RNA–Protein interactions for RNA: ENST00000599082.1

SOX2-OT-231, SOX2 overlapping transcript, human

TSL 5

Gene SOX2-OT, Length 839 nt, Biotype sense overlapping.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SOX2-OT-231	ENST00000599082	INPP5A	Q14642	412 aa		10.23	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	AGGF1	Q8N302	714 aa	eCLIP	10.23	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	RAD18	Q9NS91	495 aa		10.23	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	SYNGAP1	Q96PV0	1343 aa		10.23	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	BPNT1	O95861	308 aa		10.22	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	SLFN14	P0C7P3	912 aa		10.22	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	NUTM2G	Q5VZR2	741 aa		10.22	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	DIEXF	Q68CQ4	756 aa	Known RBP	10.22	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	LRFN4	Q6PJG9	635 aa		10.22	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	REC114	Q7Z4M0	266 aa		10.22	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	SLITRK4	Q8IW52	837 aa		10.22	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	SMG8	Q8ND04	991 aa	Known RBP	10.22	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	NKD1	Q969G9	470 aa		10.22	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	PLPPR2	Q96GM1	343 aa		10.22	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	SPATA32	Q96LK8	384 aa		10.22	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	GML	Q99445	158 aa		10.22	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	SUGCT	Q9HAC7	445 aa		10.22	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	ALX3	O95076	343 aa		10.21	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	ATF4	P18848	351 aa	Predicted RBP	10.21	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	SEZ6	Q53EL9	994 aa		10.21	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	ZC3H12A	Q5D1E8	599 aa	Known RBP	10.21	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	AKAP4	Q5JQC9	854 aa		10.21	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	WIPI1	Q5MNZ9	446 aa	Predicted RBP	10.21	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	ALYREF	Q86V81	257 aa	Known RBP	10.21	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	NACC1	Q96RE7	527 aa		10.21	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	CYP4F12	Q9HCS2	524 aa		10.21	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	USP21	Q9UK80	565 aa		10.21	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	PPP1R9A	Q9ULJ8	1098 aa		10.21	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	C9orf172	C9J069	976 aa		10.2	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	GFRA2	O00451	464 aa		10.2	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	TMPRSS2	O15393	492 aa		10.2	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	APBA3	O96018	575 aa		10.2	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	CWF19L2	Q2TBE0	894 aa	Known RBP	10.2	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	VPS37D	Q86XT2	251 aa		10.2	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	AKTIP	Q9H8T0	292 aa		10.2	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	GINM1	Q9NU53	330 aa		10.2	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	SNCAIP	Q9Y6H5	919 aa		10.2	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	DCDC2C	A8MYV0	355 aa		10.19	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	ADH5	P11766	374 aa		10.19	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	DNAJA1	P31689	397 aa	Known RBP	10.19	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	ID3	Q02535	119 aa		10.19	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	ARID5A	Q03989	594 aa		10.19	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	HDX	Q7Z353	690 aa		10.19	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	SREK1	Q8WXA9	508 aa	Known RBP	10.19	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	ELMO3	Q96BJ8	720 aa		10.19	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	BRMS1	Q9HCU9	246 aa		10.19	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	EFR3B	Q9Y2G0	817 aa		10.19	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	TIAF1	O95411	115 aa		10.18	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	SOX9	P48436	509 aa		10.18	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	NRG1	Q02297	640 aa	Predicted RBP	10.18	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	SOX4	Q06945	474 aa	Predicted RBP	10.18	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	CYFIP1	Q7L576	1253 aa		10.18	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	C12orf40	Q86WS4	652 aa		10.18	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	SEC16B	Q96JE7	1060 aa		10.18	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	CRIM1	Q9NZV1	1036 aa		10.18	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	PRKAG2	Q9UGJ0	569 aa		10.18	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	10.18	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	CSAD	Q9Y600	493 aa		10.18	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	DRD2	P14416	443 aa		10.17	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	NASP	P49321	788 aa	Predicted RBP	10.17	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	ERVK-24	P63145	666 aa		10.17	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	RING1	Q06587	406 aa		10.17	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	COL9A2	Q14055	689 aa	Predicted RBP	10.17	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	ADGRE1	Q14246	886 aa		10.17	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	ANKRD34A	Q69YU3	496 aa		10.17	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	FDX2	Q6P4F2	183 aa		10.17	□□□□□ -0.78
SOX2-OT-231	ENST00000599082		Q6ZS46	218 aa		10.17	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	C12orf50	Q8NA57	414 aa	Predicted RBP	10.17	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	AP4E1	Q9UPM8	1137 aa		10.17	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	FGR	P09769	529 aa		10.16	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	NOS3	P29474	1203 aa		10.16	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	MBTPS1	Q14703	1052 aa		10.16	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	MCF2L2	Q86YR7	1114 aa		10.16	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	WFDC12	Q8WWY7	111 aa		10.16	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	TANGO6	Q9C0B7	1094 aa		10.16	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	HIF3A	Q9Y2N7	669 aa		10.16	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	GRIN3B	O60391	1043 aa		10.15	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	MCM4	P33991	863 aa		10.15	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	IREB2	P48200	963 aa	Known RBP	10.15	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	SF3A1	Q15459	793 aa	Known RBP	10.15	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	PPM1J	Q5JR12	505 aa		10.15	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	REXO1	Q8N1G1	1221 aa	Known RBP	10.15	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	FANCD2OS	Q96PS1	177 aa		10.15	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	DISC1	Q9NRI5	854 aa		10.15	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	TACC3	Q9Y6A5	838 aa		10.15	□□□□□ -0.78
SOX2-OT-231	ENST00000599082	PRAMEF27	A3QJZ7	478 aa		10.14	□□□□□ -0.79
SOX2-OT-231	ENST00000599082	KRBA1	A5PL33	1030 aa		10.14	□□□□□ -0.79
SOX2-OT-231	ENST00000599082		K7ELQ4	463 aa	Predicted RBP	10.14	□□□□□ -0.79
SOX2-OT-231	ENST00000599082	GLB1	P16278	677 aa		10.14	□□□□□ -0.79
SOX2-OT-231	ENST00000599082	PREP	P48147	710 aa		10.14	□□□□□ -0.79
SOX2-OT-231	ENST00000599082	ZNF165	P49910	485 aa		10.14	□□□□□ -0.79
SOX2-OT-231	ENST00000599082	CLC	Q05315	142 aa		10.14	□□□□□ -0.79
SOX2-OT-231	ENST00000599082	C2CD4A	Q8NCU7	369 aa	Predicted RBP	10.14	□□□□□ -0.79
SOX2-OT-231	ENST00000599082	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	10.14	□□□□□ -0.79
SOX2-OT-231	ENST00000599082	GSX1	Q9H4S2	264 aa	Predicted RBP	10.14	□□□□□ -0.79
SOX2-OT-231	ENST00000599082	PCDHB14	Q9Y5E9	798 aa		10.14	□□□□□ -0.79
SOX2-OT-231	ENST00000599082	PRR36	Q9H6K5	1346 aa		10.13	□□□□□ -0.79
SOX2-OT-231	ENST00000599082	GK5	Q6ZS86	529 aa		10.13	□□□□□ -0.79
SOX2-OT-231	ENST00000599082	DYM	Q7RTS9	669 aa		10.13	□□□□□ -0.79
SOX2-OT-231	ENST00000599082		Q8N3U1	123 aa		10.13	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms