RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 VWA3AA6NCI4 1184 aa11.81□□□□□ -0.52
CTCFL-216ENST00000608263 ERCC3P19447 782 aa11.81□□□□□ -0.52
CTCFL-216ENST00000608263 CCDC191Q8NCU4 936 aa11.81□□□□□ -0.52
CTCFL-216ENST00000608263 ZNF274Q96GC6 653 aaPredicted RBP11.81□□□□□ -0.52
CTCFL-216ENST00000608263 CENPHQ9H3R5 247 aa11.81□□□□□ -0.52
CTCFL-216ENST00000608263 STK32BQ9NY57 414 aa11.81□□□□□ -0.52
CTCFL-216ENST00000608263 SERTAD1Q9UHV2 236 aa11.81□□□□□ -0.52
CTCFL-216ENST00000608263 ZMYM1Q5SVZ6 1142 aa11.81□□□□□ -0.52
CTCFL-216ENST00000608263 ZNF710Q8N1W2 664 aa11.81□□□□□ -0.52
CTCFL-216ENST00000608263 CDK5RAP3Q96JB5 506 aa11.81□□□□□ -0.52
CTCFL-216ENST00000608263 CWC15Q9P013 229 aaKnown RBP11.81□□□□□ -0.52
CTCFL-216ENST00000608263 PCDHA5Q9Y5H7 936 aa11.81□□□□□ -0.52
CTCFL-216ENST00000608263 TRIM75PA6NK02 468 aa11.81□□□□□ -0.52
CTCFL-216ENST00000608263 LINC00301Q8NCQ3 95 aa11.81□□□□□ -0.52
CTCFL-216ENST00000608263 ZBTB1Q9Y2K1 713 aa11.81□□□□□ -0.52
CTCFL-216ENST00000608263 LOC102724428A0A0B4J2F2 783 aa11.8□□□□□ -0.52
CTCFL-216ENST00000608263 SEC31AO94979 1220 aaKnown RBP11.8□□□□□ -0.52
CTCFL-216ENST00000608263 SIK1P57059 783 aa11.8□□□□□ -0.52
CTCFL-216ENST00000608263 ST3GAL1Q11201 340 aa11.8□□□□□ -0.52
CTCFL-216ENST00000608263 STIM1Q13586 685 aa11.8□□□□□ -0.52
CTCFL-216ENST00000608263 FKBP15Q5T1M5 1219 aa11.8□□□□□ -0.52
CTCFL-216ENST00000608263 ATL3Q6DD88 541 aa11.8□□□□□ -0.52
CTCFL-216ENST00000608263 SMIM5Q71RC9 77 aa11.8□□□□□ -0.52
CTCFL-216ENST00000608263 CAPZA3Q96KX2 299 aa11.8□□□□□ -0.52
CTCFL-216ENST00000608263 EPC1Q9H2F5 836 aa11.8□□□□□ -0.52
CTCFL-216ENST00000608263 TRPC5Q9UL62 973 aaPredicted RBP11.8□□□□□ -0.52
CTCFL-216ENST00000608263 GUCA1BQ9UMX6 200 aa11.8□□□□□ -0.52
CTCFL-216ENST00000608263 TSPY2A6NKD2 308 aa11.8□□□□□ -0.52
CTCFL-216ENST00000608263 EIF3JO75822 258 aaKnown RBP11.8□□□□□ -0.52
CTCFL-216ENST00000608263 MYCNP04198 464 aaPredicted RBP11.8□□□□□ -0.52
CTCFL-216ENST00000608263 MCM7P33993 719 aa11.8□□□□□ -0.52
CTCFL-216ENST00000608263 ZNF444Q8N0Y2 327 aaPredicted RBP11.8□□□□□ -0.52
CTCFL-216ENST00000608263 HINFPQ9BQA5 517 aa11.8□□□□□ -0.52
CTCFL-216ENST00000608263 CDCA7Q9BWT1 371 aaPredicted RBP11.8□□□□□ -0.52
CTCFL-216ENST00000608263 SPTLC3Q9NUV7 552 aa11.8□□□□□ -0.52
CTCFL-216ENST00000608263 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.8□□□□□ -0.521e-7■■□□□ 12
CTCFL-216ENST00000608263 MROH1Q8NDA8 1641 aa11.8□□□□□ -0.52
CTCFL-216ENST00000608263 YEATS4O95619 227 aa11.8□□□□□ -0.52
CTCFL-216ENST00000608263 RNF41Q9H4P4 317 aaPredicted RBP11.8□□□□□ -0.52
CTCFL-216ENST00000608263 VEZTQ9HBM0 779 aa11.8□□□□□ -0.52
CTCFL-216ENST00000608263 CALCOCO1Q9P1Z2 691 aa11.8□□□□□ -0.52
CTCFL-216ENST00000608263 CCDC175P0C221 793 aa11.79□□□□□ -0.52
CTCFL-216ENST00000608263 POLD1P28340 1107 aa11.79□□□□□ -0.52
CTCFL-216ENST00000608263 PPARDQ03181 441 aa11.79□□□□□ -0.52
CTCFL-216ENST00000608263 DMTNQ08495 405 aa11.79□□□□□ -0.52
CTCFL-216ENST00000608263 IFIT1BQ5T764 474 aaKnown RBP11.79□□□□□ -0.52
CTCFL-216ENST00000608263 FBXO38Q6PIJ6 1188 aa11.79□□□□□ -0.52
CTCFL-216ENST00000608263 KAZALD1Q96I82 304 aa11.79□□□□□ -0.52
CTCFL-216ENST00000608263 TIGD1Q96MW7 591 aa11.79□□□□□ -0.52
CTCFL-216ENST00000608263 VPS54Q9P1Q0 977 aa11.79□□□□□ -0.52
CTCFL-216ENST00000608263 V9GY48 417 aaPredicted RBP11.79□□□□□ -0.52
CTCFL-216ENST00000608263 PPLO60437 1756 aa11.79□□□□□ -0.52
CTCFL-216ENST00000608263 PPP2R3AQ06190 1150 aa11.79□□□□□ -0.52
CTCFL-216ENST00000608263 CCDC181Q5TID7 509 aa11.79□□□□□ -0.52
CTCFL-216ENST00000608263 PPP1R13BQ96KQ4 1090 aa11.79□□□□□ -0.52
CTCFL-216ENST00000608263 GDAP1L1Q96MZ0 367 aa11.79□□□□□ -0.52
CTCFL-216ENST00000608263 ETF1P62495 437 aaKnown RBP11.79□□□□□ -0.52
CTCFL-216ENST00000608263 SEPT12Q8IYM1 358 aa11.79□□□□□ -0.52
CTCFL-216ENST00000608263 IGSF22Q8N9C0 903 aa11.79□□□□□ -0.52
CTCFL-216ENST00000608263 BLZF1Q9H2G9 400 aa11.79□□□□□ -0.52
CTCFL-216ENST00000608263 ARHGEF28Q8N1W1 1705 aaKnown RBP11.79□□□□□ -0.52
CTCFL-216ENST00000608263 OVOS2A0A0J9YW53 1432 aa11.78□□□□□ -0.52
CTCFL-216ENST00000608263 OVOS2Q6IE36 1432 aa11.78□□□□□ -0.52
CTCFL-216ENST00000608263 UQCRFS1P1P0C7P4 283 aa11.78□□□□□ -0.52
CTCFL-216ENST00000608263 IDEP14735 1019 aa11.78□□□□□ -0.52
CTCFL-216ENST00000608263 PHKA1P46020 1223 aa11.78□□□□□ -0.52
CTCFL-216ENST00000608263 CCDC96Q2M329 555 aa11.78□□□□□ -0.52
CTCFL-216ENST00000608263 CARD10Q9BWT7 1032 aa11.78□□□□□ -0.52
CTCFL-216ENST00000608263 RTEL1Q9NZ71 1219 aa11.78□□□□□ -0.52
CTCFL-216ENST00000608263 CLEC11AQ9Y240 323 aa11.78□□□□□ -0.52
CTCFL-216ENST00000608263 WDR17Q8IZU2 1322 aa11.78□□□□□ -0.52
CTCFL-216ENST00000608263 CCDC194A0A1B0GVG4 234 aa11.78□□□□□ -0.52
CTCFL-216ENST00000608263 UBA7P41226 1012 aa11.78□□□□□ -0.52
CTCFL-216ENST00000608263 FAM196AQ6ZSG2 479 aa11.78□□□□□ -0.52
CTCFL-216ENST00000608263 PLA2G4DQ86XP0 818 aa11.78□□□□□ -0.52
CTCFL-216ENST00000608263 KRT23Q9C075 422 aa11.78□□□□□ -0.52
CTCFL-216ENST00000608263 VPS18Q9P253 973 aa11.78□□□□□ -0.52
CTCFL-216ENST00000608263 ADGRL3Q9HAR2 1447 aa11.78□□□□□ -0.52
CTCFL-216ENST00000608263 CYP27B1O15528 508 aa11.78□□□□□ -0.52
CTCFL-216ENST00000608263 EPS15P42566 896 aa11.78□□□□□ -0.52
CTCFL-216ENST00000608263 SMYD4Q8IYR2 804 aaPredicted RBP11.78□□□□□ -0.52
CTCFL-216ENST00000608263 TRIM47Q96LD4 638 aa11.78□□□□□ -0.52
CTCFL-216ENST00000608263 GREM2Q9H772 168 aa11.78□□□□□ -0.52
CTCFL-216ENST00000608263 CEP170BQ9Y4F5 1589 aaPredicted RBP11.78□□□□□ -0.52
CTCFL-216ENST00000608263 SPATA31A3Q5VYP0 1347 aa11.78□□□□□ -0.52
CTCFL-216ENST00000608263 SOGA3Q5TF21 947 aa11.77□□□□□ -0.52
CTCFL-216ENST00000608263 OGFOD1Q8N543 542 aa11.77□□□□□ -0.52
CTCFL-216ENST00000608263 NEK11Q8NG66 645 aa11.77□□□□□ -0.52
CTCFL-216ENST00000608263 SDR42E1Q8WUS8 393 aa11.77□□□□□ -0.52
CTCFL-216ENST00000608263 ESR2Q92731 530 aa11.77□□□□□ -0.52
CTCFL-216ENST00000608263 CRACR2AQ9BSW2 395 aa11.77□□□□□ -0.52
CTCFL-216ENST00000608263 JADE2Q9NQC1 790 aa11.77□□□□□ -0.52
CTCFL-216ENST00000608263 ST7Q9NRC1 585 aa11.77□□□□□ -0.52
CTCFL-216ENST00000608263 GJA3Q9Y6H8 435 aa11.77□□□□□ -0.52
CTCFL-216ENST00000608263 DIP2CQ9Y2E4 1556 aa11.77□□□□□ -0.52
CTCFL-216ENST00000608263 KIF20AO95235 890 aa11.77□□□□□ -0.53
CTCFL-216ENST00000608263 RXRBP28702 533 aa11.77□□□□□ -0.53
CTCFL-216ENST00000608263 MTIF2P46199 727 aaKnown RBP11.77□□□□□ -0.53
CTCFL-216ENST00000608263 NR5A1Q13285 461 aa11.77□□□□□ -0.53
CTCFL-216ENST00000608263 SCARF1Q14162 830 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms