RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 C17orf99Q6UX52 265 aa20.96■□□□□ 0.95
SCAF1-204ENST00000601038 NBPF11Q86T75 865 aa20.96■□□□□ 0.95
SCAF1-204ENST00000601038 PTCH2Q9Y6C5 1203 aa20.96■□□□□ 0.95
SCAF1-204ENST00000601038 DDTLA6NHG4 134 aaPredicted RBP20.95■□□□□ 0.94
SCAF1-204ENST00000601038 LDHCP07864 332 aa20.95■□□□□ 0.94
SCAF1-204ENST00000601038 MOGSQ13724 837 aa20.95■□□□□ 0.94
SCAF1-204ENST00000601038 SCYL3Q8IZE3 742 aa20.95■□□□□ 0.94
SCAF1-204ENST00000601038 ZNF384Q8TF68 577 aa20.95■□□□□ 0.94
SCAF1-204ENST00000601038 ARHGAP39Q9C0H5 1083 aa20.95■□□□□ 0.94
SCAF1-204ENST00000601038 DDX4Q9NQI0 724 aaKnown RBP20.95■□□□□ 0.94
SCAF1-204ENST00000601038 KIAA0100Q14667 2235 aaKnown RBP20.94■□□□□ 0.94
SCAF1-204ENST00000601038 NPM3O75607 178 aaKnown RBP20.94■□□□□ 0.94
SCAF1-204ENST00000601038 RHBDL3P58872 404 aa20.94■□□□□ 0.94
SCAF1-204ENST00000601038 GSTO1P78417 241 aa20.94■□□□□ 0.94
SCAF1-204ENST00000601038 POLA2Q14181 598 aa20.94■□□□□ 0.94
SCAF1-204ENST00000601038 SLC9C1Q4G0N8 1177 aa20.94■□□□□ 0.94
SCAF1-204ENST00000601038 PI16Q6UXB8 463 aa20.94■□□□□ 0.94
SCAF1-204ENST00000601038 TBC1D9Q6ZT07 1266 aa20.94■□□□□ 0.94
SCAF1-204ENST00000601038 ZNF333Q96JL9 665 aa20.94■□□□□ 0.94
SCAF1-204ENST00000601038 PICK1Q9NRD5 415 aa20.94■□□□□ 0.94
SCAF1-204ENST00000601038 MAP4K4O95819 1239 aaPredicted RBP20.93■□□□□ 0.94
SCAF1-204ENST00000601038 UQCRFS1P1P0C7P4 283 aa20.93■□□□□ 0.94
SCAF1-204ENST00000601038 PTPRAP18433 802 aa20.93■□□□□ 0.94
SCAF1-204ENST00000601038 ATP8B2P98198 1209 aa20.93■□□□□ 0.94
SCAF1-204ENST00000601038 HNRNPUQ00839 825 aaKnown RBP eCLIP20.93■□□□□ 0.94
SCAF1-204ENST00000601038 PICALMQ13492 652 aa20.93■□□□□ 0.94
SCAF1-204ENST00000601038 NSUN4Q96CB9 384 aaKnown RBP20.93■□□□□ 0.94
SCAF1-204ENST00000601038 TMEM106CQ9BVX2 250 aa20.93■□□□□ 0.94
SCAF1-204ENST00000601038 CPA4Q9UI42 421 aa20.93■□□□□ 0.94
SCAF1-204ENST00000601038 ZHX2Q9Y6X8 837 aa20.93■□□□□ 0.94
SCAF1-204ENST00000601038 DOCK2Q92608 1830 aa20.92■□□□□ 0.94
SCAF1-204ENST00000601038 CTNND1O60716 968 aaKnown RBP20.92■□□□□ 0.94
SCAF1-204ENST00000601038 MCAMP43121 646 aa20.92■□□□□ 0.94
SCAF1-204ENST00000601038 PRMT2P55345 433 aa20.92■□□□□ 0.94
SCAF1-204ENST00000601038 MIER1Q8N108 512 aa20.92■□□□□ 0.94
SCAF1-204ENST00000601038 SSH3Q8TE77 659 aa20.92■□□□□ 0.94
SCAF1-204ENST00000601038 GPR108Q9NPR9 543 aa20.92■□□□□ 0.94
SCAF1-204ENST00000601038 ADGRA2Q96PE1 1338 aa20.92■□□□□ 0.94
SCAF1-204ENST00000601038 HTTP42858 3142 aa20.92■□□□□ 0.94
SCAF1-204ENST00000601038 TBC1D12O60347 775 aa20.91■□□□□ 0.94
SCAF1-204ENST00000601038 GPAT2Q6NUI2 795 aa20.91■□□□□ 0.94
SCAF1-204ENST00000601038 FASTKD5Q7L8L6 764 aaKnown RBP20.91■□□□□ 0.94
SCAF1-204ENST00000601038 RBBP6Q7Z6E9 1792 aaKnown RBP20.91■□□□□ 0.94
SCAF1-204ENST00000601038 RAI14Q9P0K7 980 aa20.91■□□□□ 0.94
SCAF1-204ENST00000601038 AFG3L2Q9Y4W6 797 aa20.91■□□□□ 0.94
SCAF1-204ENST00000601038 A0A0G2JLL6 359 aaPredicted RBP20.9■□□□□ 0.94
SCAF1-204ENST00000601038 EN2P19622 333 aaPredicted RBP20.9■□□□□ 0.94
SCAF1-204ENST00000601038 PSMC4P43686 418 aa20.9■□□□□ 0.94
SCAF1-204ENST00000601038 PRRT2Q7Z6L0 340 aaPredicted RBP20.9■□□□□ 0.94
SCAF1-204ENST00000601038 PARK7Q99497 189 aaKnown RBP20.9■□□□□ 0.94
SCAF1-204ENST00000601038 LRP2BPQ9P2M1 347 aa20.9■□□□□ 0.94
SCAF1-204ENST00000601038 SLURP2P0DP57 97 aa20.89■□□□□ 0.93
SCAF1-204ENST00000601038 HOXD10P28358 340 aa20.89■□□□□ 0.93
SCAF1-204ENST00000601038 CTGFP29279 349 aa20.89■□□□□ 0.93
SCAF1-204ENST00000601038 TNNI3KQ59H18 835 aa20.89■□□□□ 0.93
SCAF1-204ENST00000601038 FTSJ3Q8IY81 847 aaKnown RBP20.89■□□□□ 0.93
SCAF1-204ENST00000601038 FPGT-TNNI3KV9GXZ4 949 aa20.89■□□□□ 0.93
SCAF1-204ENST00000601038 ZBTB7BO15156 539 aaPredicted RBP20.88■□□□□ 0.93
SCAF1-204ENST00000601038 SURF6O75683 361 aaKnown RBP20.88■□□□□ 0.93
SCAF1-204ENST00000601038 OS9Q13438 667 aaPredicted RBP20.88■□□□□ 0.93
SCAF1-204ENST00000601038 CCDC158Q5M9N0 1113 aa20.88■□□□□ 0.93
SCAF1-204ENST00000601038 TRIM47Q96LD4 638 aa20.88■□□□□ 0.93
SCAF1-204ENST00000601038 SRRDQ9UH36 339 aa20.88■□□□□ 0.93
SCAF1-204ENST00000601038 ZSWIM8A7E2V4 1837 aa20.88■□□□□ 0.93
SCAF1-204ENST00000601038 CYP2C8P10632 490 aa20.87■□□□□ 0.93
SCAF1-204ENST00000601038 BCRP11274 1271 aa20.87■□□□□ 0.93
SCAF1-204ENST00000601038 SLC4A8Q2Y0W8 1093 aa20.87■□□□□ 0.93
SCAF1-204ENST00000601038 TTC39AQ5SRH9 613 aa20.87■□□□□ 0.93
SCAF1-204ENST00000601038 ITPRIPQ8IWB1 547 aa20.87■□□□□ 0.93
SCAF1-204ENST00000601038 SH3TC2Q8TF17 1288 aa20.87■□□□□ 0.93
SCAF1-204ENST00000601038 DBNDD2Q9BQY9 259 aa20.87■□□□□ 0.93
SCAF1-204ENST00000601038 OSBPL5Q9H0X9 879 aaPredicted RBP20.87■□□□□ 0.93
SCAF1-204ENST00000601038 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.87■□□□□ 0.934e-10■■■■■ 51
SCAF1-204ENST00000601038 SLC45A1Q9Y2W3 748 aa20.87■□□□□ 0.93
SCAF1-204ENST00000601038 NOP58Q9Y2X3 529 aaKnown RBP20.87■□□□□ 0.93
SCAF1-204ENST00000601038 ECM2O94769 699 aaPredicted RBP20.86■□□□□ 0.93
SCAF1-204ENST00000601038 FMNL1O95466 1100 aaPredicted RBP20.86■□□□□ 0.93
SCAF1-204ENST00000601038 RLBP1P12271 317 aa20.86■□□□□ 0.93
SCAF1-204ENST00000601038 DIEXFQ68CQ4 756 aaKnown RBP20.86■□□□□ 0.93
SCAF1-204ENST00000601038 ZNF512BQ96KM6 892 aaPredicted RBP20.86■□□□□ 0.93
SCAF1-204ENST00000601038 NOL10Q9BSC4 688 aaKnown RBP20.86■□□□□ 0.93
SCAF1-204ENST00000601038 C1orf115Q9H7X2 142 aa20.86■□□□□ 0.93
SCAF1-204ENST00000601038 SNRKQ9NRH2 765 aa20.86■□□□□ 0.93
SCAF1-204ENST00000601038 COL2A1P02458 1487 aaPredicted RBP20.86■□□□□ 0.93
SCAF1-204ENST00000601038 IGSF3O75054 1194 aa20.85■□□□□ 0.93
SCAF1-204ENST00000601038 OSBPP22059 807 aa20.85■□□□□ 0.93
SCAF1-204ENST00000601038 NAA16Q6N069 864 aaPredicted RBP20.85■□□□□ 0.93
SCAF1-204ENST00000601038 GADL1Q6ZQY3 521 aa20.85■□□□□ 0.93
SCAF1-204ENST00000601038 TEX11Q8IYF3 940 aa20.85■□□□□ 0.93
SCAF1-204ENST00000601038 DOCK1Q14185 1865 aa20.85■□□□□ 0.93
SCAF1-204ENST00000601038 TRIM75PA6NK02 468 aa20.84■□□□□ 0.93
SCAF1-204ENST00000601038 FAM196BA6NMK8 535 aa20.84■□□□□ 0.93
SCAF1-204ENST00000601038 BAG3O95817 575 aa20.84■□□□□ 0.93
SCAF1-204ENST00000601038 PLCG2P16885 1265 aa20.84■□□□□ 0.93
SCAF1-204ENST00000601038 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.84■□□□□ 0.93
SCAF1-204ENST00000601038 CENPFP49454 3210 aa20.83■□□□□ 0.93
SCAF1-204ENST00000601038 MYCP01106 439 aaPredicted RBP20.83■□□□□ 0.93
SCAF1-204ENST00000601038 CYP2E1P05181 493 aaPredicted RBP20.83■□□□□ 0.93
SCAF1-204ENST00000601038 FCGRTP55899 365 aa20.83■□□□□ 0.93
SCAF1-204ENST00000601038 PPP4CP60510 307 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 312.3 ms