RNA–Protein interactions for RNA: ENST00000600077.5

HOMER3-212, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 675 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-212ENST00000600077 PNMA3Q9UL41 463 aa17.37■□□□□ 0.37
HOMER3-212ENST00000600077 COL6A1P12109 1028 aa17.36■□□□□ 0.37
HOMER3-212ENST00000600077 CHAF1AQ13111 956 aaPredicted RBP17.36■□□□□ 0.37
HOMER3-212ENST00000600077 DOCK3Q8IZD9 2030 aa17.35■□□□□ 0.37
HOMER3-212ENST00000600077 CAVIN4Q5BKX8 364 aa17.35■□□□□ 0.37
HOMER3-212ENST00000600077 FBXO33Q7Z6M2 555 aa17.35■□□□□ 0.37
HOMER3-212ENST00000600077 SCYL3Q8IZE3 742 aa17.35■□□□□ 0.37
HOMER3-212ENST00000600077 AFG3L2Q9Y4W6 797 aa17.35■□□□□ 0.37
HOMER3-212ENST00000600077 APAF1O14727 1248 aa17.34■□□□□ 0.37
HOMER3-212ENST00000600077 FOSL2P15408 326 aa17.34■□□□□ 0.37
HOMER3-212ENST00000600077 PTPRAP18433 802 aa17.34■□□□□ 0.37
HOMER3-212ENST00000600077 LMBR1LQ6UX01 489 aa17.34■□□□□ 0.37
HOMER3-212ENST00000600077 ZNF594Q96JF6 807 aaPredicted RBP17.34■□□□□ 0.37
HOMER3-212ENST00000600077 AGTPBP1Q9UPW5 1226 aa17.34■□□□□ 0.37
HOMER3-212ENST00000600077 GCLCP48506 637 aaPredicted RBP17.33■□□□□ 0.36
HOMER3-212ENST00000600077 TCP10Q12799 353 aa17.33■□□□□ 0.36
HOMER3-212ENST00000600077 LRRC26Q2I0M4 334 aa17.33■□□□□ 0.36
HOMER3-212ENST00000600077 MAP3K21Q5TCX8 1036 aa17.33■□□□□ 0.36
HOMER3-212ENST00000600077 DNAAF4Q8WXU2 420 aa17.33■□□□□ 0.36
HOMER3-212ENST00000600077 MYLIPQ8WY64 445 aa17.33■□□□□ 0.36
HOMER3-212ENST00000600077 MRS2Q9HD23 443 aa17.33■□□□□ 0.36
HOMER3-212ENST00000600077 PRKAG2Q9UGJ0 569 aa17.33■□□□□ 0.36
HOMER3-212ENST00000600077 GJD2Q9UKL4 321 aa17.33■□□□□ 0.36
HOMER3-212ENST00000600077 AK9Q5TCS8 1911 aa17.32■□□□□ 0.36
HOMER3-212ENST00000600077 SLC4A2P04920 1241 aa17.32■□□□□ 0.36
HOMER3-212ENST00000600077 TRIM32Q13049 653 aa17.32■□□□□ 0.36
HOMER3-212ENST00000600077 IQSEC3Q9UPP2 1182 aaPredicted RBP17.32■□□□□ 0.36
HOMER3-212ENST00000600077 G2E3Q7L622 706 aa17.31■□□□□ 0.36
HOMER3-212ENST00000600077 TRMT44Q8IYL2 757 aaKnown RBP17.31■□□□□ 0.36
HOMER3-212ENST00000600077 TSPYL6Q8N831 410 aa17.31■□□□□ 0.36
HOMER3-212ENST00000600077 TRIB2Q92519 343 aa17.31■□□□□ 0.36
HOMER3-212ENST00000600077 MROH5Q6ZUA9 1318 aa17.3■□□□□ 0.36
HOMER3-212ENST00000600077 TMEM265A0A087WTH1 108 aa17.3■□□□□ 0.36
HOMER3-212ENST00000600077 PHF20L1A8MW92 1017 aa17.3■□□□□ 0.36
HOMER3-212ENST00000600077 PRKAR2AP13861 404 aaKnown RBP17.3■□□□□ 0.36
HOMER3-212ENST00000600077 HOXD11P31277 338 aaPredicted RBP17.3■□□□□ 0.36
HOMER3-212ENST00000600077 SMAD3P84022 425 aaKnown RBP17.3■□□□□ 0.36
HOMER3-212ENST00000600077 FLIIQ13045 1269 aa17.3■□□□□ 0.36
HOMER3-212ENST00000600077 FKBP5Q13451 457 aaPredicted RBP17.3■□□□□ 0.36
HOMER3-212ENST00000600077 CCDC184Q52MB2 194 aa17.3■□□□□ 0.36
HOMER3-212ENST00000600077 RAPGEFL1Q9UHV5 662 aa17.3■□□□□ 0.36
HOMER3-212ENST00000600077 EYSQ5T1H1 3165 aa17.3■□□□□ 0.36
HOMER3-212ENST00000600077 XRCC5P13010 732 aaKnown RBP17.29■□□□□ 0.36
HOMER3-212ENST00000600077 PABPC4Q13310 644 aaKnown RBP eCLIP17.29■□□□□ 0.36
HOMER3-212ENST00000600077 CDC42EP5Q6NZY7 148 aa17.29■□□□□ 0.36
HOMER3-212ENST00000600077 PROCA1Q8NCQ7 364 aaPredicted RBP17.29■□□□□ 0.36
HOMER3-212ENST00000600077 LRRFIP2Q9Y608 721 aaKnown RBP17.29■□□□□ 0.36
HOMER3-212ENST00000600077 TRIM75PA6NK02 468 aa17.28■□□□□ 0.36
HOMER3-212ENST00000600077 SPINK5Q9NQ38 1064 aaPredicted RBP17.28■□□□□ 0.36
HOMER3-212ENST00000600077 CTNND1O60716 968 aaKnown RBP17.27■□□□□ 0.36
HOMER3-212ENST00000600077 CYP2B6P20813 491 aa17.27■□□□□ 0.36
HOMER3-212ENST00000600077 NFIAQ12857 509 aa17.27■□□□□ 0.36
HOMER3-212ENST00000600077 SOCS4Q8WXH5 440 aa17.27■□□□□ 0.36
HOMER3-212ENST00000600077 NUDT12Q9BQG2 462 aa17.27■□□□□ 0.36
HOMER3-212ENST00000600077 TTYH1Q9H313 450 aaPredicted RBP17.27■□□□□ 0.36
HOMER3-212ENST00000600077 PRUNE2Q8WUY3 3088 aa17.27■□□□□ 0.35
HOMER3-212ENST00000600077 PTPRFP10586 1907 aa17.26■□□□□ 0.35
HOMER3-212ENST00000600077 SHHQ15465 462 aa17.26■□□□□ 0.35
HOMER3-212ENST00000600077 LHX8Q68G74 356 aa17.26■□□□□ 0.35
HOMER3-212ENST00000600077 WDR66Q8TBY9 1149 aa17.26■□□□□ 0.35
HOMER3-212ENST00000600077 SENP6Q9GZR1 1112 aaPredicted RBP17.26■□□□□ 0.35
HOMER3-212ENST00000600077 FAM198AQ9UFP1 575 aa17.26■□□□□ 0.35
HOMER3-212ENST00000600077 MUC3AQ02505 3323 aa17.25■□□□□ 0.35
HOMER3-212ENST00000600077 ZKSCAN1P17029 563 aaPredicted RBP17.25■□□□□ 0.35
HOMER3-212ENST00000600077 MAP3K10Q02779 954 aa17.25■□□□□ 0.35
HOMER3-212ENST00000600077 MAP3K12Q12852 859 aa17.25■□□□□ 0.35
HOMER3-212ENST00000600077 TWISTNBQ3B726 338 aaPredicted RBP17.25■□□□□ 0.35
HOMER3-212ENST00000600077 EPHA10Q5JZY3 1008 aa17.25■□□□□ 0.35
HOMER3-212ENST00000600077 TREML2Q5T2D2 321 aa17.25■□□□□ 0.35
HOMER3-212ENST00000600077 USP40Q9NVE5 1235 aa17.25■□□□□ 0.35
HOMER3-212ENST00000600077 DAGLAQ9Y4D2 1042 aa17.25■□□□□ 0.35
HOMER3-212ENST00000600077 ATRNL1Q5VV63 1379 aa17.25■□□□□ 0.35
HOMER3-212ENST00000600077 LAMA2P24043 3122 aaKnown RBP17.25■□□□□ 0.35
HOMER3-212ENST00000600077 ENTPD3O75355 529 aa17.24■□□□□ 0.35
HOMER3-212ENST00000600077 CACNB2Q08289 660 aaPredicted RBP17.24■□□□□ 0.35
HOMER3-212ENST00000600077 TBC1D2Q9BYX2 928 aa17.24■□□□□ 0.35
HOMER3-212ENST00000600077 PUS3Q9BZE2 481 aaKnown RBP17.24■□□□□ 0.35
HOMER3-212ENST00000600077 MORF4L1Q9UBU8 362 aa17.24■□□□□ 0.35
HOMER3-212ENST00000600077 KIF16BQ96L93 1317 aa17.23■□□□□ 0.35
HOMER3-212ENST00000600077 GRM8O00222 908 aa17.23■□□□□ 0.35
HOMER3-212ENST00000600077 PDE3AQ14432 1141 aa17.23■□□□□ 0.35
HOMER3-212ENST00000600077 ZSCAN29Q8IWY8 852 aaPredicted RBP17.23■□□□□ 0.35
HOMER3-212ENST00000600077 ATXN2LQ8WWM7 1075 aaKnown RBP17.23■□□□□ 0.35
HOMER3-212ENST00000600077 ARIH1Q9Y4X5 557 aaPredicted RBP17.23■□□□□ 0.35
HOMER3-212ENST00000600077 PDE8BO95263 885 aa17.22■□□□□ 0.35
HOMER3-212ENST00000600077 CCDC27Q2M243 656 aa17.22■□□□□ 0.35
HOMER3-212ENST00000600077 METTL24Q5JXM2 366 aa17.22■□□□□ 0.35
HOMER3-212ENST00000600077 BEND3Q5T5X7 828 aa17.22■□□□□ 0.35
HOMER3-212ENST00000600077 ZFPM1Q8IX07 1006 aa17.22■□□□□ 0.35
HOMER3-212ENST00000600077 IDI2Q9BXS1 227 aa17.22■□□□□ 0.35
HOMER3-212ENST00000600077 DOCK1Q14185 1865 aa17.21■□□□□ 0.35
HOMER3-212ENST00000600077 MAST2Q6P0Q8 1798 aa17.21■□□□□ 0.35
HOMER3-212ENST00000600077 CCND3P30281 292 aaPredicted RBP17.21■□□□□ 0.35
HOMER3-212ENST00000600077 C9orf50Q5SZB4 431 aa17.21■□□□□ 0.35
HOMER3-212ENST00000600077 ASCC2Q9H1I8 757 aaPredicted RBP17.21■□□□□ 0.35
HOMER3-212ENST00000600077 C9orf78Q9NZ63 289 aaPredicted RBP17.21■□□□□ 0.35
HOMER3-212ENST00000600077 PHIPQ8WWQ0 1821 aa17.21■□□□□ 0.35
HOMER3-212ENST00000600077 DOCK2Q92608 1830 aa17.21■□□□□ 0.35
HOMER3-212ENST00000600077 PLXNB2O15031 1838 aa17.2■□□□□ 0.34
HOMER3-212ENST00000600077 MSCO60682 206 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms