RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 TMOD2Q9NZR1 351 aa10.74□□□□□ -0.69
SSBP4-208ENST00000600628 NDUFB9Q9Y6M9 179 aa10.74□□□□□ -0.69
SSBP4-208ENST00000600628 DDTLA6NHG4 134 aaPredicted RBP10.73□□□□□ -0.69
SSBP4-208ENST00000600628 SMARCA5O60264 1052 aaPredicted RBP10.73□□□□□ -0.69
SSBP4-208ENST00000600628 TBC1D12O60347 775 aa10.73□□□□□ -0.69
SSBP4-208ENST00000600628 IREB2P48200 963 aaKnown RBP10.73□□□□□ -0.69
SSBP4-208ENST00000600628 RGS3P49796 1198 aa10.73□□□□□ -0.69
SSBP4-208ENST00000600628 NAA16Q6N069 864 aaPredicted RBP10.73□□□□□ -0.69
SSBP4-208ENST00000600628 WNK4Q96J92 1243 aa10.73□□□□□ -0.69
SSBP4-208ENST00000600628 MS4A4AQ96JQ5 239 aa10.73□□□□□ -0.69
SSBP4-208ENST00000600628 RIOK1Q9BRS2 568 aaKnown RBP10.73□□□□□ -0.69
SSBP4-208ENST00000600628 LRP2BPQ9P2M1 347 aa10.73□□□□□ -0.69
SSBP4-208ENST00000600628 TSKSQ9UJT2 592 aa10.73□□□□□ -0.69
SSBP4-208ENST00000600628 MYH1P12882 1939 aa10.73□□□□□ -0.69
SSBP4-208ENST00000600628 CASP8AP2Q9UKL3 1982 aa10.73□□□□□ -0.69
SSBP4-208ENST00000600628 BRCA2P51587 3418 aa10.72□□□□□ -0.69
SSBP4-208ENST00000600628 IFIT2P09913 472 aaKnown RBP10.72□□□□□ -0.69
SSBP4-208ENST00000600628 MAP3K9P80192 1104 aa10.72□□□□□ -0.69
SSBP4-208ENST00000600628 VGLL4Q14135 290 aa10.72□□□□□ -0.69
SSBP4-208ENST00000600628 NOM1Q5C9Z4 860 aaKnown RBP10.72□□□□□ -0.69
SSBP4-208ENST00000600628 NOL9Q5SY16 702 aaKnown RBP10.72□□□□□ -0.69
SSBP4-208ENST00000600628 SMC5Q8IY18 1101 aa10.72□□□□□ -0.69
SSBP4-208ENST00000600628 HOOK2Q96ED9 719 aa10.72□□□□□ -0.69
SSBP4-208ENST00000600628 SLC10A4Q96EP9 437 aa10.72□□□□□ -0.69
SSBP4-208ENST00000600628 RNF186Q9NXI6 227 aa10.72□□□□□ -0.69
SSBP4-208ENST00000600628 RAI14Q9P0K7 980 aa10.72□□□□□ -0.69
SSBP4-208ENST00000600628 SNCAIPQ9Y6H5 919 aa10.72□□□□□ -0.69
SSBP4-208ENST00000600628 DOCK1Q14185 1865 aa10.72□□□□□ -0.69
SSBP4-208ENST00000600628 SPDYE5A6NIY4 337 aa10.71□□□□□ -0.69
SSBP4-208ENST00000600628 PLCG2P16885 1265 aa10.71□□□□□ -0.69
SSBP4-208ENST00000600628 TCP10Q12799 353 aa10.71□□□□□ -0.69
SSBP4-208ENST00000600628 TTF1Q15361 905 aaPredicted RBP10.71□□□□□ -0.69
SSBP4-208ENST00000600628 CERS3Q8IU89 383 aa10.71□□□□□ -0.69
SSBP4-208ENST00000600628 SH3RF3Q8TEJ3 882 aaPredicted RBP10.71□□□□□ -0.69
SSBP4-208ENST00000600628 ATAD5Q96QE3 1844 aa10.71□□□□□ -0.69
SSBP4-208ENST00000600628 OSBPL5Q9H0X9 879 aaPredicted RBP10.71□□□□□ -0.69
SSBP4-208ENST00000600628 APBB1O00213 710 aa10.7□□□□□ -0.7
SSBP4-208ENST00000600628 TRPA1O75762 1119 aa10.7□□□□□ -0.7
SSBP4-208ENST00000600628 PDE6AP16499 860 aa10.7□□□□□ -0.7
SSBP4-208ENST00000600628 INHBEP58166 350 aa10.7□□□□□ -0.7
SSBP4-208ENST00000600628 MAP3K12Q12852 859 aa10.7□□□□□ -0.7
SSBP4-208ENST00000600628 MKRN3Q13064 507 aaKnown RBP10.7□□□□□ -0.7
SSBP4-208ENST00000600628 DCAF15Q66K64 600 aa10.7□□□□□ -0.7
SSBP4-208ENST00000600628 EXOC6Q8TAG9 804 aa10.7□□□□□ -0.7
SSBP4-208ENST00000600628 PI4K2BQ8TCG2 481 aa10.7□□□□□ -0.7
SSBP4-208ENST00000600628 GCC1Q96CN9 775 aa10.7□□□□□ -0.7
SSBP4-208ENST00000600628 EDC3Q96F86 508 aaKnown RBP10.7□□□□□ -0.7
SSBP4-208ENST00000600628 PTPN18Q99952 460 aa10.7□□□□□ -0.7
SSBP4-208ENST00000600628 ZNF341Q9BYN7 854 aa10.7□□□□□ -0.7
SSBP4-208ENST00000600628 ECHDC1Q9NTX5 307 aa10.7□□□□□ -0.7
SSBP4-208ENST00000600628 STAP2Q9UGK3 403 aa10.7□□□□□ -0.7
SSBP4-208ENST00000600628 KCNH4Q9UQ05 1017 aa10.7□□□□□ -0.7
SSBP4-208ENST00000600628 FLT1P17948 1338 aa10.69□□□□□ -0.7
SSBP4-208ENST00000600628 TTC41PQ6P2S7 1318 aa10.69□□□□□ -0.7
SSBP4-208ENST00000600628 MANSC4A6NHS7 340 aaPredicted RBP10.69□□□□□ -0.7
SSBP4-208ENST00000600628 IGF2BP3O00425 579 aaKnown RBP eCLIP10.69□□□□□ -0.7
SSBP4-208ENST00000600628 IDH1O75874 414 aaKnown RBP10.69□□□□□ -0.7
SSBP4-208ENST00000600628 BAG3O95817 575 aa10.69□□□□□ -0.7
SSBP4-208ENST00000600628 SLURP2P0DP57 97 aa10.69□□□□□ -0.7
SSBP4-208ENST00000600628 CYP7A1P22680 504 aa10.69□□□□□ -0.7
SSBP4-208ENST00000600628 INPP5BP32019 993 aa10.69□□□□□ -0.7
SSBP4-208ENST00000600628 MOGSQ13724 837 aa10.69□□□□□ -0.7
SSBP4-208ENST00000600628 MIGA2Q7L4E1 593 aa10.69□□□□□ -0.7
SSBP4-208ENST00000600628 ERO1BQ86YB8 467 aa10.69□□□□□ -0.7
SSBP4-208ENST00000600628 MAGEB6Q8N7X4 407 aa10.69□□□□□ -0.7
SSBP4-208ENST00000600628 OTUD7AQ8TE49 926 aaPredicted RBP10.69□□□□□ -0.7
SSBP4-208ENST00000600628 CNKSR2Q8WXI2 1034 aa10.69□□□□□ -0.7
SSBP4-208ENST00000600628 ZKSCAN4Q969J2 545 aaPredicted RBP10.69□□□□□ -0.7
SSBP4-208ENST00000600628 OPTNQ96CV9 577 aa10.69□□□□□ -0.7
SSBP4-208ENST00000600628 WRNIP1Q96S55 665 aa10.69□□□□□ -0.7
SSBP4-208ENST00000600628 DNAJC18Q9H819 358 aa10.69□□□□□ -0.7
SSBP4-208ENST00000600628 PAG1Q9NWQ8 432 aa10.69□□□□□ -0.7
SSBP4-208ENST00000600628 AATFQ9NY61 560 aaKnown RBP eCLIP10.69□□□□□ -0.7
SSBP4-208ENST00000600628 SUPT16HQ9Y5B9 1047 aaKnown RBP10.69□□□□□ -0.7
SSBP4-208ENST00000600628 NAV1Q8NEY1 1877 aa10.68□□□□□ -0.7
SSBP4-208ENST00000600628 GOLIM4O00461 696 aa10.68□□□□□ -0.7
SSBP4-208ENST00000600628 CTNND1O60716 968 aaKnown RBP10.68□□□□□ -0.7
SSBP4-208ENST00000600628 IGHDP01880 384 aa10.68□□□□□ -0.7
SSBP4-208ENST00000600628 ADD2P35612 726 aa10.68□□□□□ -0.7
SSBP4-208ENST00000600628 DYNLL1P63167 89 aaKnown RBP10.68□□□□□ -0.7
SSBP4-208ENST00000600628 PPATQ06203 517 aa10.68□□□□□ -0.7
SSBP4-208ENST00000600628 SREBF2Q12772 1141 aa10.68□□□□□ -0.7
SSBP4-208ENST00000600628 PPIL2Q13356 520 aa10.68□□□□□ -0.7
SSBP4-208ENST00000600628 UBE3CQ15386 1083 aa10.68□□□□□ -0.7
SSBP4-208ENST00000600628 SLC9C2Q5TAH2 1124 aa10.68□□□□□ -0.7
SSBP4-208ENST00000600628 IFNL1Q8IU54 200 aa10.68□□□□□ -0.7
SSBP4-208ENST00000600628 TEX11Q8IYF3 940 aa10.68□□□□□ -0.7
SSBP4-208ENST00000600628 DHX36Q9H2U1 1008 aaKnown RBP10.68□□□□□ -0.7
SSBP4-208ENST00000600628 BOLA2Q9H3K6 86 aa10.68□□□□□ -0.7
SSBP4-208ENST00000600628 ELP3Q9H9T3 547 aa10.68□□□□□ -0.7
SSBP4-208ENST00000600628 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.68□□□□□ -0.7
SSBP4-208ENST00000600628 ZNF532Q9HCE3 1301 aa10.67□□□□□ -0.7
SSBP4-208ENST00000600628 BAZ2AQ9UIF9 1905 aaKnown RBP10.67□□□□□ -0.7
SSBP4-208ENST00000600628 IRF6O14896 467 aa10.67□□□□□ -0.7
SSBP4-208ENST00000600628 RRP1BQ14684 758 aaKnown RBP10.67□□□□□ -0.7
SSBP4-208ENST00000600628 KBTBD3Q8NAB2 608 aa10.67□□□□□ -0.7
SSBP4-208ENST00000600628 TGFBRAP1Q8WUH2 860 aa10.67□□□□□ -0.7
SSBP4-208ENST00000600628 BRI3BPQ8WY22 251 aa10.67□□□□□ -0.7
SSBP4-208ENST00000600628 R3HDMLQ9H3Y0 253 aa10.67□□□□□ -0.7
SSBP4-208ENST00000600628 ZCCHC17Q9NP64 241 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms