RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 HAUS3Q68CZ6 603 aa23.6■■□□□ 1.37
SH3D19-211ENST00000604030 TRAF5O00463 557 aa23.6■■□□□ 1.37
SH3D19-211ENST00000604030 PAK2Q13177 524 aa23.6■■□□□ 1.37
SH3D19-211ENST00000604030 PDE4DQ08499 809 aa23.59■■□□□ 1.37
SH3D19-211ENST00000604030 WDR78Q5VTH9 848 aa23.59■■□□□ 1.37
SH3D19-211ENST00000604030 IL2RBP14784 551 aa23.59■■□□□ 1.37
SH3D19-211ENST00000604030 SLC9C1Q4G0N8 1177 aa23.59■■□□□ 1.37
SH3D19-211ENST00000604030 CCDC84Q86UT8 332 aaPredicted RBP23.59■■□□□ 1.37
SH3D19-211ENST00000604030 KCNK9Q9NPC2 374 aa23.59■■□□□ 1.37
SH3D19-211ENST00000604030 DNMT1P26358 1616 aaKnown RBP23.59■■□□□ 1.37
SH3D19-211ENST00000604030 MBD4O95243 580 aa23.58■■□□□ 1.37
SH3D19-211ENST00000604030 INPP5BP32019 993 aa23.58■■□□□ 1.37
SH3D19-211ENST00000604030 IL13P35225 146 aa23.58■■□□□ 1.37
SH3D19-211ENST00000604030 CCT6AP40227 531 aaKnown RBP23.58■■□□□ 1.37
SH3D19-211ENST00000604030 TXNDC16Q9P2K2 825 aa23.58■■□□□ 1.37
SH3D19-211ENST00000604030 UTP11Q9Y3A2 253 aaKnown RBP23.58■■□□□ 1.37
SH3D19-211ENST00000604030 YTHDC2Q9H6S0 1430 aaKnown RBP23.58■■□□□ 1.37
SH3D19-211ENST00000604030 PZPP20742 1482 aa23.58■■□□□ 1.37
SH3D19-211ENST00000604030 HOXC9P31274 260 aa23.58■■□□□ 1.37
SH3D19-211ENST00000604030 TPTE2Q6XPS3 522 aa23.58■■□□□ 1.37
SH3D19-211ENST00000604030 CSGALNACT2Q8N6G5 542 aa23.58■■□□□ 1.37
SH3D19-211ENST00000604030 ATP11AP98196 1134 aa23.58■■□□□ 1.36
SH3D19-211ENST00000604030 UBL4BQ8N7F7 174 aa23.58■■□□□ 1.36
SH3D19-211ENST00000604030 LZTS2Q9BRK4 669 aa23.58■■□□□ 1.36
SH3D19-211ENST00000604030 DSCC1Q9BVC3 393 aa23.58■■□□□ 1.36
SH3D19-211ENST00000604030 ADGRL2O95490 1459 aa23.58■■□□□ 1.36
SH3D19-211ENST00000604030 CALUO43852 315 aaPredicted RBP23.57■■□□□ 1.36
SH3D19-211ENST00000604030 LDHBP07195 334 aaKnown RBP23.57■■□□□ 1.36
SH3D19-211ENST00000604030 DIS3L2Q8IYB7 885 aaKnown RBP23.57■■□□□ 1.36
SH3D19-211ENST00000604030 CETN3O15182 167 aa23.57■■□□□ 1.36
SH3D19-211ENST00000604030 ELF2Q15723 593 aa23.57■■□□□ 1.36
SH3D19-211ENST00000604030 CCDC63Q8NA47 563 aa23.57■■□□□ 1.36
SH3D19-211ENST00000604030 RGS22Q8NE09 1264 aa23.57■■□□□ 1.36
SH3D19-211ENST00000604030 TMEM110-MUSTN1A8MSY1 372 aa23.57■■□□□ 1.36
SH3D19-211ENST00000604030 RAPGEF1Q13905 1077 aa23.57■■□□□ 1.36
SH3D19-211ENST00000604030 ZNF174Q15697 407 aa23.57■■□□□ 1.36
SH3D19-211ENST00000604030 SEC62Q99442 399 aaKnown RBP23.57■■□□□ 1.36
SH3D19-211ENST00000604030 PCDH11XQ9BZA7 1347 aa23.57■■□□□ 1.36
SH3D19-211ENST00000604030 PCDH11YQ9BZA8 1340 aa23.57■■□□□ 1.36
SH3D19-211ENST00000604030 WDR62O43379 1518 aa23.57■■□□□ 1.36
SH3D19-211ENST00000604030 ATP6V1AP38606 617 aa23.57■■□□□ 1.36
SH3D19-211ENST00000604030 ASIC2Q16515 512 aa23.57■■□□□ 1.36
SH3D19-211ENST00000604030 SYCE1Q8N0S2 351 aa23.57■■□□□ 1.36
SH3D19-211ENST00000604030 SDAD1Q9NVU7 687 aaKnown RBP eCLIP23.57■■□□□ 1.362e-6■■■■□ 21.2
SH3D19-211ENST00000604030 IRX3P78415 501 aaPredicted RBP23.56■■□□□ 1.36
SH3D19-211ENST00000604030 CHRNA2Q15822 529 aa23.56■■□□□ 1.36
SH3D19-211ENST00000604030 TAOK1Q7L7X3 1001 aa23.56■■□□□ 1.36
SH3D19-211ENST00000604030 NFATC2IPQ8NCF5 419 aa23.56■■□□□ 1.36
SH3D19-211ENST00000604030 MAP7D1Q3KQU3 841 aa23.56■■□□□ 1.36
SH3D19-211ENST00000604030 PARP10Q53GL7 1025 aa23.56■■□□□ 1.36
SH3D19-211ENST00000604030 DMRT2Q9Y5R5 561 aa23.56■■□□□ 1.36
SH3D19-211ENST00000604030 WHAMMP3Q1A5X7 153 aa23.56■■□□□ 1.36
SH3D19-211ENST00000604030 TTC38Q5R3I4 469 aa23.56■■□□□ 1.36
SH3D19-211ENST00000604030 FYB2Q5VWT5 728 aa23.56■■□□□ 1.36
SH3D19-211ENST00000604030 RAB3IL1Q8TBN0 382 aa23.56■■□□□ 1.36
SH3D19-211ENST00000604030 VPS16Q9H269 839 aa23.56■■□□□ 1.36
SH3D19-211ENST00000604030 NFE2L3Q9Y4A8 694 aa23.56■■□□□ 1.36
SH3D19-211ENST00000604030 GOLGA6BA6NDN3 693 aa23.56■■□□□ 1.36
SH3D19-211ENST00000604030 TNFAIP3P21580 790 aa23.56■■□□□ 1.36
SH3D19-211ENST00000604030 PUM3Q15397 648 aaKnown RBP23.56■■□□□ 1.36
SH3D19-211ENST00000604030 KRT24Q2M2I5 525 aa23.56■■□□□ 1.36
SH3D19-211ENST00000604030 CIB2O75838 187 aa23.56■■□□□ 1.36
SH3D19-211ENST00000604030 POSTNQ15063 836 aa23.56■■□□□ 1.36
SH3D19-211ENST00000604030 KRT25Q7Z3Z0 450 aa23.56■■□□□ 1.36
SH3D19-211ENST00000604030 STMN2Q93045 179 aa23.56■■□□□ 1.36
SH3D19-211ENST00000604030 PLCB1Q9NQ66 1216 aa23.56■■□□□ 1.36
SH3D19-211ENST00000604030 TRIM35Q9UPQ4 493 aa23.55■■□□□ 1.36
SH3D19-211ENST00000604030 PPFIA4O75335 1185 aa23.55■■□□□ 1.36
SH3D19-211ENST00000604030 CACNA2D3Q8IZS8 1091 aa23.55■■□□□ 1.36
SH3D19-211ENST00000604030 MAP3K19Q56UN5 1328 aa23.55■■□□□ 1.36
SH3D19-211ENST00000604030 CPA1P15085 419 aa23.55■■□□□ 1.36
SH3D19-211ENST00000604030 ARID4AP29374 1257 aaPredicted RBP23.55■■□□□ 1.36
SH3D19-211ENST00000604030 LMNTD2Q8IXW0 634 aa23.55■■□□□ 1.36
SH3D19-211ENST00000604030 IQSEC3Q9UPP2 1182 aaPredicted RBP23.55■■□□□ 1.36
SH3D19-211ENST00000604030 IBTKQ9P2D0 1353 aaPredicted RBP23.54■■□□□ 1.36
SH3D19-211ENST00000604030 NOL3O60936 208 aaKnown RBP23.54■■□□□ 1.36
SH3D19-211ENST00000604030 ADAMTS2O95450 1211 aa23.54■■□□□ 1.36
SH3D19-211ENST00000604030 INF2Q27J81 1249 aa23.54■■□□□ 1.36
SH3D19-211ENST00000604030 SH2D4AQ9H788 454 aa23.54■■□□□ 1.36
SH3D19-211ENST00000604030 POLR2DO15514 142 aaKnown RBP23.54■■□□□ 1.36
SH3D19-211ENST00000604030 ADALQ6DHV7 355 aa23.54■■□□□ 1.36
SH3D19-211ENST00000604030 MIGA1Q8NAN2 632 aa23.54■■□□□ 1.36
SH3D19-211ENST00000604030 ERCC5P28715 1186 aaPredicted RBP23.54■■□□□ 1.36
SH3D19-211ENST00000604030 NGLY1Q96IV0 654 aa23.54■■□□□ 1.36
SH3D19-211ENST00000604030 TCHPQ9BT92 498 aa23.54■■□□□ 1.36
SH3D19-211ENST00000604030 WWC3Q9ULE0 1092 aa23.54■■□□□ 1.36
SH3D19-211ENST00000604030 SLC4A8Q2Y0W8 1093 aa23.54■■□□□ 1.36
SH3D19-211ENST00000604030 CFAP221Q4G0U5 840 aa23.54■■□□□ 1.36
SH3D19-211ENST00000604030 CCDC25Q86WR0 208 aa23.54■■□□□ 1.36
SH3D19-211ENST00000604030 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.54■■□□□ 1.36
SH3D19-211ENST00000604030 OTUD7AQ8TE49 926 aaPredicted RBP23.54■■□□□ 1.36
SH3D19-211ENST00000604030 B4E1Z4 1266 aa23.53■■□□□ 1.36
SH3D19-211ENST00000604030 KRT9P35527 623 aa23.53■■□□□ 1.36
SH3D19-211ENST00000604030 NCBP1Q09161 790 aaKnown RBP23.53■■□□□ 1.36
SH3D19-211ENST00000604030 SPATS2Q86XZ4 545 aaKnown RBP23.53■■□□□ 1.36
SH3D19-211ENST00000604030 OGFOD1Q8N543 542 aa23.53■■□□□ 1.36
SH3D19-211ENST00000604030 SIRT1Q96EB6 747 aa23.53■■□□□ 1.36
SH3D19-211ENST00000604030 VIMP08670 466 aaKnown RBP23.53■■□□□ 1.36
SH3D19-211ENST00000604030 G2E3Q7L622 706 aa23.53■■□□□ 1.36
SH3D19-211ENST00000604030 LETM2Q2VYF4 491 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 188.5 ms