RNA–Protein interactions for RNA: ENST00000611947.1

U3.50-201, humanhuman

BASIC

Gene U3, Length 228 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U3.50-201ENST00000611947 RAI14Q9P0K7 980 aa11.32□□□□□ -0.6
U3.50-201ENST00000611947 HMG20BQ9P0W2 317 aa11.32□□□□□ -0.6
U3.50-201ENST00000611947 LRP2BPQ9P2M1 347 aa11.32□□□□□ -0.6
U3.50-201ENST00000611947 PNMA6EA0A0J9YXQ4 647 aa11.31□□□□□ -0.6
U3.50-201ENST00000611947 PDHXO00330 501 aa11.31□□□□□ -0.6
U3.50-201ENST00000611947 CTNND1O60716 968 aaKnown RBP11.31□□□□□ -0.6
U3.50-201ENST00000611947 IGSF3O75054 1194 aa11.31□□□□□ -0.6
U3.50-201ENST00000611947 HOXD10P28358 340 aa11.31□□□□□ -0.6
U3.50-201ENST00000611947 ARID4AP29374 1257 aaPredicted RBP11.31□□□□□ -0.6
U3.50-201ENST00000611947 LACTBP83111 547 aaPredicted RBP11.31□□□□□ -0.6
U3.50-201ENST00000611947 ATP8B2P98198 1209 aa11.31□□□□□ -0.6
U3.50-201ENST00000611947 MAP3K10Q02779 954 aa11.31□□□□□ -0.6
U3.50-201ENST00000611947 PICALMQ13492 652 aa11.31□□□□□ -0.6
U3.50-201ENST00000611947 SLC9C1Q4G0N8 1177 aa11.31□□□□□ -0.6
U3.50-201ENST00000611947 PRPF38BQ5VTL8 546 aaKnown RBP11.31□□□□□ -0.6
U3.50-201ENST00000611947 ZFPM1Q8IX07 1006 aa11.31□□□□□ -0.6
U3.50-201ENST00000611947 SCYL3Q8IZE3 742 aa11.31□□□□□ -0.6
U3.50-201ENST00000611947 ZHX2Q9Y6X8 837 aa11.31□□□□□ -0.6
U3.50-201ENST00000611947 KIAA0100Q14667 2235 aaKnown RBP11.3□□□□□ -0.6
U3.50-201ENST00000611947 PHF20L1A8MW92 1017 aa11.3□□□□□ -0.6
U3.50-201ENST00000611947 TBC1D12O60347 775 aa11.3□□□□□ -0.6
U3.50-201ENST00000611947 SURF6O75683 361 aaKnown RBP11.3□□□□□ -0.6
U3.50-201ENST00000611947 BAG3O95817 575 aa11.3□□□□□ -0.6
U3.50-201ENST00000611947 TTC39AQ5SRH9 613 aa11.3□□□□□ -0.6
U3.50-201ENST00000611947 C17orf99Q6UX52 265 aa11.3□□□□□ -0.6
U3.50-201ENST00000611947 ITPRIPQ8IWB1 547 aa11.3□□□□□ -0.6
U3.50-201ENST00000611947 MIER1Q8N108 512 aa11.3□□□□□ -0.6
U3.50-201ENST00000611947 SSH3Q8TE77 659 aa11.3□□□□□ -0.6
U3.50-201ENST00000611947 NSUN4Q96CB9 384 aaKnown RBP11.3□□□□□ -0.6
U3.50-201ENST00000611947 PARK7Q99497 189 aaKnown RBP11.3□□□□□ -0.6
U3.50-201ENST00000611947 TNNQ9UQP3 1299 aa11.3□□□□□ -0.6
U3.50-201ENST00000611947 DDTLA6NHG4 134 aaPredicted RBP11.29□□□□□ -0.6
U3.50-201ENST00000611947 FMNL1O95466 1100 aaPredicted RBP11.29□□□□□ -0.6
U3.50-201ENST00000611947 MS4A1P11836 297 aa11.29□□□□□ -0.6
U3.50-201ENST00000611947 PLCG2P16885 1265 aa11.29□□□□□ -0.6
U3.50-201ENST00000611947 PTPRAP18433 802 aa11.29□□□□□ -0.6
U3.50-201ENST00000611947 POLA2Q14181 598 aa11.29□□□□□ -0.6
U3.50-201ENST00000611947 TNNI3KQ59H18 835 aa11.29□□□□□ -0.6
U3.50-201ENST00000611947 TBC1D9Q6ZT07 1266 aa11.29□□□□□ -0.6
U3.50-201ENST00000611947 CPA4Q9UI42 421 aa11.29□□□□□ -0.6
U3.50-201ENST00000611947 PTCH2Q9Y6C5 1203 aa11.29□□□□□ -0.6
U3.50-201ENST00000611947 FPGT-TNNI3KV9GXZ4 949 aa11.29□□□□□ -0.6
U3.50-201ENST00000611947 DOCK2Q92608 1830 aa11.28□□□□□ -0.6
U3.50-201ENST00000611947 ZBTB7BO15156 539 aaPredicted RBP11.28□□□□□ -0.6
U3.50-201ENST00000611947 MCAMP43121 646 aa11.28□□□□□ -0.6
U3.50-201ENST00000611947 PSMC4P43686 418 aa11.28□□□□□ -0.6
U3.50-201ENST00000611947 RHBDL3P58872 404 aa11.28□□□□□ -0.6
U3.50-201ENST00000611947 SLC4A8Q2Y0W8 1093 aa11.28□□□□□ -0.6
U3.50-201ENST00000611947 NAA16Q6N069 864 aaPredicted RBP11.28□□□□□ -0.6
U3.50-201ENST00000611947 SH3BP5LQ7L8J4 393 aa11.28□□□□□ -0.6
U3.50-201ENST00000611947 ZNF333Q96JL9 665 aa11.28□□□□□ -0.6
U3.50-201ENST00000611947 ZNF512BQ96KM6 892 aaPredicted RBP11.28□□□□□ -0.6
U3.50-201ENST00000611947 TBC1D2Q9BYX2 928 aa11.28□□□□□ -0.6
U3.50-201ENST00000611947 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.28□□□□□ -0.6
U3.50-201ENST00000611947 DDX4Q9NQI0 724 aaKnown RBP11.28□□□□□ -0.6
U3.50-201ENST00000611947 SLC45A1Q9Y2W3 748 aa11.28□□□□□ -0.6
U3.50-201ENST00000611947 AFG3L2Q9Y4W6 797 aa11.28□□□□□ -0.6
U3.50-201ENST00000611947 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.28□□□□□ -0.6
U3.50-201ENST00000611947 RFX7Q2KHR2 1363 aa11.28□□□□□ -0.6
U3.50-201ENST00000611947 ATRNL1Q5VV63 1379 aa11.28□□□□□ -0.6
U3.50-201ENST00000611947 CENPFP49454 3210 aa11.27□□□□□ -0.61
U3.50-201ENST00000611947 A0A0G2JLL6 359 aaPredicted RBP11.27□□□□□ -0.61
U3.50-201ENST00000611947 POTEFA5A3E0 1075 aa11.27□□□□□ -0.61
U3.50-201ENST00000611947 FCGRTP55899 365 aa11.27□□□□□ -0.61
U3.50-201ENST00000611947 PI16Q6UXB8 463 aa11.27□□□□□ -0.61
U3.50-201ENST00000611947 GADL1Q6ZQY3 521 aa11.27□□□□□ -0.61
U3.50-201ENST00000611947 PRRT2Q7Z6L0 340 aaPredicted RBP11.27□□□□□ -0.61
U3.50-201ENST00000611947 ERC1Q8IUD2 1116 aa11.27□□□□□ -0.61
U3.50-201ENST00000611947 TEX11Q8IYF3 940 aa11.27□□□□□ -0.61
U3.50-201ENST00000611947 RAET1EQ8TD07 263 aa11.27□□□□□ -0.61
U3.50-201ENST00000611947 OSBPL5Q9H0X9 879 aaPredicted RBP11.27□□□□□ -0.61
U3.50-201ENST00000611947 DHX36Q9H2U1 1008 aaKnown RBP11.27□□□□□ -0.61
U3.50-201ENST00000611947 PI4KBQ9UBF8 816 aa11.27□□□□□ -0.61
U3.50-201ENST00000611947 SRRDQ9UH36 339 aa11.27□□□□□ -0.61
U3.50-201ENST00000611947 HERC5Q9UII4 1024 aaKnown RBP11.27□□□□□ -0.61
U3.50-201ENST00000611947 NOP58Q9Y2X3 529 aaKnown RBP11.27□□□□□ -0.61
U3.50-201ENST00000611947 HTTP42858 3142 aa11.26□□□□□ -0.61
U3.50-201ENST00000611947 SLC34A2O95436 690 aa11.26□□□□□ -0.61
U3.50-201ENST00000611947 PPP4CP60510 307 aa11.26□□□□□ -0.61
U3.50-201ENST00000611947 CAP1Q01518 475 aa11.26□□□□□ -0.61
U3.50-201ENST00000611947 MOGSQ13724 837 aa11.26□□□□□ -0.61
U3.50-201ENST00000611947 HSP90AB4PQ58FF6 505 aa11.26□□□□□ -0.61
U3.50-201ENST00000611947 GPAT2Q6NUI2 795 aa11.26□□□□□ -0.61
U3.50-201ENST00000611947 CERS3Q8IU89 383 aa11.26□□□□□ -0.61
U3.50-201ENST00000611947 SMCR8Q8TEV9 937 aaPredicted RBP11.26□□□□□ -0.61
U3.50-201ENST00000611947 ZNF384Q8TF68 577 aa11.26□□□□□ -0.61
U3.50-201ENST00000611947 GCC1Q96CN9 775 aa11.26□□□□□ -0.61
U3.50-201ENST00000611947 TRIM47Q96LD4 638 aa11.26□□□□□ -0.61
U3.50-201ENST00000611947 DBNDD2Q9BQY9 259 aa11.26□□□□□ -0.61
U3.50-201ENST00000611947 TRIM34Q9BYJ4 488 aa11.26□□□□□ -0.61
U3.50-201ENST00000611947 ARHGAP39Q9C0H5 1083 aa11.26□□□□□ -0.61
U3.50-201ENST00000611947 C1orf115Q9H7X2 142 aa11.26□□□□□ -0.61
U3.50-201ENST00000611947 SNRKQ9NRH2 765 aa11.26□□□□□ -0.61
U3.50-201ENST00000611947 PNMA3Q9UL41 463 aa11.26□□□□□ -0.61
U3.50-201ENST00000611947 ZBED9Q6R2W3 1325 aa11.26□□□□□ -0.61
U3.50-201ENST00000611947 COL2A1P02458 1487 aaPredicted RBP11.25□□□□□ -0.61
U3.50-201ENST00000611947 TRIM75PA6NK02 468 aa11.25□□□□□ -0.61
U3.50-201ENST00000611947 CYP2C8P10632 490 aa11.25□□□□□ -0.61
U3.50-201ENST00000611947 EN2P19622 333 aaPredicted RBP11.25□□□□□ -0.61
U3.50-201ENST00000611947 PABPC4Q13310 644 aaKnown RBP eCLIP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms