000612455 TNS4Q8IZW8 715 aa20.27■□□□□ 0.84
CCND3-222ENST00000612455 MIGA1Q8NAN2 632 aa20.27■□□□□ 0.84
CCND3-222ENST00000612455 EXOC6Q8TAG9 804 aa20.27■□□□□ 0.84
CCND3-222ENST00000612455 GCC1Q96CN9 775 aa20.27■□□□□ 0.84
CCND3-222ENST00000612455 FLT1P17948 1338 aa20.27■□□□□ 0.83
CCND3-222ENST00000612455 IRF6O14896 467 aa20.26■□□□□ 0.83
CCND3-222ENST00000612455 CTNND1O60716 968 aaKnown RBP20.26■□□□□ 0.83
CCND3-222ENST00000612455 TBC1D8O95759 1140 aa20.26■□□□□ 0.83
CCND3-222ENST00000612455 FOXP4Q8IVH2 680 aaPredicted RBP20.26■□□□□ 0.83
CCND3-222ENST00000612455 MAPKAPK5Q8IW41 473 aa20.26■□□□□ 0.83
CCND3-222ENST00000612455 BRI3BPQ8WY22 251 aa20.26■□□□□ 0.83
CCND3-222ENST00000612455 PI4KBQ9UBF8 816 aa20.26■□□□□ 0.83
CCND3-222ENST00000612455 KCNH4Q9UQ05 1017 aa20.26■□□□□ 0.83
CCND3-222ENST00000612455 ZNF532Q9HCE3 1301 aa20.26■□□□□ 0.83
CCND3-222ENST00000612455 SIPA1L1O43166 1804 aa20.25■□□□□ 0.83
CCND3-222ENST00000612455 ADD2P35612 726 aa20.25■□□□□ 0.83
CCND3-222ENST00000612455 OTUD7BQ6GQQ9 843 aa20.25■□□□□ 0.83
CCND3-222ENST00000612455 SCYL3Q8IZE3 742 aa20.25■□□□□ 0.83
CCND3-222ENST00000612455 R3HDMLQ9H3Y0 253 aa20.25■□□□□ 0.83
CCND3-222ENST00000612455 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.25■□□□□ 0.83
CCND3-222ENST00000612455 HERC5Q9UII4 1024 aaKnown RBP20.25■□□□□ 0.83
CCND3-222ENST00000612455 MYH1P12882 1939 aa20.24■□□□□ 0.83
CCND3-222ENST00000612455 MYH7P12883 1935 aa20.24■□□□□ 0.83
CCND3-222ENST00000612455 MAGEB6P1A0A0J9YX57 407 aa20.24■□□□□ 0.83
CCND3-222ENST00000612455 UBE3CQ15386 1083 aa20.24■□□□□ 0.83
CCND3-222ENST00000612455 GPATCH3Q96I76 525 aa20.24■□□□□ 0.83
CCND3-222ENST00000612455 TTC41PQ6P2S7 1318 aa20.24■□□□□ 0.83
CCND3-222ENST00000612455 SALL3Q9BXA9 1300 aa20.24■□□□□ 0.83
CCND3-222ENST00000612455 CCL15-CCL14A0A0B4J2E2 113 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms