RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-222ENST00000600517 MAP3K12Q12852 859 aa16.41■□□□□ 0.22
ARHGEF1-222ENST00000600517 PICALMQ13492 652 aa16.41■□□□□ 0.22
ARHGEF1-222ENST00000600517 TTF1Q15361 905 aaPredicted RBP16.41■□□□□ 0.22
ARHGEF1-222ENST00000600517 ADGRA1Q86SQ6 560 aa16.41■□□□□ 0.22
ARHGEF1-222ENST00000600517 WRNIP1Q96S55 665 aa16.41■□□□□ 0.22
ARHGEF1-222ENST00000600517 NOL10Q9BSC4 688 aaKnown RBP16.41■□□□□ 0.22
ARHGEF1-222ENST00000600517 BCL11AQ9H165 835 aa16.41■□□□□ 0.22
ARHGEF1-222ENST00000600517 MYH2Q9UKX2 1941 aa16.41■□□□□ 0.22
ARHGEF1-222ENST00000600517 DDTLA6NHG4 134 aaPredicted RBP16.4■□□□□ 0.22
ARHGEF1-222ENST00000600517 SMARCA5O60264 1052 aaPredicted RBP16.4■□□□□ 0.22
ARHGEF1-222ENST00000600517 PLCG2P16885 1265 aa16.4■□□□□ 0.22
ARHGEF1-222ENST00000600517 CYP7A1P22680 504 aa16.4■□□□□ 0.22
ARHGEF1-222ENST00000600517 AAMPQ13685 434 aa16.4■□□□□ 0.22
ARHGEF1-222ENST00000600517 ZSCAN29Q8IWY8 852 aaPredicted RBP16.4■□□□□ 0.22
ARHGEF1-222ENST00000600517 TEX11Q8IYF3 940 aa16.4■□□□□ 0.22
ARHGEF1-222ENST00000600517 SH3RF3Q8TEJ3 882 aaPredicted RBP16.4■□□□□ 0.22
ARHGEF1-222ENST00000600517 ZKSCAN4Q969J2 545 aaPredicted RBP16.4■□□□□ 0.22
ARHGEF1-222ENST00000600517 OPTNQ96CV9 577 aa16.4■□□□□ 0.22
ARHGEF1-222ENST00000600517 AATFQ9NY61 560 aaKnown RBP eCLIP16.4■□□□□ 0.22
ARHGEF1-222ENST00000600517 ATRNL1Q5VV63 1379 aa16.39■□□□□ 0.21
ARHGEF1-222ENST00000600517 SPDYE5A6NIY4 337 aa16.39■□□□□ 0.21
ARHGEF1-222ENST00000600517 ERO1BQ86YB8 467 aa16.39■□□□□ 0.21
ARHGEF1-222ENST00000600517 SNCAIPQ9Y6H5 919 aa16.39■□□□□ 0.21
ARHGEF1-222ENST00000600517 TESPA1A2RU30 521 aaPredicted RBP16.38■□□□□ 0.21
ARHGEF1-222ENST00000600517 PHF20L1A8MW92 1017 aa16.38■□□□□ 0.21
ARHGEF1-222ENST00000600517 GOLIM4O00461 696 aa16.38■□□□□ 0.21
ARHGEF1-222ENST00000600517 INPP5BP32019 993 aa16.38■□□□□ 0.21
ARHGEF1-222ENST00000600517 TNS4Q8IZW8 715 aa16.38■□□□□ 0.21
ARHGEF1-222ENST00000600517 MAGEB6Q8N7X4 407 aa16.38■□□□□ 0.21
ARHGEF1-222ENST00000600517 CNKSR2Q8WXI2 1034 aa16.38■□□□□ 0.21
ARHGEF1-222ENST00000600517 DNAJC2Q99543 621 aaKnown RBP16.38■□□□□ 0.21
ARHGEF1-222ENST00000600517 HAUS7Q99871 368 aa16.38■□□□□ 0.21
ARHGEF1-222ENST00000600517 OSBPL5Q9H0X9 879 aaPredicted RBP16.38■□□□□ 0.21
ARHGEF1-222ENST00000600517 BOLA2Q9H3K6 86 aa16.38■□□□□ 0.21
ARHGEF1-222ENST00000600517 TBC1D12O60347 775 aa16.37■□□□□ 0.21
ARHGEF1-222ENST00000600517 ALDH1A1P00352 501 aa16.37■□□□□ 0.21
ARHGEF1-222ENST00000600517 DYNLL1P63167 89 aaKnown RBP16.37■□□□□ 0.21
ARHGEF1-222ENST00000600517 IFNL1Q8IU54 200 aa16.37■□□□□ 0.21
ARHGEF1-222ENST00000600517 CERS3Q8IU89 383 aa16.37■□□□□ 0.21
ARHGEF1-222ENST00000600517 MS4A4AQ96JQ5 239 aa16.37■□□□□ 0.21
ARHGEF1-222ENST00000600517 CFHR5Q9BXR6 569 aa16.37■□□□□ 0.21
ARHGEF1-222ENST00000600517 ECHDC1Q9NTX5 307 aa16.37■□□□□ 0.21
ARHGEF1-222ENST00000600517 PAG1Q9NWQ8 432 aa16.37■□□□□ 0.21
ARHGEF1-222ENST00000600517 COL2A1P02458 1487 aaPredicted RBP16.36■□□□□ 0.21
ARHGEF1-222ENST00000600517 GTF2A2P52657 109 aa16.36■□□□□ 0.21
ARHGEF1-222ENST00000600517 PPATQ06203 517 aa16.36■□□□□ 0.21
ARHGEF1-222ENST00000600517 HDAC1Q13547 482 aaPredicted RBP16.36■□□□□ 0.21
ARHGEF1-222ENST00000600517 NOL9Q5SY16 702 aaKnown RBP16.36■□□□□ 0.21
ARHGEF1-222ENST00000600517 SLC9C2Q5TAH2 1124 aa16.36■□□□□ 0.21
ARHGEF1-222ENST00000600517 EDC3Q96F86 508 aaKnown RBP16.36■□□□□ 0.21
ARHGEF1-222ENST00000600517 OTUD5Q96G74 571 aa16.36■□□□□ 0.21
ARHGEF1-222ENST00000600517 SUPT16HQ9Y5B9 1047 aaKnown RBP16.36■□□□□ 0.21
ARHGEF1-222ENST00000600517 IGF2BP3O00425 579 aaKnown RBP eCLIP16.35■□□□□ 0.21
ARHGEF1-222ENST00000600517 TBC1D8O95759 1140 aa16.35■□□□□ 0.21
ARHGEF1-222ENST00000600517 PDE6AP16499 860 aa16.35■□□□□ 0.21
ARHGEF1-222ENST00000600517 PPIL2Q13356 520 aa16.35■□□□□ 0.21
ARHGEF1-222ENST00000600517 MAPKAPK5Q8IW41 473 aa16.35■□□□□ 0.21
ARHGEF1-222ENST00000600517 MIGA1Q8NAN2 632 aa16.35■□□□□ 0.21
ARHGEF1-222ENST00000600517 TGFBRAP1Q8WUH2 860 aa16.35■□□□□ 0.21
ARHGEF1-222ENST00000600517 PTPN18Q99952 460 aa16.35■□□□□ 0.21
ARHGEF1-222ENST00000600517 DHX36Q9H2U1 1008 aaKnown RBP16.35■□□□□ 0.21
ARHGEF1-222ENST00000600517 SLURP2P0DP57 97 aa16.34■□□□□ 0.21
ARHGEF1-222ENST00000600517 NOM1Q5C9Z4 860 aaKnown RBP16.34■□□□□ 0.21
ARHGEF1-222ENST00000600517 OTUD7BQ6GQQ9 843 aa16.34■□□□□ 0.21
ARHGEF1-222ENST00000600517 BRI3BPQ8WY22 251 aa16.34■□□□□ 0.21
ARHGEF1-222ENST00000600517 RIOK1Q9BRS2 568 aaKnown RBP16.34■□□□□ 0.21
ARHGEF1-222ENST00000600517 PI4KBQ9UBF8 816 aa16.34■□□□□ 0.21
ARHGEF1-222ENST00000600517 FLT1P17948 1338 aa16.34■□□□□ 0.21
ARHGEF1-222ENST00000600517 CCL15-CCL14A0A0B4J2E2 113 aa16.33■□□□□ 0.2
ARHGEF1-222ENST00000600517 TCRBV5S4A2TA0A5A2 114 aa16.33■□□□□ 0.2
ARHGEF1-222ENST00000600517 IRF6O14896 467 aa16.33■□□□□ 0.2
ARHGEF1-222ENST00000600517 CTNND1O60716 968 aaKnown RBP16.33■□□□□ 0.2
ARHGEF1-222ENST00000600517 CETPP11597 493 aa16.33■□□□□ 0.2
ARHGEF1-222ENST00000600517 CCL15Q16663 113 aa16.33■□□□□ 0.2
ARHGEF1-222ENST00000600517 IFFO2Q5TF58 517 aa16.33■□□□□ 0.2
ARHGEF1-222ENST00000600517 FOXP4Q8IVH2 680 aaPredicted RBP16.33■□□□□ 0.2
ARHGEF1-222ENST00000600517 SCYL3Q8IZE3 742 aa16.33■□□□□ 0.2
ARHGEF1-222ENST00000600517 GCC1Q96CN9 775 aa16.33■□□□□ 0.2
ARHGEF1-222ENST00000600517 HERC5Q9UII4 1024 aaKnown RBP16.33■□□□□ 0.2
ARHGEF1-222ENST00000600517 ZNF532Q9HCE3 1301 aa16.33■□□□□ 0.2
ARHGEF1-222ENST00000600517 MAST2Q6P0Q8 1798 aa16.33■□□□□ 0.2
ARHGEF1-222ENST00000600517 OTOFQ9HC10 1997 aa16.33■□□□□ 0.2
ARHGEF1-222ENST00000600517 MAGEB6P1A0A0J9YX57 407 aa16.32■□□□□ 0.2
ARHGEF1-222ENST00000600517 SNAPC2Q13487 334 aa16.32■□□□□ 0.2
ARHGEF1-222ENST00000600517 EXOC6Q8TAG9 804 aa16.32■□□□□ 0.2
ARHGEF1-222ENST00000600517 GPATCH3Q96I76 525 aa16.32■□□□□ 0.2
ARHGEF1-222ENST00000600517 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.32■□□□□ 0.29e-8■■■■□ 19.9
ARHGEF1-222ENST00000600517 R3HDMLQ9H3Y0 253 aa16.32■□□□□ 0.2
ARHGEF1-222ENST00000600517 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.32■□□□□ 0.2
ARHGEF1-222ENST00000600517 KCNH4Q9UQ05 1017 aa16.32■□□□□ 0.2
ARHGEF1-222ENST00000600517 GPR25O00155 361 aa16.31■□□□□ 0.2
ARHGEF1-222ENST00000600517 ADD2P35612 726 aa16.31■□□□□ 0.2
ARHGEF1-222ENST00000600517 ANKRD45Q5TZF3 282 aa16.31■□□□□ 0.2
ARHGEF1-222ENST00000600517 METTL16Q86W50 562 aaKnown RBP16.31■□□□□ 0.2
ARHGEF1-222ENST00000600517 RWDD1Q9H446 243 aaPredicted RBP16.31■□□□□ 0.2
ARHGEF1-222ENST00000600517 PICK1Q9NRD5 415 aa16.31■□□□□ 0.2
ARHGEF1-222ENST00000600517 PALD1Q9ULE6 856 aa16.31■□□□□ 0.2
ARHGEF1-222ENST00000600517 TTC41PQ6P2S7 1318 aa16.3■□□□□ 0.2
ARHGEF1-222ENST00000600517 FAM196BA6NMK8 535 aa16.3■□□□□ 0.2
ARHGEF1-222ENST00000600517 CXCL11O14625 94 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms