RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 SNAP23O00161 211 aa19.01■□□□□ 0.63
LIG1-206ENST00000594067 NPHP1O15259 732 aa19.01■□□□□ 0.63
LIG1-206ENST00000594067 ARID4AP29374 1257 aaPredicted RBP19.01■□□□□ 0.63
LIG1-206ENST00000594067 HSPA2P54652 639 aa19.01■□□□□ 0.63
LIG1-206ENST00000594067 CCDC93Q567U6 631 aa19.01■□□□□ 0.63
LIG1-206ENST00000594067 TAF3Q5VWG9 929 aa19.01■□□□□ 0.63
LIG1-206ENST00000594067 EPB41L4AQ9HCS5 686 aaPredicted RBP19.01■□□□□ 0.63
LIG1-206ENST00000594067 PSDA5PKW4 1024 aaPredicted RBP19■□□□□ 0.63
LIG1-206ENST00000594067 RESP18Q5W5W9 173 aa19■□□□□ 0.63
LIG1-206ENST00000594067 ZSWIM5Q9P217 1185 aa19■□□□□ 0.63
LIG1-206ENST00000594067 ZBTB1Q9Y2K1 713 aa19■□□□□ 0.63
LIG1-206ENST00000594067 TACC3Q9Y6A5 838 aa19■□□□□ 0.63
LIG1-206ENST00000594067 IFIT3O14879 490 aaKnown RBP19■□□□□ 0.63
LIG1-206ENST00000594067 PTPN21Q16825 1174 aa19■□□□□ 0.63
LIG1-206ENST00000594067 ERCC6LQ2NKX8 1250 aa19■□□□□ 0.63
LIG1-206ENST00000594067 SPECC1Q5M775 1068 aa19■□□□□ 0.63
LIG1-206ENST00000594067 SYT10Q6XYQ8 523 aa19■□□□□ 0.63
LIG1-206ENST00000594067 SLC4A9Q96Q91 983 aa19■□□□□ 0.63
LIG1-206ENST00000594067 SOS2Q07890 1332 aaPredicted RBP19■□□□□ 0.63
LIG1-206ENST00000594067 PDE8AO60658 829 aa18.99■□□□□ 0.63
LIG1-206ENST00000594067 MBD4O95243 580 aa18.99■□□□□ 0.63
LIG1-206ENST00000594067 UQCRFS1P1P0C7P4 283 aa18.99■□□□□ 0.63
LIG1-206ENST00000594067 H2AFXP16104 143 aaPredicted RBP18.99■□□□□ 0.63
LIG1-206ENST00000594067 LONRF3Q496Y0 759 aa18.99■□□□□ 0.63
LIG1-206ENST00000594067 METTL16Q86W50 562 aaKnown RBP18.99■□□□□ 0.63
LIG1-206ENST00000594067 IFNL3Q8IZI9 196 aa18.99■□□□□ 0.63
LIG1-206ENST00000594067 MAGEB6Q8N7X4 407 aa18.99■□□□□ 0.63
LIG1-206ENST00000594067 LRRN4CLQ8ND94 238 aa18.99■□□□□ 0.63
LIG1-206ENST00000594067 RGS22Q8NE09 1264 aa18.99■□□□□ 0.63
LIG1-206ENST00000594067 NAPBQ9H115 298 aa18.99■□□□□ 0.63
LIG1-206ENST00000594067 ARMT1Q9H993 441 aa18.99■□□□□ 0.63
LIG1-206ENST00000594067 SLC12A7Q9Y666 1083 aa18.99■□□□□ 0.63
LIG1-206ENST00000594067 SERPINC1P01008 464 aa18.99■□□□□ 0.63
LIG1-206ENST00000594067 KCNJ6P48051 423 aa18.99■□□□□ 0.63
LIG1-206ENST00000594067 UBASH3AP57075 661 aa18.99■□□□□ 0.63
LIG1-206ENST00000594067 MYL5Q02045 173 aa18.99■□□□□ 0.63
LIG1-206ENST00000594067 SGMS1Q86VZ5 419 aa18.99■□□□□ 0.63
LIG1-206ENST00000594067 MYO5AQ9Y4I1 1855 aaKnown RBP18.99■□□□□ 0.63
LIG1-206ENST00000594067 SSRP1Q08945 709 aaKnown RBP18.98■□□□□ 0.63
LIG1-206ENST00000594067 PUM3Q15397 648 aaKnown RBP18.98■□□□□ 0.63
LIG1-206ENST00000594067 FOXP4Q8IVH2 680 aaPredicted RBP18.98■□□□□ 0.63
LIG1-206ENST00000594067 STK11IPQ8N1F8 1099 aa18.98■□□□□ 0.63
LIG1-206ENST00000594067 PATL2C9JE40 543 aaKnown RBP18.98■□□□□ 0.63
LIG1-206ENST00000594067 FOXN1O15353 648 aa18.98■□□□□ 0.63
LIG1-206ENST00000594067 CUTAO60888 179 aa18.98■□□□□ 0.63
LIG1-206ENST00000594067 CYP19A1P11511 503 aaPredicted RBP18.98■□□□□ 0.63
LIG1-206ENST00000594067 GUCY1A2P33402 732 aa18.98■□□□□ 0.63
LIG1-206ENST00000594067 SPATA5Q8NB90 893 aa18.98■□□□□ 0.63
LIG1-206ENST00000594067 CNNM3Q8NE01 707 aa18.98■□□□□ 0.63
LIG1-206ENST00000594067 LPIN2Q92539 896 aa18.98■□□□□ 0.63
LIG1-206ENST00000594067 ST7Q9NRC1 585 aa18.98■□□□□ 0.63
LIG1-206ENST00000594067 KCNH3Q9ULD8 1083 aa18.98■□□□□ 0.63
LIG1-206ENST00000594067 FAM237AA0A1B0GTK4 181 aa18.97■□□□□ 0.63
LIG1-206ENST00000594067 NRDCO43847 1150 aa18.97■□□□□ 0.63
LIG1-206ENST00000594067 CFAP100Q494V2 611 aa18.97■□□□□ 0.63
LIG1-206ENST00000594067 RRP12Q5JTH9 1297 aaKnown RBP18.97■□□□□ 0.63
LIG1-206ENST00000594067 KRBA2Q6ZNG9 492 aa18.97■□□□□ 0.63
LIG1-206ENST00000594067 ZKSCAN3Q9BRR0 538 aa18.97■□□□□ 0.63
LIG1-206ENST00000594067 PRKAB2O43741 272 aa18.97■□□□□ 0.63
LIG1-206ENST00000594067 GOLGA8FQ08AF8 430 aa18.97■□□□□ 0.63
LIG1-206ENST00000594067 GOLGA8DPQ0D2H9 430 aa18.97■□□□□ 0.63
LIG1-206ENST00000594067 ALX1Q15699 326 aa18.97■□□□□ 0.63
LIG1-206ENST00000594067 OLFM4Q6UX06 510 aa18.97■□□□□ 0.63
LIG1-206ENST00000594067 CCDC82Q8N4S0 544 aa18.97■□□□□ 0.63
LIG1-206ENST00000594067 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.97■□□□□ 0.63
LIG1-206ENST00000594067 TOMM22Q9NS69 142 aa18.97■□□□□ 0.63
LIG1-206ENST00000594067 PCDHA5Q9Y5H7 936 aa18.97■□□□□ 0.63
LIG1-206ENST00000594067 BTBD18B2RXH4 712 aa18.97■□□□□ 0.63
LIG1-206ENST00000594067 FGFR2P21802 821 aa18.97■□□□□ 0.63
LIG1-206ENST00000594067 KCNJ14Q9UNX9 436 aa18.97■□□□□ 0.63
LIG1-206ENST00000594067 TMEM232C9JQI7 657 aa18.96■□□□□ 0.63
LIG1-206ENST00000594067 LIFRP42702 1097 aa18.96■□□□□ 0.63
LIG1-206ENST00000594067 RASGRF1Q13972 1273 aa18.96■□□□□ 0.63
LIG1-206ENST00000594067 FANCLQ9NW38 375 aa18.96■□□□□ 0.63
LIG1-206ENST00000594067 SLAIN2Q9P270 581 aa18.96■□□□□ 0.63
LIG1-206ENST00000594067 FMNL1O95466 1100 aaPredicted RBP18.96■□□□□ 0.63
LIG1-206ENST00000594067 PDE4BQ07343 736 aa18.96■□□□□ 0.63
LIG1-206ENST00000594067 MAP3K12Q12852 859 aa18.96■□□□□ 0.63
LIG1-206ENST00000594067 HSP90AA4PQ58FG1 418 aa18.96■□□□□ 0.63
LIG1-206ENST00000594067 NOSTRINQ8IVI9 506 aa18.96■□□□□ 0.63
LIG1-206ENST00000594067 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.96■□□□□ 0.635e-7■■□□□ 14.5
LIG1-206ENST00000594067 CBFA2T2O43439 604 aa18.95■□□□□ 0.62
LIG1-206ENST00000594067 GRIN1Q05586 938 aa18.95■□□□□ 0.62
LIG1-206ENST00000594067 BMS1Q14692 1282 aaKnown RBP18.95■□□□□ 0.62
LIG1-206ENST00000594067 AKNAD1Q5T1N1 836 aa18.95■□□□□ 0.62
LIG1-206ENST00000594067 DZIP3Q86Y13 1208 aaKnown RBP18.95■□□□□ 0.62
LIG1-206ENST00000594067 HOMER1Q86YM7 354 aa18.95■□□□□ 0.62
LIG1-206ENST00000594067 CMTR1Q8N1G2 835 aaKnown RBP18.95■□□□□ 0.62
LIG1-206ENST00000594067 KRI1Q8N9T8 703 aaKnown RBP18.95■□□□□ 0.62
LIG1-206ENST00000594067 GSG1L2A8MUP6 293 aa18.95■□□□□ 0.62
LIG1-206ENST00000594067 TUBB4AP04350 444 aa18.95■□□□□ 0.62
LIG1-206ENST00000594067 MFSD6Q6ZSS7 791 aa18.95■□□□□ 0.62
LIG1-206ENST00000594067 FHOD1Q9Y613 1164 aa18.95■□□□□ 0.62
LIG1-206ENST00000594067 MROH5Q6ZUA9 1318 aa18.94■□□□□ 0.62
LIG1-206ENST00000594067 STK36Q9NRP7 1315 aa18.94■□□□□ 0.62
LIG1-206ENST00000594067 SLC5A1P13866 664 aa18.94■□□□□ 0.62
LIG1-206ENST00000594067 BMP6P22004 513 aa18.94■□□□□ 0.62
LIG1-206ENST00000594067 TOB1P50616 345 aaPredicted RBP18.94■□□□□ 0.62
LIG1-206ENST00000594067 CLCN6P51797 869 aa18.94■□□□□ 0.62
LIG1-206ENST00000594067 DHX8Q14562 1220 aaKnown RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms