RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 CACNB3P54284 484 aa16.33■□□□□ 0.2
H3F3B-213ENST00000593254 TIMM10P62072 90 aa16.33■□□□□ 0.2
H3F3B-213ENST00000593254 PPIL2Q13356 520 aa16.33■□□□□ 0.2
H3F3B-213ENST00000593254 SNAPC2Q13487 334 aa16.33■□□□□ 0.2
H3F3B-213ENST00000593254 FAM83AQ86UY5 434 aa16.33■□□□□ 0.2
H3F3B-213ENST00000593254 TRIM47Q96LD4 638 aa16.33■□□□□ 0.2
H3F3B-213ENST00000593254 TMOD2Q9NZR1 351 aa16.33■□□□□ 0.2
H3F3B-213ENST00000593254 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.33■□□□□ 0.2
H3F3B-213ENST00000593254 PDS5AQ29RF7 1337 aaKnown RBP16.33■□□□□ 0.2
H3F3B-213ENST00000593254 AK9Q5TCS8 1911 aa16.33■□□□□ 0.2
H3F3B-213ENST00000593254 LDHBP07195 334 aaKnown RBP16.32■□□□□ 0.2
H3F3B-213ENST00000593254 GJB1P08034 283 aa16.32■□□□□ 0.2
H3F3B-213ENST00000593254 RLBP1P12271 317 aa16.32■□□□□ 0.2
H3F3B-213ENST00000593254 RASGRF1Q13972 1273 aa16.32■□□□□ 0.2
H3F3B-213ENST00000593254 FTSJ3Q8IY81 847 aaKnown RBP16.32■□□□□ 0.2
H3F3B-213ENST00000593254 SLC17A8Q8NDX2 589 aa16.32■□□□□ 0.2
H3F3B-213ENST00000593254 XAGE2Q96GT9 111 aa16.32■□□□□ 0.2
H3F3B-213ENST00000593254 ADGRA2Q96PE1 1338 aa16.32■□□□□ 0.2
H3F3B-213ENST00000593254 RPAP1Q9BWH6 1393 aaPredicted RBP16.32■□□□□ 0.2
H3F3B-213ENST00000593254 DAGLAQ9Y4D2 1042 aa16.32■□□□□ 0.2
H3F3B-213ENST00000593254 GRK4P32298 578 aa16.31■□□□□ 0.2
H3F3B-213ENST00000593254 PSMC4P43686 418 aa16.31■□□□□ 0.2
H3F3B-213ENST00000593254 DIXDC1Q155Q3 683 aa16.31■□□□□ 0.2
H3F3B-213ENST00000593254 ZKSCAN4Q969J2 545 aaPredicted RBP16.31■□□□□ 0.2
H3F3B-213ENST00000593254 WRNIP1Q96S55 665 aa16.31■□□□□ 0.2
H3F3B-213ENST00000593254 HTATIP2Q9BUP3 242 aa16.31■□□□□ 0.2
H3F3B-213ENST00000593254 ZBTB7BO15156 539 aaPredicted RBP16.3■□□□□ 0.2
H3F3B-213ENST00000593254 OSBPP22059 807 aa16.3■□□□□ 0.2
H3F3B-213ENST00000593254 POLA2Q14181 598 aa16.3■□□□□ 0.2
H3F3B-213ENST00000593254 MVPQ14764 893 aaKnown RBP16.3■□□□□ 0.2
H3F3B-213ENST00000593254 ZGPATQ8N5A5 531 aaKnown RBP16.3■□□□□ 0.2
H3F3B-213ENST00000593254 SSH3Q8TE77 659 aa16.3■□□□□ 0.2
H3F3B-213ENST00000593254 CPA4Q9UI42 421 aa16.3■□□□□ 0.2
H3F3B-213ENST00000593254 MGAMO43451 1857 aa16.3■□□□□ 0.2
H3F3B-213ENST00000593254 A0A1W2PPC1 479 aa16.29■□□□□ 0.2
H3F3B-213ENST00000593254 CCL5P13501 91 aa16.29■□□□□ 0.2
H3F3B-213ENST00000593254 HOXD10P28358 340 aa16.29■□□□□ 0.2
H3F3B-213ENST00000593254 PPATQ06203 517 aa16.29■□□□□ 0.2
H3F3B-213ENST00000593254 G3BP1Q13283 466 aaKnown RBP eCLIP16.29■□□□□ 0.22e-8■□□□□ 10.3
H3F3B-213ENST00000593254 CDC42EP5Q6NZY7 148 aa16.29■□□□□ 0.2
H3F3B-213ENST00000593254 ANKRD23Q86SG2 305 aa16.29■□□□□ 0.2
H3F3B-213ENST00000593254 ITPRIPQ8IWB1 547 aa16.29■□□□□ 0.2
H3F3B-213ENST00000593254 RAET1EQ8TD07 263 aa16.29■□□□□ 0.2
H3F3B-213ENST00000593254 VCANP13611 3396 aa16.28■□□□□ 0.2
H3F3B-213ENST00000593254 ATP8B2P98198 1209 aa16.28■□□□□ 0.2
H3F3B-213ENST00000593254 HOOK2Q96ED9 719 aa16.28■□□□□ 0.2
H3F3B-213ENST00000593254 NEUROD6Q96NK8 337 aa16.28■□□□□ 0.2
H3F3B-213ENST00000593254 RNF208Q9H0X6 261 aa16.28■□□□□ 0.2
H3F3B-213ENST00000593254 C1orf115Q9H7X2 142 aa16.28■□□□□ 0.2
H3F3B-213ENST00000593254 NR2E3Q9Y5X4 410 aa16.28■□□□□ 0.2
H3F3B-213ENST00000593254 GAKO14976 1311 aa16.27■□□□□ 0.2
H3F3B-213ENST00000593254 MYPNQ86TC9 1320 aa16.27■□□□□ 0.2
H3F3B-213ENST00000593254 LAMA2P24043 3122 aaKnown RBP16.27■□□□□ 0.2
H3F3B-213ENST00000593254 PDHXO00330 501 aa16.27■□□□□ 0.2
H3F3B-213ENST00000593254 SOX1O00570 391 aaPredicted RBP16.27■□□□□ 0.2
H3F3B-213ENST00000593254 ECM2O94769 699 aaPredicted RBP16.27■□□□□ 0.2
H3F3B-213ENST00000593254 MOGSQ13724 837 aa16.27■□□□□ 0.2
H3F3B-213ENST00000593254 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.27■□□□□ 0.2
H3F3B-213ENST00000593254 FAM151AQ8WW52 585 aa16.27■□□□□ 0.2
H3F3B-213ENST00000593254 KCNH4Q9UQ05 1017 aa16.27■□□□□ 0.2
H3F3B-213ENST00000593254 DOCK2Q92608 1830 aa16.26■□□□□ 0.19
H3F3B-213ENST00000593254 ALPK3Q96L96 1907 aa16.26■□□□□ 0.19
H3F3B-213ENST00000593254 FMNL1O95466 1100 aaPredicted RBP16.26■□□□□ 0.19
H3F3B-213ENST00000593254 ARID4AP29374 1257 aaPredicted RBP16.26■□□□□ 0.19
H3F3B-213ENST00000593254 NFIAQ12857 509 aa16.26■□□□□ 0.19
H3F3B-213ENST00000593254 DZIP1Q86YF9 867 aaKnown RBP16.26■□□□□ 0.19
H3F3B-213ENST00000593254 U2AF1L4Q8WU68 220 aaKnown RBP16.26■□□□□ 0.19
H3F3B-213ENST00000593254 GPR108Q9NPR9 543 aa16.26■□□□□ 0.19
H3F3B-213ENST00000593254 HMG20BQ9P0W2 317 aa16.26■□□□□ 0.19
H3F3B-213ENST00000593254 ABCF2Q9UG63 623 aa16.26■□□□□ 0.19
H3F3B-213ENST00000593254 FARP2O94887 1054 aaPredicted RBP16.25■□□□□ 0.19
H3F3B-213ENST00000593254 BCRP11274 1271 aa16.25■□□□□ 0.19
H3F3B-213ENST00000593254 INPP5BP32019 993 aa16.25■□□□□ 0.19
H3F3B-213ENST00000593254 UBXN2AP68543 259 aa16.25■□□□□ 0.19
H3F3B-213ENST00000593254 PRKCZQ05513 592 aa16.25■□□□□ 0.19
H3F3B-213ENST00000593254 GORABQ5T7V8 394 aa16.25■□□□□ 0.19
H3F3B-213ENST00000593254 DCAF15Q66K64 600 aa16.25■□□□□ 0.19
H3F3B-213ENST00000593254 SPTY2D1Q68D10 685 aaPredicted RBP16.25■□□□□ 0.19
H3F3B-213ENST00000593254 POTEHQ6S545 545 aa16.25■□□□□ 0.19
H3F3B-213ENST00000593254 FAM163AQ96GL9 167 aaPredicted RBP16.25■□□□□ 0.19
H3F3B-213ENST00000593254 ZNF341Q9BYN7 854 aa16.25■□□□□ 0.19
H3F3B-213ENST00000593254 USP40Q9NVE5 1235 aa16.25■□□□□ 0.19
H3F3B-213ENST00000593254 FAM198AQ9UFP1 575 aa16.25■□□□□ 0.19
H3F3B-213ENST00000593254 ZNF112Q9UJU3 913 aa16.25■□□□□ 0.19
H3F3B-213ENST00000593254 RFX7Q2KHR2 1363 aa16.25■□□□□ 0.19
H3F3B-213ENST00000593254 DOCK3Q8IZD9 2030 aa16.24■□□□□ 0.19
H3F3B-213ENST00000593254 SURF6O75683 361 aaKnown RBP16.24■□□□□ 0.19
H3F3B-213ENST00000593254 SGPL1O95470 568 aa16.24■□□□□ 0.19
H3F3B-213ENST00000593254 TCP10Q12799 353 aa16.24■□□□□ 0.19
H3F3B-213ENST00000593254 TNNI3KQ59H18 835 aa16.24■□□□□ 0.19
H3F3B-213ENST00000593254 PI16Q6UXB8 463 aa16.24■□□□□ 0.19
H3F3B-213ENST00000593254 SLF2Q8IX21 1173 aa16.24■□□□□ 0.19
H3F3B-213ENST00000593254 SPATA5Q8NB90 893 aa16.24■□□□□ 0.19
H3F3B-213ENST00000593254 SLAIN1Q8ND83 568 aa16.24■□□□□ 0.19
H3F3B-213ENST00000593254 PANK1Q8TE04 598 aa16.24■□□□□ 0.19
H3F3B-213ENST00000593254 IDI2Q9BXS1 227 aa16.24■□□□□ 0.19
H3F3B-213ENST00000593254 UNC93B1Q9H1C4 597 aa16.24■□□□□ 0.19
H3F3B-213ENST00000593254 NOP58Q9Y2X3 529 aaKnown RBP16.24■□□□□ 0.19
H3F3B-213ENST00000593254 FPGT-TNNI3KV9GXZ4 949 aa16.24■□□□□ 0.19
H3F3B-213ENST00000593254 MYO5AQ9Y4I1 1855 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms