RNA–Protein interactions for RNA: ENST00000606454.1

AL390728.4-204, humanhuman

TSL 3

Gene AL390728.4, Length 660 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390728.4-204ENST00000606454 MAP3K9P80192 1104 aa18.42■□□□□ 0.54
AL390728.4-204ENST00000606454 CERS3Q8IU89 383 aa18.42■□□□□ 0.54
AL390728.4-204ENST00000606454 REM2Q8IYK8 340 aaPredicted RBP18.42■□□□□ 0.54
AL390728.4-204ENST00000606454 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.42■□□□□ 0.54
AL390728.4-204ENST00000606454 CSRNP1Q96S65 589 aa18.42■□□□□ 0.54
AL390728.4-204ENST00000606454 ZNF341Q9BYN7 854 aa18.42■□□□□ 0.54
AL390728.4-204ENST00000606454 PDE6AP16499 860 aa18.41■□□□□ 0.54
AL390728.4-204ENST00000606454 WRNIP1Q96S55 665 aa18.41■□□□□ 0.54
AL390728.4-204ENST00000606454 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.41■□□□□ 0.541e-17■□□□□ 9.6
AL390728.4-204ENST00000606454 CSADQ9Y600 493 aa18.41■□□□□ 0.54
AL390728.4-204ENST00000606454 TTC41PQ6P2S7 1318 aa18.41■□□□□ 0.54
AL390728.4-204ENST00000606454 THSD7BQ9C0I4 1608 aa18.41■□□□□ 0.54
AL390728.4-204ENST00000606454 DDTLA6NHG4 134 aaPredicted RBP18.4■□□□□ 0.54
AL390728.4-204ENST00000606454 ERC2O15083 957 aa18.4■□□□□ 0.54
AL390728.4-204ENST00000606454 IGHDP01880 384 aa18.4■□□□□ 0.54
AL390728.4-204ENST00000606454 DYNLL1P63167 89 aaKnown RBP18.4■□□□□ 0.54
AL390728.4-204ENST00000606454 MKRN3Q13064 507 aaKnown RBP18.4■□□□□ 0.54
AL390728.4-204ENST00000606454 SPRYD7Q5W111 196 aa18.4■□□□□ 0.54
AL390728.4-204ENST00000606454 TSHZ3Q63HK5 1081 aa18.4■□□□□ 0.54
AL390728.4-204ENST00000606454 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.4■□□□□ 0.54
AL390728.4-204ENST00000606454 SH3BP5LQ7L8J4 393 aa18.4■□□□□ 0.54
AL390728.4-204ENST00000606454 MIGA1Q8NAN2 632 aa18.4■□□□□ 0.54
AL390728.4-204ENST00000606454 TGFBRAP1Q8WUH2 860 aa18.4■□□□□ 0.54
AL390728.4-204ENST00000606454 OSBPL5Q9H0X9 879 aaPredicted RBP18.4■□□□□ 0.54
AL390728.4-204ENST00000606454 MAST2Q6P0Q8 1798 aa18.4■□□□□ 0.54
AL390728.4-204ENST00000606454 FOXN1O15353 648 aa18.39■□□□□ 0.53
AL390728.4-204ENST00000606454 CA12O43570 354 aa18.39■□□□□ 0.53
AL390728.4-204ENST00000606454 MX1P20591 662 aa18.39■□□□□ 0.53
AL390728.4-204ENST00000606454 VGLL4Q14135 290 aa18.39■□□□□ 0.53
AL390728.4-204ENST00000606454 SMC5Q8IY18 1101 aa18.39■□□□□ 0.53
AL390728.4-204ENST00000606454 WNK4Q96J92 1243 aa18.39■□□□□ 0.53
AL390728.4-204ENST00000606454 ELP3Q9H9T3 547 aa18.39■□□□□ 0.53
AL390728.4-204ENST00000606454 ZNF532Q9HCE3 1301 aa18.39■□□□□ 0.53
AL390728.4-204ENST00000606454 ZBTB48P10074 688 aaPredicted RBP18.38■□□□□ 0.53
AL390728.4-204ENST00000606454 OTUD7AQ8TE49 926 aaPredicted RBP18.38■□□□□ 0.53
AL390728.4-204ENST00000606454 ZNF112Q9UJU3 913 aa18.38■□□□□ 0.53
AL390728.4-204ENST00000606454 ATRNL1Q5VV63 1379 aa18.38■□□□□ 0.53
AL390728.4-204ENST00000606454 MAGEB6P1A0A0J9YX57 407 aa18.37■□□□□ 0.53
AL390728.4-204ENST00000606454 TCRBV5S4A2TA0A5A2 114 aa18.37■□□□□ 0.53
AL390728.4-204ENST00000606454 GLRX3O76003 335 aaKnown RBP18.37■□□□□ 0.53
AL390728.4-204ENST00000606454 ADD2P35612 726 aa18.37■□□□□ 0.53
AL390728.4-204ENST00000606454 CTCFP49711 727 aaPredicted RBP18.37■□□□□ 0.53
AL390728.4-204ENST00000606454 B4GALNT3Q6L9W6 998 aa18.37■□□□□ 0.53
AL390728.4-204ENST00000606454 ZSCAN25Q6NSZ9 544 aa18.37■□□□□ 0.53
AL390728.4-204ENST00000606454 MAPKAPK5Q8IW41 473 aa18.37■□□□□ 0.53
AL390728.4-204ENST00000606454 ZKSCAN4Q969J2 545 aaPredicted RBP18.37■□□□□ 0.53
AL390728.4-204ENST00000606454 RIOK1Q9BRS2 568 aaKnown RBP18.37■□□□□ 0.53
AL390728.4-204ENST00000606454 DHX36Q9H2U1 1008 aaKnown RBP18.37■□□□□ 0.53
AL390728.4-204ENST00000606454 COL2A1P02458 1487 aaPredicted RBP18.36■□□□□ 0.53
AL390728.4-204ENST00000606454 FLT1P17948 1338 aa18.36■□□□□ 0.53
AL390728.4-204ENST00000606454 USP5P45974 858 aa18.36■□□□□ 0.53
AL390728.4-204ENST00000606454 MAP3K10Q02779 954 aa18.36■□□□□ 0.53
AL390728.4-204ENST00000606454 SREBF2Q12772 1141 aa18.36■□□□□ 0.53
AL390728.4-204ENST00000606454 PI4K2BQ8TCG2 481 aa18.36■□□□□ 0.53
AL390728.4-204ENST00000606454 OPTNQ96CV9 577 aa18.36■□□□□ 0.53
AL390728.4-204ENST00000606454 LNPKQ9C0E8 428 aa18.36■□□□□ 0.53
AL390728.4-204ENST00000606454 SALL3Q9BXA9 1300 aa18.35■□□□□ 0.53
AL390728.4-204ENST00000606454 MANSC4A6NHS7 340 aaPredicted RBP18.35■□□□□ 0.53
AL390728.4-204ENST00000606454 TBC1D12O60347 775 aa18.35■□□□□ 0.53
AL390728.4-204ENST00000606454 INPP5BP32019 993 aa18.35■□□□□ 0.53
AL390728.4-204ENST00000606454 TM4SF4P48230 202 aa18.35■□□□□ 0.53
AL390728.4-204ENST00000606454 INHBEP58166 350 aa18.35■□□□□ 0.53
AL390728.4-204ENST00000606454 UBE3CQ15386 1083 aa18.35■□□□□ 0.53
AL390728.4-204ENST00000606454 KBTBD3Q8NAB2 608 aa18.35■□□□□ 0.53
AL390728.4-204ENST00000606454 PI4KBQ9UBF8 816 aa18.35■□□□□ 0.53
AL390728.4-204ENST00000606454 SNCAIPQ9Y6H5 919 aa18.35■□□□□ 0.53
AL390728.4-204ENST00000606454 DOCK2Q92608 1830 aa18.35■□□□□ 0.53
AL390728.4-204ENST00000606454 SPDYE5A6NIY4 337 aa18.34■□□□□ 0.53
AL390728.4-204ENST00000606454 PHF20L1A8MW92 1017 aa18.34■□□□□ 0.53
AL390728.4-204ENST00000606454 GJA5P36382 358 aa18.34■□□□□ 0.53
AL390728.4-204ENST00000606454 NUCB1Q02818 461 aa18.34■□□□□ 0.53
AL390728.4-204ENST00000606454 CHD1LQ86WJ1 897 aa18.34■□□□□ 0.53
AL390728.4-204ENST00000606454 ERO1BQ86YB8 467 aa18.34■□□□□ 0.53
AL390728.4-204ENST00000606454 OTUD5Q96G74 571 aa18.34■□□□□ 0.53
AL390728.4-204ENST00000606454 CRNKL1Q9BZJ0 848 aaKnown RBP18.34■□□□□ 0.53
AL390728.4-204ENST00000606454 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.34■□□□□ 0.53
AL390728.4-204ENST00000606454 RNF186Q9NXI6 227 aa18.34■□□□□ 0.53
AL390728.4-204ENST00000606454 STAP2Q9UGK3 403 aa18.34■□□□□ 0.53
AL390728.4-204ENST00000606454 MYO5AQ9Y4I1 1855 aaKnown RBP18.33■□□□□ 0.53
AL390728.4-204ENST00000606454 HSPA8P11142 646 aaKnown RBP18.33■□□□□ 0.52
AL390728.4-204ENST00000606454 LBX1P52954 281 aa18.33■□□□□ 0.52
AL390728.4-204ENST00000606454 PDE1AP54750 535 aa18.33■□□□□ 0.52
AL390728.4-204ENST00000606454 LRRFIP1Q32MZ4 808 aaKnown RBP18.33■□□□□ 0.52
AL390728.4-204ENST00000606454 SLFNL1Q499Z3 407 aa18.33■□□□□ 0.52
AL390728.4-204ENST00000606454 NOL9Q5SY16 702 aaKnown RBP18.33■□□□□ 0.52
AL390728.4-204ENST00000606454 CNKSR2Q8WXI2 1034 aa18.33■□□□□ 0.52
AL390728.4-204ENST00000606454 SAGE1Q9NXZ1 904 aa18.33■□□□□ 0.52
AL390728.4-204ENST00000606454 SAP30BPQ9UHR5 308 aaKnown RBP18.33■□□□□ 0.52
AL390728.4-204ENST00000606454 HERC5Q9UII4 1024 aaKnown RBP18.33■□□□□ 0.52
AL390728.4-204ENST00000606454 PALD1Q9ULE6 856 aa18.33■□□□□ 0.52
AL390728.4-204ENST00000606454 CTNND1O60716 968 aaKnown RBP18.32■□□□□ 0.52
AL390728.4-204ENST00000606454 TRPA1O75762 1119 aa18.32■□□□□ 0.52
AL390728.4-204ENST00000606454 HLA-DOAP06340 250 aa18.32■□□□□ 0.52
AL390728.4-204ENST00000606454 ZFYP08048 801 aaPredicted RBP18.32■□□□□ 0.52
AL390728.4-204ENST00000606454 SLURP2P0DP57 97 aa18.32■□□□□ 0.52
AL390728.4-204ENST00000606454 FOXP4Q8IVH2 680 aaPredicted RBP18.32■□□□□ 0.52
AL390728.4-204ENST00000606454 TSKSQ9UJT2 592 aa18.32■□□□□ 0.52
AL390728.4-204ENST00000606454 FAM196BA6NMK8 535 aa18.31■□□□□ 0.52
AL390728.4-204ENST00000606454 MBD4O95243 580 aa18.31■□□□□ 0.52
AL390728.4-204ENST00000606454 CHGBP05060 677 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms