RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 WBP1LQ9NX94 342 aa26.61■■□□□ 1.85
HOMER3-206ENST00000594439 SALL3Q9BXA9 1300 aa26.61■■□□□ 1.85
HOMER3-206ENST00000594439 MYH7P12883 1935 aa26.61■■□□□ 1.85
HOMER3-206ENST00000594439 DYNLL1P63167 89 aaKnown RBP26.6■■□□□ 1.85
HOMER3-206ENST00000594439 ANKRD13AQ8IZ07 590 aa26.6■■□□□ 1.85
HOMER3-206ENST00000594439 TTC41PQ6P2S7 1318 aa26.6■■□□□ 1.85
HOMER3-206ENST00000594439 ATRNL1Q5VV63 1379 aa26.59■■□□□ 1.85
HOMER3-206ENST00000594439 KIF23Q02241 960 aaPredicted RBP26.59■■□□□ 1.85
HOMER3-206ENST00000594439 MAP2K1Q02750 393 aaPredicted RBP26.59■■□□□ 1.85
HOMER3-206ENST00000594439 SLC9C2Q5TAH2 1124 aa26.59■■□□□ 1.85
HOMER3-206ENST00000594439 DCAF15Q66K64 600 aa26.59■■□□□ 1.85
HOMER3-206ENST00000594439 MIGA1Q8NAN2 632 aa26.59■■□□□ 1.85
HOMER3-206ENST00000594439 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.59■■□□□ 1.85
HOMER3-206ENST00000594439 ZBTB47Q9UFB7 747 aaPredicted RBP26.59■■□□□ 1.85
HOMER3-206ENST00000594439 COL2A1P02458 1487 aaPredicted RBP26.58■■□□□ 1.85
HOMER3-206ENST00000594439 DDTLA6NHG4 134 aaPredicted RBP26.58■■□□□ 1.85
HOMER3-206ENST00000594439 MAP3K9P80192 1104 aa26.58■■□□□ 1.85
HOMER3-206ENST00000594439 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.58■■□□□ 1.85
HOMER3-206ENST00000594439 MIGA2Q7L4E1 593 aa26.58■■□□□ 1.85
HOMER3-206ENST00000594439 SLC10A4Q96EP9 437 aa26.58■■□□□ 1.85
HOMER3-206ENST00000594439 TCRBV5S4A2TA0A5A2 114 aa26.57■■□□□ 1.84
HOMER3-206ENST00000594439 MX1P20591 662 aa26.57■■□□□ 1.84
HOMER3-206ENST00000594439 ZSCAN29Q8IWY8 852 aaPredicted RBP26.57■■□□□ 1.84
HOMER3-206ENST00000594439 PI4K2BQ8TCG2 481 aa26.57■■□□□ 1.84
HOMER3-206ENST00000594439 CSRNP1Q96S65 589 aa26.57■■□□□ 1.84
HOMER3-206ENST00000594439 ZNF341Q9BYN7 854 aa26.57■■□□□ 1.84
HOMER3-206ENST00000594439 OSBPL5Q9H0X9 879 aaPredicted RBP26.57■■□□□ 1.84
HOMER3-206ENST00000594439 ZNF532Q9HCE3 1301 aa26.57■■□□□ 1.84
HOMER3-206ENST00000594439 SPRYD7Q5W111 196 aa26.56■■□□□ 1.84
HOMER3-206ENST00000594439 RIOK1Q9BRS2 568 aaKnown RBP26.56■■□□□ 1.84
HOMER3-206ENST00000594439 PCNTO95613 3336 aa26.55■■□□□ 1.84
HOMER3-206ENST00000594439 ADD2P35612 726 aa26.55■■□□□ 1.84
HOMER3-206ENST00000594439 VGLL4Q14135 290 aa26.55■■□□□ 1.84
HOMER3-206ENST00000594439 CERS3Q8IU89 383 aa26.55■■□□□ 1.84
HOMER3-206ENST00000594439 TGFBRAP1Q8WUH2 860 aa26.55■■□□□ 1.84
HOMER3-206ENST00000594439 WNK4Q96J92 1243 aa26.55■■□□□ 1.84
HOMER3-206ENST00000594439 WRNIP1Q96S55 665 aa26.55■■□□□ 1.84
HOMER3-206ENST00000594439 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.55■■□□□ 1.84
HOMER3-206ENST00000594439 ZNF112Q9UJU3 913 aa26.55■■□□□ 1.84
HOMER3-206ENST00000594439 LAMB1P07942 1786 aa26.54■■□□□ 1.84
HOMER3-206ENST00000594439 ERC2O15083 957 aa26.54■■□□□ 1.84
HOMER3-206ENST00000594439 GLRX3O76003 335 aaKnown RBP26.54■■□□□ 1.84
HOMER3-206ENST00000594439 MAP3K10Q02779 954 aa26.54■■□□□ 1.84
HOMER3-206ENST00000594439 B4GALNT3Q6L9W6 998 aa26.54■■□□□ 1.84
HOMER3-206ENST00000594439 MAPKAPK5Q8IW41 473 aa26.54■■□□□ 1.84
HOMER3-206ENST00000594439 LNPKQ9C0E8 428 aa26.54■■□□□ 1.84
HOMER3-206ENST00000594439 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.54■■□□□ 1.84
HOMER3-206ENST00000594439 ELP3Q9H9T3 547 aa26.54■■□□□ 1.84
HOMER3-206ENST00000594439 FLT1P17948 1338 aa26.54■■□□□ 1.84
HOMER3-206ENST00000594439 MAGEB6P1A0A0J9YX57 407 aa26.53■■□□□ 1.84
HOMER3-206ENST00000594439 MKRN3Q13064 507 aaKnown RBP26.53■■□□□ 1.84
HOMER3-206ENST00000594439 SLFNL1Q499Z3 407 aa26.53■■□□□ 1.84
HOMER3-206ENST00000594439 STAP2Q9UGK3 403 aa26.53■■□□□ 1.84
HOMER3-206ENST00000594439 SIPA1L1O43166 1804 aa26.53■■□□□ 1.84
HOMER3-206ENST00000594439 FOXN1O15353 648 aa26.52■■□□□ 1.84
HOMER3-206ENST00000594439 CHGBP05060 677 aa26.52■■□□□ 1.84
HOMER3-206ENST00000594439 SLURP2P0DP57 97 aa26.52■■□□□ 1.84
HOMER3-206ENST00000594439 GJA5P36382 358 aa26.52■■□□□ 1.84
HOMER3-206ENST00000594439 NUCB1Q02818 461 aa26.52■■□□□ 1.84
HOMER3-206ENST00000594439 UBE3CQ15386 1083 aa26.52■■□□□ 1.84
HOMER3-206ENST00000594439 KBTBD3Q8NAB2 608 aa26.52■■□□□ 1.84
HOMER3-206ENST00000594439 ZKSCAN4Q969J2 545 aaPredicted RBP26.52■■□□□ 1.84
HOMER3-206ENST00000594439 AIDAQ96BJ3 306 aa26.52■■□□□ 1.84
HOMER3-206ENST00000594439 CSADQ9Y600 493 aa26.52■■□□□ 1.84
HOMER3-206ENST00000594439 SNCAIPQ9Y6H5 919 aa26.52■■□□□ 1.84
HOMER3-206ENST00000594439 MYH1P12882 1939 aa26.51■■□□□ 1.83
HOMER3-206ENST00000594439 ZBTB48P10074 688 aaPredicted RBP26.51■■□□□ 1.83
HOMER3-206ENST00000594439 INPP5BP32019 993 aa26.51■■□□□ 1.83
HOMER3-206ENST00000594439 CHD1LQ86WJ1 897 aa26.51■■□□□ 1.83
HOMER3-206ENST00000594439 REM2Q8IYK8 340 aaPredicted RBP26.51■■□□□ 1.83
HOMER3-206ENST00000594439 PHF20L1A8MW92 1017 aa26.5■■□□□ 1.83
HOMER3-206ENST00000594439 PDE1AP54750 535 aa26.5■■□□□ 1.83
HOMER3-206ENST00000594439 ZSCAN25Q6NSZ9 544 aa26.5■■□□□ 1.83
HOMER3-206ENST00000594439 TBC1D12O60347 775 aa26.49■■□□□ 1.83
HOMER3-206ENST00000594439 CNKSR2Q8WXI2 1034 aa26.49■■□□□ 1.83
HOMER3-206ENST00000594439 OPTNQ96CV9 577 aa26.49■■□□□ 1.83
HOMER3-206ENST00000594439 BEGAINQ9BUH8 593 aa26.49■■□□□ 1.83
HOMER3-206ENST00000594439 SPDYE5A6NIY4 337 aa26.48■■□□□ 1.83
HOMER3-206ENST00000594439 LCORLQ8N3X6 602 aa26.48■■□□□ 1.83
HOMER3-206ENST00000594439 DHX36Q9H2U1 1008 aaKnown RBP26.48■■□□□ 1.83
HOMER3-206ENST00000594439 DDX60LQ5H9U9 1706 aaKnown RBP26.48■■□□□ 1.83
HOMER3-206ENST00000594439 USP5P45974 858 aa26.47■■□□□ 1.83
HOMER3-206ENST00000594439 TM4SF4P48230 202 aa26.47■■□□□ 1.83
HOMER3-206ENST00000594439 NOL9Q5SY16 702 aaKnown RBP26.47■■□□□ 1.83
HOMER3-206ENST00000594439 CRNKL1Q9BZJ0 848 aaKnown RBP26.47■■□□□ 1.83
HOMER3-206ENST00000594439 ARMT1Q9H993 441 aa26.47■■□□□ 1.83
HOMER3-206ENST00000594439 SAP30BPQ9UHR5 308 aaKnown RBP26.47■■□□□ 1.83
HOMER3-206ENST00000594439 PALD1Q9ULE6 856 aa26.47■■□□□ 1.83
HOMER3-206ENST00000594439 NAV1Q8NEY1 1877 aa26.47■■□□□ 1.83
HOMER3-206ENST00000594439 MBD4O95243 580 aa26.46■■□□□ 1.83
HOMER3-206ENST00000594439 CTCFP49711 727 aaPredicted RBP26.46■■□□□ 1.83
HOMER3-206ENST00000594439 ERO1BQ86YB8 467 aa26.46■■□□□ 1.83
HOMER3-206ENST00000594439 PI4KBQ9UBF8 816 aa26.46■■□□□ 1.83
HOMER3-206ENST00000594439 DOCK1Q14185 1865 aa26.45■■□□□ 1.83
HOMER3-206ENST00000594439 MANSC4A6NHS7 340 aaPredicted RBP26.45■■□□□ 1.82
HOMER3-206ENST00000594439 FAM196BA6NMK8 535 aa26.45■■□□□ 1.82
HOMER3-206ENST00000594439 RNF113AO15541 343 aaKnown RBP26.45■■□□□ 1.82
HOMER3-206ENST00000594439 CA12O43570 354 aa26.45■■□□□ 1.82
HOMER3-206ENST00000594439 HSPA8P11142 646 aaKnown RBP26.45■■□□□ 1.82
HOMER3-206ENST00000594439 OTUD5Q96G74 571 aa26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms