RNA–Protein interactions for RNA: ENST00000600940.1

USP29-204, Transcript of ubiquitin specific peptidase 29, humanhuman

TSL 4

Gene USP29, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP29-204ENST00000600940 ZFPM1Q8IX07 1006 aa17.15■□□□□ 0.34
USP29-204ENST00000600940 SH3TC2Q8TF17 1288 aa17.15■□□□□ 0.34
USP29-204ENST00000600940 ARHGAP45Q92619 1136 aa17.15■□□□□ 0.34
USP29-204ENST00000600940 GCC1Q96CN9 775 aa17.15■□□□□ 0.34
USP29-204ENST00000600940 XAGE2Q96GT9 111 aa17.15■□□□□ 0.34
USP29-204ENST00000600940 ZNF333Q96JL9 665 aa17.15■□□□□ 0.34
USP29-204ENST00000600940 ZNF112Q9UJU3 913 aa17.15■□□□□ 0.34
USP29-204ENST00000600940 MKI67P46013 3256 aaKnown RBP17.14■□□□□ 0.33
USP29-204ENST00000600940 ENTPD3O75355 529 aa17.14■□□□□ 0.33
USP29-204ENST00000600940 HOXD10P28358 340 aa17.14■□□□□ 0.33
USP29-204ENST00000600940 BTDP43251 543 aa17.13■□□□□ 0.33
USP29-204ENST00000600940 PSMC4P43686 418 aa17.13■□□□□ 0.33
USP29-204ENST00000600940 PRMT2P55345 433 aa17.13■□□□□ 0.33
USP29-204ENST00000600940 G3BP1Q13283 466 aaKnown RBP eCLIP17.13■□□□□ 0.33
USP29-204ENST00000600940 NOL9Q5SY16 702 aaKnown RBP17.13■□□□□ 0.33
USP29-204ENST00000600940 RAET1EQ8TD07 263 aa17.13■□□□□ 0.33
USP29-204ENST00000600940 PARK7Q99497 189 aaKnown RBP17.13■□□□□ 0.33
USP29-204ENST00000600940 KCNH4Q9UQ05 1017 aa17.13■□□□□ 0.33
USP29-204ENST00000600940 ZHX2Q9Y6X8 837 aa17.13■□□□□ 0.33
USP29-204ENST00000600940 GNAI2P04899 355 aa17.12■□□□□ 0.33
USP29-204ENST00000600940 C17orf99Q6UX52 265 aa17.12■□□□□ 0.33
USP29-204ENST00000600940 GADL1Q6ZQY3 521 aa17.12■□□□□ 0.33
USP29-204ENST00000600940 SCYL3Q8IZE3 742 aa17.12■□□□□ 0.33
USP29-204ENST00000600940 CLUAP1Q96AJ1 413 aa17.12■□□□□ 0.33
USP29-204ENST00000600940 IDI2Q9BXS1 227 aa17.12■□□□□ 0.33
USP29-204ENST00000600940 BIN2Q9UBW5 565 aaPredicted RBP17.12■□□□□ 0.33
USP29-204ENST00000600940 RBBP6Q7Z6E9 1792 aaKnown RBP17.12■□□□□ 0.33
USP29-204ENST00000600940 CXCL11O14625 94 aa17.11■□□□□ 0.33
USP29-204ENST00000600940 GSTO1P78417 241 aa17.11■□□□□ 0.33
USP29-204ENST00000600940 FASTKD5Q7L8L6 764 aaKnown RBP17.11■□□□□ 0.33
USP29-204ENST00000600940 RAI14Q9P0K7 980 aa17.11■□□□□ 0.33
USP29-204ENST00000600940 ZSWIM8A7E2V4 1837 aa17.11■□□□□ 0.33
USP29-204ENST00000600940 DOCK2Q92608 1830 aa17.11■□□□□ 0.33
USP29-204ENST00000600940 GAKO14976 1311 aa17.11■□□□□ 0.33
USP29-204ENST00000600940 BRCA2P51587 3418 aa17.1■□□□□ 0.33
USP29-204ENST00000600940 LDHCP07864 332 aa17.1■□□□□ 0.33
USP29-204ENST00000600940 CYP2C8P10632 490 aa17.1■□□□□ 0.33
USP29-204ENST00000600940 MECOMQ03112 1051 aa17.1■□□□□ 0.33
USP29-204ENST00000600940 OS9Q13438 667 aaPredicted RBP17.1■□□□□ 0.33
USP29-204ENST00000600940 ATF7IPQ6VMQ6 1270 aa17.1■□□□□ 0.33
USP29-204ENST00000600940 SPATA5Q8NB90 893 aa17.1■□□□□ 0.33
USP29-204ENST00000600940 NOL10Q9BSC4 688 aaKnown RBP17.1■□□□□ 0.33
USP29-204ENST00000600940 MROH7-TTC4A0A0A0MT08 1334 aa17.1■□□□□ 0.33
USP29-204ENST00000600940 PDS5AQ29RF7 1337 aaKnown RBP17.1■□□□□ 0.33
USP29-204ENST00000600940 DDTLA6NHG4 134 aaPredicted RBP17.09■□□□□ 0.33
USP29-204ENST00000600940 BCAR3O75815 825 aa17.09■□□□□ 0.33
USP29-204ENST00000600940 TRIM27P14373 513 aa17.09■□□□□ 0.33
USP29-204ENST00000600940 PTPRAP18433 802 aa17.09■□□□□ 0.33
USP29-204ENST00000600940 FCGRTP55899 365 aa17.09■□□□□ 0.33
USP29-204ENST00000600940 FAM163AQ96GL9 167 aaPredicted RBP17.09■□□□□ 0.33
USP29-204ENST00000600940 TRIM47Q96LD4 638 aa17.09■□□□□ 0.33
USP29-204ENST00000600940 PCDH10Q9P2E7 1040 aa17.09■□□□□ 0.33
USP29-204ENST00000600940 LRP2BPQ9P2M1 347 aa17.09■□□□□ 0.33
USP29-204ENST00000600940 SRRDQ9UH36 339 aa17.09■□□□□ 0.33
USP29-204ENST00000600940 MYPNQ86TC9 1320 aa17.09■□□□□ 0.33
USP29-204ENST00000600940 TRIM75PA6NK02 468 aa17.08■□□□□ 0.32
USP29-204ENST00000600940 PHF20L1A8MW92 1017 aa17.08■□□□□ 0.32
USP29-204ENST00000600940 CTNND1O60716 968 aaKnown RBP17.08■□□□□ 0.32
USP29-204ENST00000600940 OSBPP22059 807 aa17.08■□□□□ 0.32
USP29-204ENST00000600940 MTX1Q13505 466 aa17.08■□□□□ 0.32
USP29-204ENST00000600940 TBC1D9Q6ZT07 1266 aa17.08■□□□□ 0.32
USP29-204ENST00000600940 SH3BP5LQ7L8J4 393 aa17.08■□□□□ 0.32
USP29-204ENST00000600940 SMCR8Q8TEV9 937 aaPredicted RBP17.08■□□□□ 0.32
USP29-204ENST00000600940 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.08■□□□□ 0.32
USP29-204ENST00000600940 DDX4Q9NQI0 724 aaKnown RBP17.08■□□□□ 0.32
USP29-204ENST00000600940 HMG20BQ9P0W2 317 aa17.08■□□□□ 0.32
USP29-204ENST00000600940 GPR75-ASB3A0A0A6YYF3 556 aa17.07■□□□□ 0.32
USP29-204ENST00000600940 UQCRFS1P1P0C7P4 283 aa17.07■□□□□ 0.32
USP29-204ENST00000600940 GRK4P32298 578 aa17.07■□□□□ 0.32
USP29-204ENST00000600940 PI16Q6UXB8 463 aa17.07■□□□□ 0.32
USP29-204ENST00000600940 TNNQ9UQP3 1299 aa17.07■□□□□ 0.32
USP29-204ENST00000600940 AFG3L2Q9Y4W6 797 aa17.07■□□□□ 0.32
USP29-204ENST00000600940 A0A0G2JLL6 359 aaPredicted RBP17.06■□□□□ 0.32
USP29-204ENST00000600940 PNMA6EA0A0J9YXQ4 647 aa17.06■□□□□ 0.32
USP29-204ENST00000600940 MOGSQ13724 837 aa17.06■□□□□ 0.32
USP29-204ENST00000600940 TTC39AQ5SRH9 613 aa17.06■□□□□ 0.32
USP29-204ENST00000600940 ZKSCAN2Q63HK3 967 aa17.06■□□□□ 0.32
USP29-204ENST00000600940 GPAT2Q6NUI2 795 aa17.06■□□□□ 0.32
USP29-204ENST00000600940 PRRT2Q7Z6L0 340 aaPredicted RBP17.06■□□□□ 0.32
USP29-204ENST00000600940 FAM196BA6NMK8 535 aa17.05■□□□□ 0.32
USP29-204ENST00000600940 SLURP2P0DP57 97 aa17.05■□□□□ 0.32
USP29-204ENST00000600940 CTGFP29279 349 aa17.05■□□□□ 0.32
USP29-204ENST00000600940 UBXN2AP68543 259 aa17.05■□□□□ 0.32
USP29-204ENST00000600940 MTFR1Q15390 333 aa17.05■□□□□ 0.32
USP29-204ENST00000600940 CCDC158Q5M9N0 1113 aa17.05■□□□□ 0.32
USP29-204ENST00000600940 FTSJ3Q8IY81 847 aaKnown RBP17.05■□□□□ 0.32
USP29-204ENST00000600940 TEX11Q8IYF3 940 aa17.05■□□□□ 0.32
USP29-204ENST00000600940 NSUN4Q96CB9 384 aaKnown RBP17.05■□□□□ 0.32
USP29-204ENST00000600940 TAOK2Q9UL54 1235 aa17.05■□□□□ 0.32
USP29-204ENST00000600940 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.05■□□□□ 0.32
USP29-204ENST00000600940 ATRNL1Q5VV63 1379 aa17.04■□□□□ 0.32
USP29-204ENST00000600940 ADGRA2Q96PE1 1338 aa17.04■□□□□ 0.32
USP29-204ENST00000600940 DOCK1Q14185 1865 aa17.04■□□□□ 0.32
USP29-204ENST00000600940 ARID4AP29374 1257 aaPredicted RBP17.04■□□□□ 0.32
USP29-204ENST00000600940 RHBDL3P58872 404 aa17.04■□□□□ 0.32
USP29-204ENST00000600940 PRKCZQ05513 592 aa17.04■□□□□ 0.32
USP29-204ENST00000600940 HABP4Q5JVS0 413 aaKnown RBP17.04■□□□□ 0.32
USP29-204ENST00000600940 CCDC84Q86UT8 332 aaPredicted RBP17.04■□□□□ 0.32
USP29-204ENST00000600940 TMEM57Q8N5G2 664 aa17.04■□□□□ 0.32
USP29-204ENST00000600940 NKX2-3Q8TAU0 364 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms