RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 GNRH1P01148 92 aa14.63□□□□□ -0.07
SHKBP1-213ENST00000597325 UQCRFS1P1P0C7P4 283 aa14.63□□□□□ -0.07
SHKBP1-213ENST00000597325 PRMT2P55345 433 aa14.63□□□□□ -0.07
SHKBP1-213ENST00000597325 LACTBP83111 547 aaPredicted RBP14.63□□□□□ -0.07
SHKBP1-213ENST00000597325 TAF1CQ15572 869 aaPredicted RBP14.63□□□□□ -0.07
SHKBP1-213ENST00000597325 TTC22Q5TAA0 569 aa14.63□□□□□ -0.07
SHKBP1-213ENST00000597325 ZNF804AQ7Z570 1209 aa14.63□□□□□ -0.07
SHKBP1-213ENST00000597325 ZFYVE28Q9HCC9 887 aa14.63□□□□□ -0.07
SHKBP1-213ENST00000597325 OTOFQ9HC10 1997 aa14.62□□□□□ -0.07
SHKBP1-213ENST00000597325 FARP2O94887 1054 aaPredicted RBP14.62□□□□□ -0.07
SHKBP1-213ENST00000597325 ATP5JP18859 108 aa14.62□□□□□ -0.07
SHKBP1-213ENST00000597325 MMP14P50281 582 aa14.62□□□□□ -0.07
SHKBP1-213ENST00000597325 BCAMP50895 628 aa14.62□□□□□ -0.07
SHKBP1-213ENST00000597325 CCDC102BQ68D86 513 aa14.62□□□□□ -0.07
SHKBP1-213ENST00000597325 PI4K2BQ8TCG2 481 aa14.62□□□□□ -0.07
SHKBP1-213ENST00000597325 BRI3BPQ8WY22 251 aa14.62□□□□□ -0.07
SHKBP1-213ENST00000597325 USP2O75604 605 aaPredicted RBP14.61□□□□□ -0.07
SHKBP1-213ENST00000597325 CCL5P13501 91 aa14.61□□□□□ -0.07
SHKBP1-213ENST00000597325 KLRK1P26718 216 aa14.61□□□□□ -0.07
SHKBP1-213ENST00000597325 HIBADHP31937 336 aaKnown RBP14.61□□□□□ -0.07
SHKBP1-213ENST00000597325 PHKA1P46020 1223 aa14.61□□□□□ -0.07
SHKBP1-213ENST00000597325 GYG1P46976 350 aa14.61□□□□□ -0.07
SHKBP1-213ENST00000597325 BMP2KLQ5H9B9 411 aa14.61□□□□□ -0.07
SHKBP1-213ENST00000597325 C15orf52Q6ZUT6 534 aaKnown RBP14.61□□□□□ -0.07
SHKBP1-213ENST00000597325 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.61□□□□□ -0.07
SHKBP1-213ENST00000597325 RPTORQ8N122 1335 aa14.61□□□□□ -0.07
SHKBP1-213ENST00000597325 MYO3BQ8WXR4 1341 aa14.61□□□□□ -0.07
SHKBP1-213ENST00000597325 TRIM6-TRIM34B2RNG4 842 aa14.6□□□□□ -0.07
SHKBP1-213ENST00000597325 TLR2O60603 784 aa14.6□□□□□ -0.07
SHKBP1-213ENST00000597325 FRAT2O75474 233 aaPredicted RBP14.6□□□□□ -0.07
SHKBP1-213ENST00000597325 CTGFP29279 349 aa14.6□□□□□ -0.07
SHKBP1-213ENST00000597325 ARID4AP29374 1257 aaPredicted RBP14.6□□□□□ -0.07
SHKBP1-213ENST00000597325 FAM43AQ8N2R8 423 aa14.6□□□□□ -0.07
SHKBP1-213ENST00000597325 U2AF1L4Q8WU68 220 aaKnown RBP14.6□□□□□ -0.07
SHKBP1-213ENST00000597325 ZNF512BQ96KM6 892 aaPredicted RBP14.6□□□□□ -0.07
SHKBP1-213ENST00000597325 GUCD1Q96NT3 240 aa14.6□□□□□ -0.07
SHKBP1-213ENST00000597325 DNAJC2Q99543 621 aaKnown RBP14.6□□□□□ -0.07
SHKBP1-213ENST00000597325 BOLA2Q9H3K6 86 aa14.6□□□□□ -0.07
SHKBP1-213ENST00000597325 RAPGEFL1Q9UHV5 662 aa14.6□□□□□ -0.07
SHKBP1-213ENST00000597325 MYH13Q9UKX3 1938 aa14.59□□□□□ -0.07
SHKBP1-213ENST00000597325 SEMA3EO15041 775 aa14.59□□□□□ -0.07
SHKBP1-213ENST00000597325 GSPT1P15170 499 aaKnown RBP14.59□□□□□ -0.07
SHKBP1-213ENST00000597325 GRK4P32298 578 aa14.59□□□□□ -0.07
SHKBP1-213ENST00000597325 PLA2G5P39877 138 aa14.59□□□□□ -0.07
SHKBP1-213ENST00000597325 STRIP1Q5VSL9 837 aa14.59□□□□□ -0.07
SHKBP1-213ENST00000597325 FBXO33Q7Z6M2 555 aa14.59□□□□□ -0.07
SHKBP1-213ENST00000597325 ANKRD13AQ8IZ07 590 aa14.59□□□□□ -0.07
SHKBP1-213ENST00000597325 OPTNQ96CV9 577 aa14.59□□□□□ -0.07
SHKBP1-213ENST00000597325 FAM84BQ96KN1 310 aaPredicted RBP14.59□□□□□ -0.07
SHKBP1-213ENST00000597325 HAUS7Q99871 368 aa14.59□□□□□ -0.07
SHKBP1-213ENST00000597325 RNF208Q9H0X6 261 aa14.59□□□□□ -0.07
SHKBP1-213ENST00000597325 SRRDQ9UH36 339 aa14.59□□□□□ -0.07
SHKBP1-213ENST00000597325 PPP2R3BQ9Y5P8 575 aa14.59□□□□□ -0.07
SHKBP1-213ENST00000597325 IRS2Q9Y4H2 1338 aa14.59□□□□□ -0.07
SHKBP1-213ENST00000597325 ECM29Q5VYK3 1845 aa14.58□□□□□ -0.08
SHKBP1-213ENST00000597325 IREB2P48200 963 aaKnown RBP14.58□□□□□ -0.08
SHKBP1-213ENST00000597325 KIF22Q14807 665 aa14.58□□□□□ -0.08
SHKBP1-213ENST00000597325 TDHQ8IZJ6 230 aa14.58□□□□□ -0.08
SHKBP1-213ENST00000597325 RILPL2Q969X0 211 aa14.58□□□□□ -0.08
SHKBP1-213ENST00000597325 DENND2AQ9ULE3 1009 aa14.58□□□□□ -0.08
SHKBP1-213ENST00000597325 AK9Q5TCS8 1911 aa14.58□□□□□ -0.08
SHKBP1-213ENST00000597325 CCL15-CCL14A0A0B4J2E2 113 aa14.57□□□□□ -0.08
SHKBP1-213ENST00000597325 POTEB2H3BUK9 544 aa14.57□□□□□ -0.08
SHKBP1-213ENST00000597325 SGPL1O95470 568 aa14.57□□□□□ -0.08
SHKBP1-213ENST00000597325 MAP4K4O95819 1239 aaPredicted RBP14.57□□□□□ -0.08
SHKBP1-213ENST00000597325 MCAMP43121 646 aa14.57□□□□□ -0.08
SHKBP1-213ENST00000597325 RASGRF1Q13972 1273 aa14.57□□□□□ -0.08
SHKBP1-213ENST00000597325 CCL15Q16663 113 aa14.57□□□□□ -0.08
SHKBP1-213ENST00000597325 NBPF12Q5TAG4 269 aaPredicted RBP14.57□□□□□ -0.08
SHKBP1-213ENST00000597325 TXNRD3Q86VQ6 643 aa14.57□□□□□ -0.08
SHKBP1-213ENST00000597325 SPATA5Q8NB90 893 aa14.57□□□□□ -0.08
SHKBP1-213ENST00000597325 EVI5LQ96CN4 794 aa14.57□□□□□ -0.08
SHKBP1-213ENST00000597325 COA1Q9GZY4 146 aa14.57□□□□□ -0.08
SHKBP1-213ENST00000597325 ELP3Q9H9T3 547 aa14.57□□□□□ -0.08
SHKBP1-213ENST00000597325 PAG1Q9NWQ8 432 aa14.57□□□□□ -0.08
SHKBP1-213ENST00000597325 IQSEC3Q9UPP2 1182 aaPredicted RBP14.57□□□□□ -0.08
SHKBP1-213ENST00000597325 GOLIM4O00461 696 aa14.56□□□□□ -0.08
SHKBP1-213ENST00000597325 SDSP20132 328 aa14.56□□□□□ -0.08
SHKBP1-213ENST00000597325 HOXD11P31277 338 aaPredicted RBP14.56□□□□□ -0.08
SHKBP1-213ENST00000597325 TTF1Q15361 905 aaPredicted RBP14.56□□□□□ -0.08
SHKBP1-213ENST00000597325 SUPT20HL1Q3ZLR7 823 aa14.56□□□□□ -0.08
SHKBP1-213ENST00000597325 CASC1Q6TDU7 716 aa14.56□□□□□ -0.08
SHKBP1-213ENST00000597325 CNKSR2Q8WXI2 1034 aa14.56□□□□□ -0.08
SHKBP1-213ENST00000597325 TRIM47Q96LD4 638 aa14.56□□□□□ -0.08
SHKBP1-213ENST00000597325 FSD1Q9BTV5 496 aa14.56□□□□□ -0.08
SHKBP1-213ENST00000597325 SNRKQ9NRH2 765 aa14.56□□□□□ -0.08
SHKBP1-213ENST00000597325 PDS5AQ29RF7 1337 aaKnown RBP14.56□□□□□ -0.08
SHKBP1-213ENST00000597325 ZAP70P43403 619 aa14.55□□□□□ -0.08
SHKBP1-213ENST00000597325 GTF2A2P52657 109 aa14.55□□□□□ -0.08
SHKBP1-213ENST00000597325 CHAF1AQ13111 956 aaPredicted RBP14.55□□□□□ -0.08
SHKBP1-213ENST00000597325 FAM109BQ6ICB4 259 aaPredicted RBP14.55□□□□□ -0.08
SHKBP1-213ENST00000597325 PI16Q6UXB8 463 aa14.55□□□□□ -0.08
SHKBP1-213ENST00000597325 KIAA0825Q8IV33 1275 aa14.55□□□□□ -0.08
SHKBP1-213ENST00000597325 MTMR14Q8NCE2 650 aa14.55□□□□□ -0.08
SHKBP1-213ENST00000597325 CD209Q9NNX6 404 aa14.55□□□□□ -0.08
SHKBP1-213ENST00000597325 HMG20BQ9P0W2 317 aa14.55□□□□□ -0.08
SHKBP1-213ENST00000597325 ZBTB22O15209 634 aa14.54□□□□□ -0.08
SHKBP1-213ENST00000597325 CDC45O75419 566 aa14.54□□□□□ -0.08
SHKBP1-213ENST00000597325 IL1R1P14778 569 aa14.54□□□□□ -0.08
SHKBP1-213ENST00000597325 OSBPP22059 807 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms