RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 HELLSQ9NRZ9 838 aa11.16□□□□□ -0.62
ZNF548-206ENST00000597047 ECM29Q5VYK3 1845 aa11.16□□□□□ -0.62
ZNF548-206ENST00000597047 MINDY4BA8MYZ0 360 aa11.15□□□□□ -0.62
ZNF548-206ENST00000597047 CDC45O75419 566 aa11.15□□□□□ -0.62
ZNF548-206ENST00000597047 WDHD1O75717 1129 aaPredicted RBP11.15□□□□□ -0.62
ZNF548-206ENST00000597047 TDO2P48775 406 aa11.15□□□□□ -0.62
ZNF548-206ENST00000597047 NBPF12Q5TAG4 269 aaPredicted RBP11.15□□□□□ -0.62
ZNF548-206ENST00000597047 CDCA5Q96FF9 252 aa11.15□□□□□ -0.62
ZNF548-206ENST00000597047 STRBPQ96SI9 672 aaKnown RBP11.15□□□□□ -0.62
ZNF548-206ENST00000597047 TRIM34Q9BYJ4 488 aa11.15□□□□□ -0.62
ZNF548-206ENST00000597047 MCM9Q9NXL9 1143 aa11.15□□□□□ -0.62
ZNF548-206ENST00000597047 FAM198AQ9UFP1 575 aa11.15□□□□□ -0.62
ZNF548-206ENST00000597047 FZD1Q9UP38 647 aa11.15□□□□□ -0.62
ZNF548-206ENST00000597047 PATL2C9JE40 543 aaKnown RBP11.14□□□□□ -0.63
ZNF548-206ENST00000597047 IGSF3O75054 1194 aa11.14□□□□□ -0.63
ZNF548-206ENST00000597047 MFAP1P55081 439 aaKnown RBP11.14□□□□□ -0.63
ZNF548-206ENST00000597047 KIAA1211Q6ZU35 1233 aa11.14□□□□□ -0.63
ZNF548-206ENST00000597047 MIGA2Q7L4E1 593 aa11.14□□□□□ -0.63
ZNF548-206ENST00000597047 ZNF589Q86UQ0 364 aaPredicted RBP11.14□□□□□ -0.63
ZNF548-206ENST00000597047 CDAN1Q8IWY9 1227 aa11.14□□□□□ -0.63
ZNF548-206ENST00000597047 AMOTL1Q8IY63 956 aa11.14□□□□□ -0.63
ZNF548-206ENST00000597047 RBM46Q8TBY0 533 aaKnown RBP11.14□□□□□ -0.63
ZNF548-206ENST00000597047 FAM151AQ8WW52 585 aa11.14□□□□□ -0.63
ZNF548-206ENST00000597047 PALD1Q9ULE6 856 aa11.14□□□□□ -0.63
ZNF548-206ENST00000597047 FLT1P17948 1338 aa11.13□□□□□ -0.63
ZNF548-206ENST00000597047 CCDC171Q6TFL3 1326 aa11.13□□□□□ -0.63
ZNF548-206ENST00000597047 CYP2D7A0A087X1C5 515 aa11.13□□□□□ -0.63
ZNF548-206ENST00000597047 DDTLA6NHG4 134 aaPredicted RBP11.13□□□□□ -0.63
ZNF548-206ENST00000597047 FAM196BA6NMK8 535 aa11.13□□□□□ -0.63
ZNF548-206ENST00000597047 CELF2O95319 508 aaKnown RBP11.13□□□□□ -0.63
ZNF548-206ENST00000597047 SLURP2P0DP57 97 aa11.13□□□□□ -0.63
ZNF548-206ENST00000597047 CYP2D6P10635 497 aa11.13□□□□□ -0.63
ZNF548-206ENST00000597047 GNAT2P19087 354 aa11.13□□□□□ -0.63
ZNF548-206ENST00000597047 NF2P35240 595 aa11.13□□□□□ -0.63
ZNF548-206ENST00000597047 VPS53Q5VIR6 699 aa11.13□□□□□ -0.63
ZNF548-206ENST00000597047 TMED8Q6PL24 325 aaPredicted RBP11.13□□□□□ -0.63
ZNF548-206ENST00000597047 CERS3Q8IU89 383 aa11.13□□□□□ -0.63
ZNF548-206ENST00000597047 CRACR2BQ8N4Y2 399 aaPredicted RBP11.13□□□□□ -0.63
ZNF548-206ENST00000597047 CSRNP1Q96S65 589 aa11.13□□□□□ -0.63
ZNF548-206ENST00000597047 NACAP1Q9BZK3 213 aa11.13□□□□□ -0.63
ZNF548-206ENST00000597047 OSBPL5Q9H0X9 879 aaPredicted RBP11.13□□□□□ -0.63
ZNF548-206ENST00000597047 NAPBQ9H115 298 aa11.13□□□□□ -0.63
ZNF548-206ENST00000597047 PGAP2Q9UHJ9 254 aa11.13□□□□□ -0.63
ZNF548-206ENST00000597047 MYH1P12882 1939 aa11.13□□□□□ -0.63
ZNF548-206ENST00000597047 CNTNAP1P78357 1384 aa11.13□□□□□ -0.63
ZNF548-206ENST00000597047 PITPNM2Q9BZ72 1349 aa11.12□□□□□ -0.63
ZNF548-206ENST00000597047 BAZ2AQ9UIF9 1905 aaKnown RBP11.12□□□□□ -0.63
ZNF548-206ENST00000597047 GSG1L2A8MUP6 293 aa11.12□□□□□ -0.63
ZNF548-206ENST00000597047 USP17L12C9JPN9 530 aa11.12□□□□□ -0.63
ZNF548-206ENST00000597047 USP17L21D6R901 530 aa11.12□□□□□ -0.63
ZNF548-206ENST00000597047 ENTPD3O75355 529 aa11.12□□□□□ -0.63
ZNF548-206ENST00000597047 HLA-DOAP06340 250 aa11.12□□□□□ -0.63
ZNF548-206ENST00000597047 SUPT20HL1Q3ZLR7 823 aa11.12□□□□□ -0.63
ZNF548-206ENST00000597047 PAXIP1Q6ZW49 1069 aaPredicted RBP11.12□□□□□ -0.63
ZNF548-206ENST00000597047 MOB2Q70IA6 237 aa11.12□□□□□ -0.63
ZNF548-206ENST00000597047 FAM83AQ86UY5 434 aa11.12□□□□□ -0.63
ZNF548-206ENST00000597047 IFNL3Q8IZI9 196 aa11.12□□□□□ -0.63
ZNF548-206ENST00000597047 ESYT1Q9BSJ8 1104 aa11.12□□□□□ -0.63
ZNF548-206ENST00000597047 IDI2Q9BXS1 227 aa11.12□□□□□ -0.63
ZNF548-206ENST00000597047 IL25Q9H293 177 aa11.12□□□□□ -0.63
ZNF548-206ENST00000597047 DCP1AQ9NPI6 582 aaPredicted RBP11.12□□□□□ -0.63
ZNF548-206ENST00000597047 ANO2Q9NQ90 1003 aa11.12□□□□□ -0.63
ZNF548-206ENST00000597047 CDK5RAP2Q96SN8 1893 aa11.12□□□□□ -0.63
ZNF548-206ENST00000597047 ITGBL1O95965 494 aaPredicted RBP11.11□□□□□ -0.63
ZNF548-206ENST00000597047 HSPD1P10809 573 aaKnown RBP11.11□□□□□ -0.63
ZNF548-206ENST00000597047 HAND2P61296 217 aa11.11□□□□□ -0.63
ZNF548-206ENST00000597047 EVX2Q03828 476 aa11.11□□□□□ -0.63
ZNF548-206ENST00000597047 GRM1Q13255 1194 aa11.11□□□□□ -0.63
ZNF548-206ENST00000597047 FKBP1CQ5VVH2 108 aa11.11□□□□□ -0.63
ZNF548-206ENST00000597047 SH3BP5LQ7L8J4 393 aa11.11□□□□□ -0.63
ZNF548-206ENST00000597047 TTC6Q86TZ1 520 aa11.11□□□□□ -0.63
ZNF548-206ENST00000597047 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.11□□□□□ -0.63
ZNF548-206ENST00000597047 ATP8A2Q9NTI2 1148 aa11.11□□□□□ -0.63
ZNF548-206ENST00000597047 ANGEL1Q9UNK9 670 aaKnown RBP11.11□□□□□ -0.63
ZNF548-206ENST00000597047 RFX7Q2KHR2 1363 aa11.11□□□□□ -0.63
ZNF548-206ENST00000597047 NAV1Q8NEY1 1877 aa11.1□□□□□ -0.63
ZNF548-206ENST00000597047 UBE2Q2LH0YL09 131 aa11.1□□□□□ -0.63
ZNF548-206ENST00000597047 SGSM2O43147 1006 aa11.1□□□□□ -0.63
ZNF548-206ENST00000597047 PLCD1P51178 756 aa11.1□□□□□ -0.63
ZNF548-206ENST00000597047 PTH1RQ03431 593 aa11.1□□□□□ -0.63
ZNF548-206ENST00000597047 CTDSPL2Q05D32 466 aa11.1□□□□□ -0.63
ZNF548-206ENST00000597047 FSTL1Q12841 308 aa11.1□□□□□ -0.63
ZNF548-206ENST00000597047 CTR9Q6PD62 1173 aa11.1□□□□□ -0.63
ZNF548-206ENST00000597047 C2orf69Q8N8R5 385 aa11.1□□□□□ -0.63
ZNF548-206ENST00000597047 DYNLL2Q96FJ2 89 aa11.1□□□□□ -0.63
ZNF548-206ENST00000597047 TEPSINQ96N21 525 aa11.1□□□□□ -0.63
ZNF548-206ENST00000597047 EPB41L4AQ9HCS5 686 aaPredicted RBP11.1□□□□□ -0.63
ZNF548-206ENST00000597047 TOMM22Q9NS69 142 aa11.1□□□□□ -0.63
ZNF548-206ENST00000597047 ABT1Q9ULW3 272 aaKnown RBP11.1□□□□□ -0.63
ZNF548-206ENST00000597047 PPP2R3BQ9Y5P8 575 aa11.1□□□□□ -0.63
ZNF548-206ENST00000597047 SMIM22K7EJ46 135 aa11.09□□□□□ -0.63
ZNF548-206ENST00000597047 MPHOSPH10O00566 681 aaKnown RBP11.09□□□□□ -0.63
ZNF548-206ENST00000597047 PPP1R12BO60237 982 aaPredicted RBP11.09□□□□□ -0.63
ZNF548-206ENST00000597047 FGAP02671 866 aa11.09□□□□□ -0.63
ZNF548-206ENST00000597047 RRP12Q5JTH9 1297 aaKnown RBP11.09□□□□□ -0.63
ZNF548-206ENST00000597047 DCAF15Q66K64 600 aa11.09□□□□□ -0.63
ZNF548-206ENST00000597047 ARMC9Q7Z3E5 817 aa11.09□□□□□ -0.63
ZNF548-206ENST00000597047 TICAM2Q86XR7 235 aa11.09□□□□□ -0.63
ZNF548-206ENST00000597047 HOOK2Q96ED9 719 aa11.09□□□□□ -0.63
ZNF548-206ENST00000597047 DHX36Q9H2U1 1008 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms