RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 LRRCC1Q9C099 1032 aa21.37■■□□□ 1.01
IRF3-230ENST00000601809 SMARCA5O60264 1052 aaPredicted RBP21.36■■□□□ 1.01
IRF3-230ENST00000601809 MIGA2Q7L4E1 593 aa21.36■■□□□ 1.01
IRF3-230ENST00000601809 ELP3Q9H9T3 547 aa21.36■■□□□ 1.01
IRF3-230ENST00000601809 TESPA1A2RU30 521 aaPredicted RBP21.35■■□□□ 1.01
IRF3-230ENST00000601809 IFIT2P09913 472 aaKnown RBP21.35■■□□□ 1.01
IRF3-230ENST00000601809 DCAF15Q66K64 600 aa21.35■■□□□ 1.01
IRF3-230ENST00000601809 SH3RF3Q8TEJ3 882 aaPredicted RBP21.35■■□□□ 1.01
IRF3-230ENST00000601809 MS4A4AQ96JQ5 239 aa21.35■■□□□ 1.01
IRF3-230ENST00000601809 WRNIP1Q96S55 665 aa21.35■■□□□ 1.01
IRF3-230ENST00000601809 CFHR5Q9BXR6 569 aa21.35■■□□□ 1.01
IRF3-230ENST00000601809 ZNF341Q9BYN7 854 aa21.35■■□□□ 1.01
IRF3-230ENST00000601809 CASP8AP2Q9UKL3 1982 aa21.35■■□□□ 1.01
IRF3-230ENST00000601809 MANSC4A6NHS7 340 aaPredicted RBP21.34■■□□□ 1.01
IRF3-230ENST00000601809 SPDYE5A6NIY4 337 aa21.34■■□□□ 1.01
IRF3-230ENST00000601809 PHF20L1A8MW92 1017 aa21.34■■□□□ 1.01
IRF3-230ENST00000601809 TRPA1O75762 1119 aa21.34■■□□□ 1.01
IRF3-230ENST00000601809 SLURP2P0DP57 97 aa21.34■■□□□ 1.01
IRF3-230ENST00000601809 ATP5JP18859 108 aa21.34■■□□□ 1.01
IRF3-230ENST00000601809 INPP5BP32019 993 aa21.34■■□□□ 1.01
IRF3-230ENST00000601809 ZKSCAN4Q969J2 545 aaPredicted RBP21.34■■□□□ 1.01
IRF3-230ENST00000601809 OPTNQ96CV9 577 aa21.34■■□□□ 1.01
IRF3-230ENST00000601809 SREBF2Q12772 1141 aa21.33■■□□□ 1.01
IRF3-230ENST00000601809 PICALMQ13492 652 aa21.33■■□□□ 1.01
IRF3-230ENST00000601809 NOL9Q5SY16 702 aaKnown RBP21.33■■□□□ 1.01
IRF3-230ENST00000601809 TMED8Q6PL24 325 aaPredicted RBP21.33■■□□□ 1.01
IRF3-230ENST00000601809 OSBPL5Q9H0X9 879 aaPredicted RBP21.33■■□□□ 1.01
IRF3-230ENST00000601809 AATFQ9NY61 560 aaKnown RBP eCLIP21.33■■□□□ 1.01
IRF3-230ENST00000601809 DDX60LQ5H9U9 1706 aaKnown RBP21.32■■□□□ 1
IRF3-230ENST00000601809 IGF2BP3O00425 579 aaKnown RBP eCLIP21.32■■□□□ 1
IRF3-230ENST00000601809 IDH1O75874 414 aaKnown RBP21.32■■□□□ 1
IRF3-230ENST00000601809 EDC3Q96F86 508 aaKnown RBP21.32■■□□□ 1
IRF3-230ENST00000601809 PTPN18Q99952 460 aa21.32■■□□□ 1
IRF3-230ENST00000601809 PHIPQ8WWQ0 1821 aa21.32■■□□□ 1
IRF3-230ENST00000601809 DOCK1Q14185 1865 aa21.31■■□□□ 1
IRF3-230ENST00000601809 CYP7A1P22680 504 aa21.31■■□□□ 1
IRF3-230ENST00000601809 INHBEP58166 350 aa21.31■■□□□ 1
IRF3-230ENST00000601809 DYNLL1P63167 89 aaKnown RBP21.31■■□□□ 1
IRF3-230ENST00000601809 ERO1BQ86YB8 467 aa21.31■■□□□ 1
IRF3-230ENST00000601809 IFNL1Q8IU54 200 aa21.31■■□□□ 1
IRF3-230ENST00000601809 TEX11Q8IYF3 940 aa21.31■■□□□ 1
IRF3-230ENST00000601809 MAGEB6Q8N7X4 407 aa21.31■■□□□ 1
IRF3-230ENST00000601809 HAUS7Q99871 368 aa21.31■■□□□ 1
IRF3-230ENST00000601809 CSADQ9Y600 493 aa21.31■■□□□ 1
IRF3-230ENST00000601809 MYH7P12883 1935 aa21.3■■□□□ 1
IRF3-230ENST00000601809 TCRBV5S4A2TA0A5A2 114 aa21.3■■□□□ 1
IRF3-230ENST00000601809 TBC1D12O60347 775 aa21.3■■□□□ 1
IRF3-230ENST00000601809 BAG3O95817 575 aa21.3■■□□□ 1
IRF3-230ENST00000601809 MAP3K12Q12852 859 aa21.3■■□□□ 1
IRF3-230ENST00000601809 TTF1Q15361 905 aaPredicted RBP21.3■■□□□ 1
IRF3-230ENST00000601809 R3HDMLQ9H3Y0 253 aa21.3■■□□□ 1
IRF3-230ENST00000601809 GOLIM4O00461 696 aa21.29■■□□□ 1
IRF3-230ENST00000601809 PLCG2P16885 1265 aa21.29■■□□□ 1
IRF3-230ENST00000601809 NOM1Q5C9Z4 860 aaKnown RBP21.29■■□□□ 1
IRF3-230ENST00000601809 TNS4Q8IZW8 715 aa21.29■■□□□ 1
IRF3-230ENST00000601809 RIOK1Q9BRS2 568 aaKnown RBP21.29■■□□□ 1
IRF3-230ENST00000601809 BOLA2Q9H3K6 86 aa21.29■■□□□ 1
IRF3-230ENST00000601809 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.29■■□□□ 1
IRF3-230ENST00000601809 FLT1P17948 1338 aa21.29■■□□□ 1
IRF3-230ENST00000601809 PDE6AP16499 860 aa21.28■■□□□ 1
IRF3-230ENST00000601809 PPIL2Q13356 520 aa21.28■■□□□ 1
IRF3-230ENST00000601809 HDAC1Q13547 482 aaPredicted RBP21.28■■□□□ 1
IRF3-230ENST00000601809 IFFO2Q5TF58 517 aa21.28■■□□□ 1
IRF3-230ENST00000601809 METTL16Q86W50 562 aaKnown RBP21.28■■□□□ 1
IRF3-230ENST00000601809 BRI3BPQ8WY22 251 aa21.28■■□□□ 1
IRF3-230ENST00000601809 OTUD5Q96G74 571 aa21.28■■□□□ 1
IRF3-230ENST00000601809 DNAJC2Q99543 621 aaKnown RBP21.28■■□□□ 1
IRF3-230ENST00000601809 PAG1Q9NWQ8 432 aa21.28■■□□□ 1
IRF3-230ENST00000601809 SALL3Q9BXA9 1300 aa21.28■■□□□ 1
IRF3-230ENST00000601809 MYH1P12882 1939 aa21.27■■□□□ 1
IRF3-230ENST00000601809 IRF6O14896 467 aa21.27■■□□□ 1
IRF3-230ENST00000601809 TBC1D8O95759 1140 aa21.27■■□□□ 1
IRF3-230ENST00000601809 PPATQ06203 517 aa21.27■■□□□ 1
IRF3-230ENST00000601809 AAMPQ13685 434 aa21.27■■□□□ 1
IRF3-230ENST00000601809 MIGA1Q8NAN2 632 aa21.27■■□□□ 1
IRF3-230ENST00000601809 TGFBRAP1Q8WUH2 860 aa21.27■■□□□ 1
IRF3-230ENST00000601809 PTPRFP10586 1907 aa21.27■■□□□ 1
IRF3-230ENST00000601809 ATAD5Q96QE3 1844 aa21.27■□□□□ 0.99
IRF3-230ENST00000601809 RRP1BQ14684 758 aaKnown RBP21.26■□□□□ 0.99
IRF3-230ENST00000601809 MAPKAPK5Q8IW41 473 aa21.26■□□□□ 0.99
IRF3-230ENST00000601809 ZSCAN29Q8IWY8 852 aaPredicted RBP21.26■□□□□ 0.99
IRF3-230ENST00000601809 NOL10Q9BSC4 688 aaKnown RBP21.26■□□□□ 0.99
IRF3-230ENST00000601809 ECHDC1Q9NTX5 307 aa21.26■□□□□ 0.99
IRF3-230ENST00000601809 KCNH4Q9UQ05 1017 aa21.26■□□□□ 0.99
IRF3-230ENST00000601809 ALDH1A1P00352 501 aa21.25■□□□□ 0.99
IRF3-230ENST00000601809 GTF2A2P52657 109 aa21.25■□□□□ 0.99
IRF3-230ENST00000601809 MOGSQ13724 837 aa21.25■□□□□ 0.99
IRF3-230ENST00000601809 SLC9C2Q5TAH2 1124 aa21.25■□□□□ 0.99
IRF3-230ENST00000601809 CERS3Q8IU89 383 aa21.25■□□□□ 0.99
IRF3-230ENST00000601809 DNAJC18Q9H819 358 aa21.25■□□□□ 0.99
IRF3-230ENST00000601809 ZNF532Q9HCE3 1301 aa21.25■□□□□ 0.99
IRF3-230ENST00000601809 FAM196BA6NMK8 535 aa21.24■□□□□ 0.99
IRF3-230ENST00000601809 CHGBP05060 677 aa21.24■□□□□ 0.99
IRF3-230ENST00000601809 ADD2P35612 726 aa21.24■□□□□ 0.99
IRF3-230ENST00000601809 SLFNL1Q499Z3 407 aa21.24■□□□□ 0.99
IRF3-230ENST00000601809 SCYL3Q8IZE3 742 aa21.24■□□□□ 0.99
IRF3-230ENST00000601809 EXOC6Q8TAG9 804 aa21.24■□□□□ 0.99
IRF3-230ENST00000601809 OTUD7AQ8TE49 926 aaPredicted RBP21.24■□□□□ 0.99
IRF3-230ENST00000601809 BCL11AQ9H165 835 aa21.24■□□□□ 0.99
IRF3-230ENST00000601809 DHX36Q9H2U1 1008 aaKnown RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms