RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 ADAMTS2O95450 1211 aa10.71□□□□□ -0.7
CSMD1-217ENST00000602723 PARP1P09874 1014 aaKnown RBP10.71□□□□□ -0.7
CSMD1-217ENST00000602723 ASIC2Q16515 512 aa10.71□□□□□ -0.7
CSMD1-217ENST00000602723 PPP1R21Q6ZMI0 780 aa10.71□□□□□ -0.7
CSMD1-217ENST00000602723 USP26Q9BXU7 913 aa10.71□□□□□ -0.7
CSMD1-217ENST00000602723 PAK2Q13177 524 aa10.71□□□□□ -0.7
CSMD1-217ENST00000602723 ZNF365Q70YC5 407 aa10.71□□□□□ -0.7
CSMD1-217ENST00000602723 RABEP2Q9H5N1 569 aa10.71□□□□□ -0.7
CSMD1-217ENST00000602723 MCM9Q9NXL9 1143 aa10.71□□□□□ -0.7
CSMD1-217ENST00000602723 ZBTB21Q9ULJ3 1066 aa10.71□□□□□ -0.7
CSMD1-217ENST00000602723 EXOC5O00471 708 aa10.71□□□□□ -0.7
CSMD1-217ENST00000602723 OAS2P29728 719 aaKnown RBP10.71□□□□□ -0.7
CSMD1-217ENST00000602723 SMTNP53814 917 aa10.71□□□□□ -0.7
CSMD1-217ENST00000602723 CROCCP2Q86T23 111 aa10.71□□□□□ -0.7
CSMD1-217ENST00000602723 HHATQ5VTY9 493 aa10.7□□□□□ -0.7
CSMD1-217ENST00000602723 MRPL50Q8N5N7 158 aaKnown RBP10.7□□□□□ -0.7
CSMD1-217ENST00000602723 RNF10Q8N5U6 811 aaKnown RBP10.7□□□□□ -0.7
CSMD1-217ENST00000602723 SECISBP2LQ93073 1101 aaKnown RBP10.7□□□□□ -0.7
CSMD1-217ENST00000602723 IMPACTQ9P2X3 320 aa10.7□□□□□ -0.7
CSMD1-217ENST00000602723 KRT9P35527 623 aa10.7□□□□□ -0.7
CSMD1-217ENST00000602723 MTMR3Q13615 1198 aa10.7□□□□□ -0.7
CSMD1-217ENST00000602723 WHAMMP3Q1A5X7 153 aa10.7□□□□□ -0.7
CSMD1-217ENST00000602723 ASIC3Q9UHC3 531 aa10.7□□□□□ -0.7
CSMD1-217ENST00000602723 ADGBQ8N7X0 1667 aa10.7□□□□□ -0.7
CSMD1-217ENST00000602723 TRPC3Q13507 836 aa10.7□□□□□ -0.7
CSMD1-217ENST00000602723 VSIG1Q86XK7 387 aa10.7□□□□□ -0.7
CSMD1-217ENST00000602723 PLEKHM2Q8IWE5 1019 aa10.7□□□□□ -0.7
CSMD1-217ENST00000602723 GIPC1O14908 333 aa10.7□□□□□ -0.7
CSMD1-217ENST00000602723 KSR2Q6VAB6 950 aa10.7□□□□□ -0.7
CSMD1-217ENST00000602723 ZNF622Q969S3 477 aaKnown RBP eCLIP10.7□□□□□ -0.76e-7■■□□□ 11.7
CSMD1-217ENST00000602723 RBSNQ9H1K0 784 aa10.7□□□□□ -0.7
CSMD1-217ENST00000602723 FANCCQ00597 558 aa10.7□□□□□ -0.7
CSMD1-217ENST00000602723 THOC2Q8NI27 1593 aaKnown RBP10.7□□□□□ -0.7
CSMD1-217ENST00000602723 POLR2DO15514 142 aaKnown RBP10.7□□□□□ -0.7
CSMD1-217ENST00000602723 LONRF3Q496Y0 759 aa10.7□□□□□ -0.7
CSMD1-217ENST00000602723 SH2D4BQ5SQS7 431 aa10.7□□□□□ -0.7
CSMD1-217ENST00000602723 RXRAP19793 462 aa10.7□□□□□ -0.7
CSMD1-217ENST00000602723 ZNF174Q15697 407 aa10.7□□□□□ -0.7
CSMD1-217ENST00000602723 ANO1Q5XXA6 986 aa10.7□□□□□ -0.7
CSMD1-217ENST00000602723 RAPGEF6Q8TEU7 1601 aa10.7□□□□□ -0.7
CSMD1-217ENST00000602723 CCNT1O60563 726 aaKnown RBP10.69□□□□□ -0.7
CSMD1-217ENST00000602723 MAP2K2P36507 400 aa10.69□□□□□ -0.7
CSMD1-217ENST00000602723 PPP1R2P41236 205 aa10.69□□□□□ -0.7
CSMD1-217ENST00000602723 PROCA1Q8NCQ7 364 aaPredicted RBP10.69□□□□□ -0.7
CSMD1-217ENST00000602723 RAD50Q92878 1312 aa10.69□□□□□ -0.7
CSMD1-217ENST00000602723 ZMYM4Q5VZL5 1548 aa10.69□□□□□ -0.7
CSMD1-217ENST00000602723 CALUO43852 315 aaPredicted RBP10.69□□□□□ -0.7
CSMD1-217ENST00000602723 TNFAIP3P21580 790 aa10.69□□□□□ -0.7
CSMD1-217ENST00000602723 MAP7Q14244 749 aa10.69□□□□□ -0.7
CSMD1-217ENST00000602723 CCDC117Q8IWD4 279 aaPredicted RBP10.69□□□□□ -0.7
CSMD1-217ENST00000602723 TXNDC9O14530 226 aa10.69□□□□□ -0.7
CSMD1-217ENST00000602723 BACH1O14867 736 aa10.69□□□□□ -0.7
CSMD1-217ENST00000602723 CFAP221Q4G0U5 840 aa10.69□□□□□ -0.7
CSMD1-217ENST00000602723 CEP85Q6P2H3 762 aa10.69□□□□□ -0.7
CSMD1-217ENST00000602723 CCDC89Q8N998 374 aa10.69□□□□□ -0.7
CSMD1-217ENST00000602723 CHMLP26374 656 aa10.69□□□□□ -0.7
CSMD1-217ENST00000602723 SRGAP1Q7Z6B7 1085 aa10.69□□□□□ -0.7
CSMD1-217ENST00000602723 SYCE1Q8N0S2 351 aa10.69□□□□□ -0.7
CSMD1-217ENST00000602723 SETDB2Q96T68 719 aa10.69□□□□□ -0.7
CSMD1-217ENST00000602723 OGFOD1Q8N543 542 aa10.69□□□□□ -0.7
CSMD1-217ENST00000602723 VTI1AQ96AJ9 217 aa10.69□□□□□ -0.7
CSMD1-217ENST00000602723 VCX3AQ9NNX9 186 aa10.69□□□□□ -0.7
CSMD1-217ENST00000602723 FLOT1O75955 427 aa10.69□□□□□ -0.7
CSMD1-217ENST00000602723 TAF12Q16514 161 aa10.69□□□□□ -0.7
CSMD1-217ENST00000602723 CLSTN2Q9H4D0 955 aa10.69□□□□□ -0.7
CSMD1-217ENST00000602723 TSKSQ9UJT2 592 aa10.69□□□□□ -0.7
CSMD1-217ENST00000602723 USH1CQ9Y6N9 552 aa10.69□□□□□ -0.7
CSMD1-217ENST00000602723 SLC8A3P57103 927 aa10.69□□□□□ -0.7
CSMD1-217ENST00000602723 C16orf71Q8IYS4 520 aaPredicted RBP10.69□□□□□ -0.7
CSMD1-217ENST00000602723 GABPB2Q8TAK5 448 aaPredicted RBP10.69□□□□□ -0.7
CSMD1-217ENST00000602723 RAB3IPQ96QF0 476 aaPredicted RBP10.69□□□□□ -0.7
CSMD1-217ENST00000602723 ADGRF5Q8IZF2 1346 aa10.69□□□□□ -0.7
CSMD1-217ENST00000602723 PPIP5K1Q6PFW1 1433 aa10.69□□□□□ -0.7
CSMD1-217ENST00000602723 PAK1Q13153 545 aa10.69□□□□□ -0.7
CSMD1-217ENST00000602723 VPS16Q9H269 839 aa10.69□□□□□ -0.7
CSMD1-217ENST00000602723 ZKSCAN3Q9BRR0 538 aa10.69□□□□□ -0.7
CSMD1-217ENST00000602723 CSGALNACT2Q8N6G5 542 aa10.68□□□□□ -0.7
CSMD1-217ENST00000602723 MIGA1Q8NAN2 632 aa10.68□□□□□ -0.7
CSMD1-217ENST00000602723 GSDMBQ8TAX9 411 aa10.68□□□□□ -0.7
CSMD1-217ENST00000602723 PA2G4Q9UQ80 394 aaKnown RBP10.68□□□□□ -0.7
CSMD1-217ENST00000602723 ABCC1P33527 1531 aa10.68□□□□□ -0.7
CSMD1-217ENST00000602723 IFIH1Q9BYX4 1025 aaKnown RBP10.68□□□□□ -0.7
CSMD1-217ENST00000602723 TMTC1Q8IUR5 882 aa10.68□□□□□ -0.7
CSMD1-217ENST00000602723 HMGXB3Q12766 1538 aa10.68□□□□□ -0.7
CSMD1-217ENST00000602723 ARHGAP6O43182 974 aa10.68□□□□□ -0.7
CSMD1-217ENST00000602723 PPARDQ03181 441 aa10.68□□□□□ -0.7
CSMD1-217ENST00000602723 COPS6Q7L5N1 327 aa10.68□□□□□ -0.7
CSMD1-217ENST00000602723 LLPHQ9BRT6 129 aaKnown RBP10.68□□□□□ -0.7
CSMD1-217ENST00000602723 KIF21AQ7Z4S6 1674 aa10.68□□□□□ -0.7
CSMD1-217ENST00000602723 DDX27Q96GQ7 796 aaKnown RBP10.68□□□□□ -0.7
CSMD1-217ENST00000602723 NUP58Q9BVL2 599 aa10.68□□□□□ -0.7
CSMD1-217ENST00000602723 CARD6Q9BX69 1037 aa10.68□□□□□ -0.7
CSMD1-217ENST00000602723 RASSF2P50749 326 aa10.68□□□□□ -0.7
CSMD1-217ENST00000602723 MUM1Q2TAK8 710 aa10.68□□□□□ -0.7
CSMD1-217ENST00000602723 KRT71Q3SY84 523 aa10.68□□□□□ -0.7
CSMD1-217ENST00000602723 FNBP1Q96RU3 617 aa10.68□□□□□ -0.7
CSMD1-217ENST00000602723 RPS6KB1P23443 525 aa10.68□□□□□ -0.7
CSMD1-217ENST00000602723 KAT6AQ92794 2004 aa10.68□□□□□ -0.7
CSMD1-217ENST00000602723 HARSP12081 509 aaKnown RBP10.68□□□□□ -0.7
CSMD1-217ENST00000602723 SLC9C1Q4G0N8 1177 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 167.2 ms