RNA–Protein interactions for RNA: ENST00000610733.1

TPM1-233, Transcript of tropomyosin 1, human

TSL 2 BASIC

Gene TPM1, Length 3,957 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-233	ENST00000610733	TFRC	P02786	760 aa	Known RBP	10.91	□□□□□ -0.66
TPM1-233	ENST00000610733	CCDC175	P0C221	793 aa		10.91	□□□□□ -0.66
TPM1-233	ENST00000610733	CCDC181	Q5TID7	509 aa		10.91	□□□□□ -0.66
TPM1-233	ENST00000610733	LLPH	Q9BRT6	129 aa	Known RBP	10.91	□□□□□ -0.66
TPM1-233	ENST00000610733	TSPYL1	Q9H0U9	437 aa		10.91	□□□□□ -0.66
TPM1-233	ENST00000610733	IGHMBP2	P38935	993 aa	Known RBP	10.91	□□□□□ -0.66
TPM1-233	ENST00000610733	CCDC178	Q5BJE1	867 aa		10.91	□□□□□ -0.66
TPM1-233	ENST00000610733	E4F1	Q66K89	784 aa	Predicted RBP	10.91	□□□□□ -0.66
TPM1-233	ENST00000610733	TTC19	Q6DKK2	380 aa	Predicted RBP	10.91	□□□□□ -0.66
TPM1-233	ENST00000610733	BRAP	Q7Z569	592 aa		10.91	□□□□□ -0.66
TPM1-233	ENST00000610733	ARHGEF25	Q86VW2	580 aa		10.91	□□□□□ -0.66
TPM1-233	ENST00000610733	ZNHIT6	Q9NWK9	470 aa	Known RBP	10.91	□□□□□ -0.66
TPM1-233	ENST00000610733	ASAP1	Q9ULH1	1129 aa		10.91	□□□□□ -0.66
TPM1-233	ENST00000610733	ZNF609	O15014	1411 aa		10.9	□□□□□ -0.66
TPM1-233	ENST00000610733	TRIM75P	A6NK02	468 aa		10.9	□□□□□ -0.66
TPM1-233	ENST00000610733	SMC1A	Q14683	1233 aa	Known RBP	10.9	□□□□□ -0.66
TPM1-233	ENST00000610733	FAM47A	Q5JRC9	791 aa		10.9	□□□□□ -0.66
TPM1-233	ENST00000610733	TRIM47	Q96LD4	638 aa		10.9	□□□□□ -0.66
TPM1-233	ENST00000610733	CRACR2A	Q9BSW2	395 aa		10.9	□□□□□ -0.66
TPM1-233	ENST00000610733	POLD4	Q9HCU8	107 aa		10.9	□□□□□ -0.66
TPM1-233	ENST00000610733	TSPY2	A6NKD2	308 aa		10.9	□□□□□ -0.66
TPM1-233	ENST00000610733	CYP27B1	O15528	508 aa		10.9	□□□□□ -0.66
TPM1-233	ENST00000610733	TRIM21	P19474	475 aa	Known RBP	10.9	□□□□□ -0.66
TPM1-233	ENST00000610733	KIF23	Q02241	960 aa	Predicted RBP	10.9	□□□□□ -0.66
TPM1-233	ENST00000610733	UBXN1	Q04323	297 aa		10.9	□□□□□ -0.66
TPM1-233	ENST00000610733	POSTN	Q15063	836 aa		10.9	□□□□□ -0.66
TPM1-233	ENST00000610733	ZMYM1	Q5SVZ6	1142 aa		10.9	□□□□□ -0.66
TPM1-233	ENST00000610733	PIK3AP1	Q6ZUJ8	805 aa		10.9	□□□□□ -0.66
TPM1-233	ENST00000610733	TOGARAM2	Q6ZUX3	1019 aa		10.9	□□□□□ -0.66
TPM1-233	ENST00000610733	RGS22	Q8NE09	1264 aa		10.9	□□□□□ -0.66
TPM1-233	ENST00000610733	CTCFL	Q8NI51	663 aa	Predicted RBP	10.9	□□□□□ -0.66
TPM1-233	ENST00000610733	SIRT1	Q96EB6	747 aa		10.9	□□□□□ -0.66
TPM1-233	ENST00000610733	DDX41	Q9UJV9	622 aa	Known RBP	10.9	□□□□□ -0.66
TPM1-233	ENST00000610733	ATP2C2	O75185	946 aa		10.9	□□□□□ -0.67
TPM1-233	ENST00000610733	BCAM	P50895	628 aa		10.9	□□□□□ -0.67
TPM1-233	ENST00000610733	CCDC70	Q6NSX1	233 aa		10.9	□□□□□ -0.67
TPM1-233	ENST00000610733	USP49	Q70CQ1	688 aa		10.9	□□□□□ -0.67
TPM1-233	ENST00000610733	FMR1NB	Q8N0W7	255 aa	Predicted RBP	10.9	□□□□□ -0.67
TPM1-233	ENST00000610733	CDC5L	Q99459	802 aa	Known RBP	10.9	□□□□□ -0.67
TPM1-233	ENST00000610733	CWC15	Q9P013	229 aa	Known RBP	10.9	□□□□□ -0.67
TPM1-233	ENST00000610733	ADGRB2	O60241	1585 aa		10.9	□□□□□ -0.67
TPM1-233	ENST00000610733	MTIF2	P46199	727 aa	Known RBP	10.89	□□□□□ -0.67
TPM1-233	ENST00000610733	CHMP4BP1	P59074	171 aa		10.89	□□□□□ -0.67
TPM1-233	ENST00000610733	CCZ1B	P86790	482 aa		10.89	□□□□□ -0.67
TPM1-233	ENST00000610733	CCZ1	P86791	482 aa	Predicted RBP	10.89	□□□□□ -0.67
TPM1-233	ENST00000610733	GRIN1	Q05586	938 aa		10.89	□□□□□ -0.67
TPM1-233	ENST00000610733	IFIT1B	Q5T764	474 aa	Known RBP	10.89	□□□□□ -0.67
TPM1-233	ENST00000610733	GOLGA1	Q92805	767 aa		10.89	□□□□□ -0.67
TPM1-233	ENST00000610733	EPSTI1	Q96J88	318 aa		10.89	□□□□□ -0.67
TPM1-233	ENST00000610733	WDR24	Q96S15	920 aa		10.89	□□□□□ -0.67
TPM1-233	ENST00000610733	INO80	Q9ULG1	1556 aa	Predicted RBP	10.89	□□□□□ -0.67
TPM1-233	ENST00000610733	PIK3C2B	O00750	1634 aa		10.89	□□□□□ -0.67
TPM1-233	ENST00000610733	EIF3J	O75822	258 aa	Known RBP	10.89	□□□□□ -0.67
TPM1-233	ENST00000610733	TDRD12	Q587J7	1177 aa	Known RBP	10.89	□□□□□ -0.67
TPM1-233	ENST00000610733	SMIM5	Q71RC9	77 aa		10.89	□□□□□ -0.67
TPM1-233	ENST00000610733	IQCA1	Q86XH1	822 aa		10.89	□□□□□ -0.67
TPM1-233	ENST00000610733	ACRBP	Q8NEB7	543 aa		10.89	□□□□□ -0.67
TPM1-233	ENST00000610733	DSCC1	Q9BVC3	393 aa		10.89	□□□□□ -0.67
TPM1-233	ENST00000610733	PCDHB6	Q9Y5E3	794 aa		10.89	□□□□□ -0.67
TPM1-233	ENST00000610733	AKR1B15	C9JRZ8	316 aa	Predicted RBP	10.89	□□□□□ -0.67
TPM1-233	ENST00000610733	SLC5A1	P13866	664 aa		10.89	□□□□□ -0.67
TPM1-233	ENST00000610733	CDC27	P30260	824 aa		10.89	□□□□□ -0.67
TPM1-233	ENST00000610733	GUCY1A2	P33402	732 aa		10.89	□□□□□ -0.67
TPM1-233	ENST00000610733	TERF2	Q15554	542 aa		10.89	□□□□□ -0.67
TPM1-233	ENST00000610733	APOA5	Q6Q788	366 aa		10.89	□□□□□ -0.67
TPM1-233	ENST00000610733	CATIP	Q7Z7H3	387 aa		10.89	□□□□□ -0.67
TPM1-233	ENST00000610733	ANKRD13C	Q8N6S4	541 aa		10.89	□□□□□ -0.67
TPM1-233	ENST00000610733	RASGRP4	Q8TDF6	673 aa		10.89	□□□□□ -0.67
TPM1-233	ENST00000610733	WASF1	Q92558	559 aa		10.89	□□□□□ -0.67
TPM1-233	ENST00000610733	CDK5RAP3	Q96JB5	506 aa		10.89	□□□□□ -0.67
TPM1-233	ENST00000610733	FAM205C	A6NFA0	338 aa		10.88	□□□□□ -0.67
TPM1-233	ENST00000610733	PRR29	P0C7W0	189 aa		10.88	□□□□□ -0.67
TPM1-233	ENST00000610733	PNMA6A	P0CW24	399 aa	Predicted RBP	10.88	□□□□□ -0.67
TPM1-233	ENST00000610733	FDPS	P14324	419 aa	Known RBP	10.88	□□□□□ -0.67
TPM1-233	ENST00000610733	CYB5R4	Q7L1T6	521 aa		10.88	□□□□□ -0.67
TPM1-233	ENST00000610733	ZNF274	Q96GC6	653 aa	Predicted RBP	10.88	□□□□□ -0.67
TPM1-233	ENST00000610733	MKNK2	Q9HBH9	465 aa		10.88	□□□□□ -0.67
TPM1-233	ENST00000610733	RTEL1	Q9NZ71	1219 aa		10.88	□□□□□ -0.67
TPM1-233	ENST00000610733	SRCAP	Q6ZRS2	3230 aa		10.88	□□□□□ -0.67
TPM1-233	ENST00000610733	CTAGE15	A4D2H0	777 aa		10.88	□□□□□ -0.67
TPM1-233	ENST00000610733	ZFY	P08048	801 aa	Predicted RBP	10.88	□□□□□ -0.67
TPM1-233	ENST00000610733	CTAGE8	P0CG41	777 aa		10.88	□□□□□ -0.67
TPM1-233	ENST00000610733	UBA7	P41226	1012 aa		10.88	□□□□□ -0.67
TPM1-233	ENST00000610733	CTAGE6	Q86UF2	777 aa		10.88	□□□□□ -0.67
TPM1-233	ENST00000610733	TBC1D10C	Q8IV04	446 aa		10.88	□□□□□ -0.67
TPM1-233	ENST00000610733	CTAGE4	Q8IX94	777 aa		10.88	□□□□□ -0.67
TPM1-233	ENST00000610733	PDE11A	Q9HCR9	933 aa		10.88	□□□□□ -0.67
TPM1-233	ENST00000610733	CTAGE9	A4FU28	777 aa		10.88	□□□□□ -0.67
TPM1-233	ENST00000610733	KRT9	P35527	623 aa		10.88	□□□□□ -0.67
TPM1-233	ENST00000610733	HNRNPH2	P55795	449 aa	Known RBP	10.88	□□□□□ -0.67
TPM1-233	ENST00000610733	IK	Q13123	557 aa	Predicted RBP	10.88	□□□□□ -0.67
TPM1-233	ENST00000610733	HEATR3	Q7Z4Q2	680 aa		10.88	□□□□□ -0.67
TPM1-233	ENST00000610733	SMARCC1	Q92922	1105 aa	Predicted RBP	10.88	□□□□□ -0.67
TPM1-233	ENST00000610733	SUGCT	Q9HAC7	445 aa		10.88	□□□□□ -0.67
TPM1-233	ENST00000610733	SEC31B	Q9NQW1	1179 aa		10.88	□□□□□ -0.67
TPM1-233	ENST00000610733	PDE6A	P16499	860 aa		10.87	□□□□□ -0.67
TPM1-233	ENST00000610733	EPS15	P42566	896 aa		10.87	□□□□□ -0.67
TPM1-233	ENST00000610733	RAD51AP2	Q09MP3	1159 aa		10.87	□□□□□ -0.67
TPM1-233	ENST00000610733	SPTY2D1	Q68D10	685 aa	Predicted RBP	10.87	□□□□□ -0.67
TPM1-233	ENST00000610733	SPECC1L	Q69YQ0	1117 aa		10.87	□□□□□ -0.67

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