RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 TOP1P11387 765 aaKnown RBP13.68□□□□□ -0.22
TP53-220ENST00000610623 TMEM139Q8IV31 216 aa13.68□□□□□ -0.22
TP53-220ENST00000610623 FSD1Q9BTV5 496 aa13.68□□□□□ -0.22
TP53-220ENST00000610623 MTMR7Q9Y216 660 aa13.68□□□□□ -0.22
TP53-220ENST00000610623 FARP1Q9Y4F1 1045 aaPredicted RBP13.68□□□□□ -0.22
TP53-220ENST00000610623 NEDD4P46934 1319 aa13.68□□□□□ -0.22
TP53-220ENST00000610623 MAP3K13O43283 966 aa13.68□□□□□ -0.22
TP53-220ENST00000610623 SERPINC1P01008 464 aa13.68□□□□□ -0.22
TP53-220ENST00000610623 TUBB2AQ13885 445 aa13.68□□□□□ -0.22
TP53-220ENST00000610623 CCDC91Q7Z6B0 441 aa13.68□□□□□ -0.22
TP53-220ENST00000610623 SRGAP1Q7Z6B7 1085 aa13.68□□□□□ -0.22
TP53-220ENST00000610623 FAM177A1Q8N128 213 aaPredicted RBP13.68□□□□□ -0.22
TP53-220ENST00000610623 FAM71BQ8TC56 605 aa13.68□□□□□ -0.22
TP53-220ENST00000610623 KCNG4Q8TDN1 519 aa13.68□□□□□ -0.22
TP53-220ENST00000610623 DRC1Q96MC2 740 aa13.68□□□□□ -0.22
TP53-220ENST00000610623 METTL22Q9BUU2 404 aaPredicted RBP13.68□□□□□ -0.22
TP53-220ENST00000610623 TUBB2BQ9BVA1 445 aa13.68□□□□□ -0.22
TP53-220ENST00000610623 L1RE1Q9UN81 338 aa13.68□□□□□ -0.22
TP53-220ENST00000610623 TUBBP07437 444 aa13.67□□□□□ -0.22
TP53-220ENST00000610623 HMGB1P09429 215 aaKnown RBP13.67□□□□□ -0.22
TP53-220ENST00000610623 IL2RBP14784 551 aa13.67□□□□□ -0.22
TP53-220ENST00000610623 CHMP4BP1P59074 171 aa13.67□□□□□ -0.22
TP53-220ENST00000610623 AIMP1Q12904 312 aaKnown RBP13.67□□□□□ -0.22
TP53-220ENST00000610623 MCM6Q14566 821 aa13.67□□□□□ -0.22
TP53-220ENST00000610623 CWF19L2Q2TBE0 894 aaKnown RBP13.67□□□□□ -0.22
TP53-220ENST00000610623 CFAP100Q494V2 611 aa13.67□□□□□ -0.22
TP53-220ENST00000610623 MSANTD4Q8NCY6 345 aa13.67□□□□□ -0.22
TP53-220ENST00000610623 XAGE3Q8WTP9 111 aa13.67□□□□□ -0.22
TP53-220ENST00000610623 CEP89Q96ST8 783 aa13.67□□□□□ -0.22
TP53-220ENST00000610623 FAM107BQ9H098 131 aa13.67□□□□□ -0.22
TP53-220ENST00000610623 HSD3B7Q9H2F3 369 aa13.67□□□□□ -0.22
TP53-220ENST00000610623 CLGNO14967 610 aa13.67□□□□□ -0.22
TP53-220ENST00000610623 MMS22LQ6ZRQ5 1243 aa13.67□□□□□ -0.22
TP53-220ENST00000610623 CEP112Q8N8E3 955 aa13.67□□□□□ -0.22
TP53-220ENST00000610623 BAG1Q99933 345 aaPredicted RBP13.67□□□□□ -0.22
TP53-220ENST00000610623 COL15A1P39059 1388 aa13.66□□□□□ -0.22
TP53-220ENST00000610623 PTPDC1A2A3K4 754 aa13.66□□□□□ -0.22
TP53-220ENST00000610623 YEATS4O95619 227 aa13.66□□□□□ -0.22
TP53-220ENST00000610623 ATP1A3P13637 1013 aa13.66□□□□□ -0.22
TP53-220ENST00000610623 MYL6BP14649 208 aa13.66□□□□□ -0.22
TP53-220ENST00000610623 MYL5Q02045 173 aa13.66□□□□□ -0.22
TP53-220ENST00000610623 SF3A1Q15459 793 aaKnown RBP13.66□□□□□ -0.22
TP53-220ENST00000610623 HSP90B2PQ58FF3 399 aa13.66□□□□□ -0.22
TP53-220ENST00000610623 LINC00301Q8NCQ3 95 aa13.66□□□□□ -0.22
TP53-220ENST00000610623 DHX58Q96C10 678 aa13.66□□□□□ -0.22
TP53-220ENST00000610623 GBP3Q9H0R5 595 aa13.66□□□□□ -0.22
TP53-220ENST00000610623 ACBD3Q9H3P7 528 aa13.66□□□□□ -0.22
TP53-220ENST00000610623 MED4Q9NPJ6 270 aa13.66□□□□□ -0.22
TP53-220ENST00000610623 NEURL1BA8MQ27 555 aa13.65□□□□□ -0.22
TP53-220ENST00000610623 PPFIA4O75335 1185 aa13.65□□□□□ -0.22
TP53-220ENST00000610623 MCTP2Q6DN12 878 aa13.65□□□□□ -0.22
TP53-220ENST00000610623 LRRC31Q6UY01 552 aa13.65□□□□□ -0.22
TP53-220ENST00000610623 ANKRD13DQ6ZTN6 518 aa13.65□□□□□ -0.22
TP53-220ENST00000610623 COPS6Q7L5N1 327 aa13.65□□□□□ -0.22
TP53-220ENST00000610623 LRP10Q7Z4F1 713 aa13.65□□□□□ -0.22
TP53-220ENST00000610623 ILDR1Q86SU0 546 aaPredicted RBP13.65□□□□□ -0.22
TP53-220ENST00000610623 ZNF589Q86UQ0 364 aaPredicted RBP13.65□□□□□ -0.22
TP53-220ENST00000610623 TOMM22Q9NS69 142 aa13.65□□□□□ -0.22
TP53-220ENST00000610623 FAN1Q9Y2M0 1017 aa13.65□□□□□ -0.22
TP53-220ENST00000610623 A0A087WUV0 522 aaPredicted RBP13.65□□□□□ -0.22
TP53-220ENST00000610623 DPYSL4O14531 572 aa13.65□□□□□ -0.22
TP53-220ENST00000610623 CUTAO60888 179 aa13.65□□□□□ -0.22
TP53-220ENST00000610623 ZNF202O95125 648 aa13.65□□□□□ -0.22
TP53-220ENST00000610623 CTDNEP1O95476 244 aa13.65□□□□□ -0.22
TP53-220ENST00000610623 IGKV5-2P06315 115 aa13.65□□□□□ -0.22
TP53-220ENST00000610623 GSCP56915 257 aaPredicted RBP13.65□□□□□ -0.22
TP53-220ENST00000610623 FOXR1Q6PIV2 292 aa13.65□□□□□ -0.22
TP53-220ENST00000610623 SUCLG2Q96I99 432 aa13.65□□□□□ -0.22
TP53-220ENST00000610623 ANKZF1Q9H8Y5 726 aa13.65□□□□□ -0.22
TP53-220ENST00000610623 POLR3EQ9NVU0 708 aa13.65□□□□□ -0.22
TP53-220ENST00000610623 AKAP2Q9Y2D5 859 aa13.65□□□□□ -0.22
TP53-220ENST00000610623 KCPQ6ZWJ8 1503 aa13.65□□□□□ -0.22
TP53-220ENST00000610623 COL14A1Q05707 1796 aaKnown RBP13.65□□□□□ -0.22
TP53-220ENST00000610623 SALL1Q9NSC2 1324 aa13.65□□□□□ -0.22
TP53-220ENST00000610623 BIN1O00499 593 aa13.64□□□□□ -0.23
TP53-220ENST00000610623 TBX2Q13207 712 aaPredicted RBP13.64□□□□□ -0.23
TP53-220ENST00000610623 GCKRQ14397 625 aa13.64□□□□□ -0.23
TP53-220ENST00000610623 STK38Q15208 465 aa13.64□□□□□ -0.23
TP53-220ENST00000610623 CCDC12Q8WUD4 166 aaPredicted RBP13.64□□□□□ -0.23
TP53-220ENST00000610623 DPF2Q92785 391 aa13.64□□□□□ -0.23
TP53-220ENST00000610623 NUP188Q5SRE5 1749 aa13.64□□□□□ -0.23
TP53-220ENST00000610623 EIF5P55010 431 aaKnown RBP13.64□□□□□ -0.23
TP53-220ENST00000610623 EVA1CP58658 441 aa13.64□□□□□ -0.23
TP53-220ENST00000610623 DNAJC21Q5F1R6 531 aaKnown RBP13.64□□□□□ -0.23
TP53-220ENST00000610623 TADA2BQ86TJ2 420 aa13.64□□□□□ -0.23
TP53-220ENST00000610623 SIL1Q9H173 461 aa13.64□□□□□ -0.23
TP53-220ENST00000610623 TUBE1Q9UJT0 475 aa13.64□□□□□ -0.23
TP53-220ENST00000610623 TNS2Q63HR2 1409 aa13.64□□□□□ -0.23
TP53-220ENST00000610623 EAF2Q96CJ1 260 aaPredicted RBP13.63□□□□□ -0.23
TP53-220ENST00000610623 MYD88Q99836 296 aa13.63□□□□□ -0.23
TP53-220ENST00000610623 BICC1Q9H694 974 aaKnown RBP13.63□□□□□ -0.23
TP53-220ENST00000610623 CDC23Q9UJX2 597 aa13.63□□□□□ -0.23
TP53-220ENST00000610623 SPTLC2O15270 562 aa13.63□□□□□ -0.23
TP53-220ENST00000610623 CMA1P23946 247 aa13.63□□□□□ -0.23
TP53-220ENST00000610623 DHX32Q7L7V1 743 aaKnown RBP13.63□□□□□ -0.23
TP53-220ENST00000610623 CNNM3Q8NE01 707 aa13.63□□□□□ -0.23
TP53-220ENST00000610623 PLBD2Q8NHP8 589 aa13.63□□□□□ -0.23
TP53-220ENST00000610623 KAZALD1Q96I82 304 aa13.63□□□□□ -0.23
TP53-220ENST00000610623 BOLA2Q9H3K6 86 aa13.63□□□□□ -0.23
TP53-220ENST00000610623 TOGARAM1Q9Y4F4 1720 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms