RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 FAM163AQ96GL9 167 aaPredicted RBP25.28■■□□□ 1.64
TRIM47-207ENST00000593089 ZNF333Q96JL9 665 aa25.28■■□□□ 1.64
TRIM47-207ENST00000593089 DDX4Q9NQI0 724 aaKnown RBP25.28■■□□□ 1.64
TRIM47-207ENST00000593089 HMG20BQ9P0W2 317 aa25.28■■□□□ 1.64
TRIM47-207ENST00000593089 DDTLA6NHG4 134 aaPredicted RBP25.27■■□□□ 1.64
TRIM47-207ENST00000593089 PHF20L1A8MW92 1017 aa25.27■■□□□ 1.64
TRIM47-207ENST00000593089 EN2P19622 333 aaPredicted RBP25.27■■□□□ 1.64
TRIM47-207ENST00000593089 MOGSQ13724 837 aa25.27■■□□□ 1.64
TRIM47-207ENST00000593089 C17orf99Q6UX52 265 aa25.27■■□□□ 1.64
TRIM47-207ENST00000593089 PI16Q6UXB8 463 aa25.27■■□□□ 1.64
TRIM47-207ENST00000593089 NBPF11Q86T75 865 aa25.27■■□□□ 1.64
TRIM47-207ENST00000593089 TMEM57Q8N5G2 664 aa25.27■■□□□ 1.64
TRIM47-207ENST00000593089 TMEM106CQ9BVX2 250 aa25.27■■□□□ 1.64
TRIM47-207ENST00000593089 SLURP2P0DP57 97 aa25.26■■□□□ 1.63
TRIM47-207ENST00000593089 TBC1D9Q6ZT07 1266 aa25.26■■□□□ 1.63
TRIM47-207ENST00000593089 SCYL3Q8IZE3 742 aa25.26■■□□□ 1.63
TRIM47-207ENST00000593089 SPATA5Q8NB90 893 aa25.26■■□□□ 1.63
TRIM47-207ENST00000593089 KIAA0100Q14667 2235 aaKnown RBP25.25■■□□□ 1.63
TRIM47-207ENST00000593089 MYCP01106 439 aaPredicted RBP25.25■■□□□ 1.63
TRIM47-207ENST00000593089 ZKSCAN2Q63HK3 967 aa25.25■■□□□ 1.63
TRIM47-207ENST00000593089 ZNF384Q8TF68 577 aa25.25■■□□□ 1.63
TRIM47-207ENST00000593089 PICK1Q9NRD5 415 aa25.25■■□□□ 1.63
TRIM47-207ENST00000593089 GPR75-ASB3A0A0A6YYF3 556 aa25.24■■□□□ 1.63
TRIM47-207ENST00000593089 CXCL11O14625 94 aa25.24■■□□□ 1.63
TRIM47-207ENST00000593089 SH3TC2Q8TF17 1288 aa25.24■■□□□ 1.63
TRIM47-207ENST00000593089 ZHX2Q9Y6X8 837 aa25.24■■□□□ 1.63
TRIM47-207ENST00000593089 DOCK1Q14185 1865 aa25.23■■□□□ 1.63
TRIM47-207ENST00000593089 ADGRA2Q96PE1 1338 aa25.23■■□□□ 1.63
TRIM47-207ENST00000593089 GNRH1P01148 92 aa25.23■■□□□ 1.63
TRIM47-207ENST00000593089 PTPRAP18433 802 aa25.23■■□□□ 1.63
TRIM47-207ENST00000593089 ARID4AP29374 1257 aaPredicted RBP25.23■■□□□ 1.63
TRIM47-207ENST00000593089 RHBDL3P58872 404 aa25.23■■□□□ 1.63
TRIM47-207ENST00000593089 NSUN4Q96CB9 384 aaKnown RBP25.23■■□□□ 1.63
TRIM47-207ENST00000593089 RAI14Q9P0K7 980 aa25.23■■□□□ 1.63
TRIM47-207ENST00000593089 CTGFP29279 349 aa25.22■■□□□ 1.63
TRIM47-207ENST00000593089 GSTO1P78417 241 aa25.22■■□□□ 1.63
TRIM47-207ENST00000593089 HNRNPUQ00839 825 aaKnown RBP eCLIP25.22■■□□□ 1.63
TRIM47-207ENST00000593089 MAP3K10Q02779 954 aa25.22■■□□□ 1.63
TRIM47-207ENST00000593089 SLC4A8Q2Y0W8 1093 aa25.22■■□□□ 1.63
TRIM47-207ENST00000593089 GPAT2Q6NUI2 795 aa25.22■■□□□ 1.63
TRIM47-207ENST00000593089 LDHCP07864 332 aa25.21■■□□□ 1.63
TRIM47-207ENST00000593089 CYP2C8P10632 490 aa25.21■■□□□ 1.63
TRIM47-207ENST00000593089 MCAMP43121 646 aa25.21■■□□□ 1.63
TRIM47-207ENST00000593089 PSMC4P43686 418 aa25.21■■□□□ 1.63
TRIM47-207ENST00000593089 TRIM47Q96LD4 638 aa25.21■■□□□ 1.63
TRIM47-207ENST00000593089 PARK7Q99497 189 aaKnown RBP25.21■■□□□ 1.63
TRIM47-207ENST00000593089 UQCRFS1P1P0C7P4 283 aa25.2■■□□□ 1.62
TRIM47-207ENST00000593089 PRMT2P55345 433 aa25.2■■□□□ 1.62
TRIM47-207ENST00000593089 GADL1Q6ZQY3 521 aa25.2■■□□□ 1.62
TRIM47-207ENST00000593089 AFG3L2Q9Y4W6 797 aa25.2■■□□□ 1.62
TRIM47-207ENST00000593089 PHIPQ8WWQ0 1821 aa25.2■■□□□ 1.62
TRIM47-207ENST00000593089 BRCA2P51587 3418 aa25.2■■□□□ 1.62
TRIM47-207ENST00000593089 A0A0G2JLL6 359 aaPredicted RBP25.19■■□□□ 1.62
TRIM47-207ENST00000593089 CTNND1O60716 968 aaKnown RBP25.19■■□□□ 1.62
TRIM47-207ENST00000593089 FMNL1O95466 1100 aaPredicted RBP25.19■■□□□ 1.62
TRIM47-207ENST00000593089 OS9Q13438 667 aaPredicted RBP25.19■■□□□ 1.62
TRIM47-207ENST00000593089 FASTKD5Q7L8L6 764 aaKnown RBP25.19■■□□□ 1.62
TRIM47-207ENST00000593089 PRRT2Q7Z6L0 340 aaPredicted RBP25.19■■□□□ 1.62
TRIM47-207ENST00000593089 C1orf115Q9H7X2 142 aa25.19■■□□□ 1.62
TRIM47-207ENST00000593089 LRP2BPQ9P2M1 347 aa25.19■■□□□ 1.62
TRIM47-207ENST00000593089 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.19■■□□□ 1.62
TRIM47-207ENST00000593089 PTPRFP10586 1907 aa25.19■■□□□ 1.62
TRIM47-207ENST00000593089 FAM196BA6NMK8 535 aa25.18■■□□□ 1.62
TRIM47-207ENST00000593089 OSBPP22059 807 aa25.18■■□□□ 1.62
TRIM47-207ENST00000593089 POLA2Q14181 598 aa25.18■■□□□ 1.62
TRIM47-207ENST00000593089 CCDC84Q86UT8 332 aaPredicted RBP25.18■■□□□ 1.62
TRIM47-207ENST00000593089 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.18■■□□□ 1.62
TRIM47-207ENST00000593089 SNRKQ9NRH2 765 aa25.18■■□□□ 1.62
TRIM47-207ENST00000593089 SRRDQ9UH36 339 aa25.18■■□□□ 1.62
TRIM47-207ENST00000593089 TRIM75PA6NK02 468 aa25.17■■□□□ 1.62
TRIM47-207ENST00000593089 HOXD10P28358 340 aa25.17■■□□□ 1.62
TRIM47-207ENST00000593089 ATP8B2P98198 1209 aa25.17■■□□□ 1.62
TRIM47-207ENST00000593089 TNNI3KQ59H18 835 aa25.17■■□□□ 1.62
TRIM47-207ENST00000593089 TTC39AQ5SRH9 613 aa25.17■■□□□ 1.62
TRIM47-207ENST00000593089 FTSJ3Q8IY81 847 aaKnown RBP25.17■■□□□ 1.62
TRIM47-207ENST00000593089 FPGT-TNNI3KV9GXZ4 949 aa25.17■■□□□ 1.62
TRIM47-207ENST00000593089 MKI67P46013 3256 aaKnown RBP25.16■■□□□ 1.62
TRIM47-207ENST00000593089 MGAMO43451 1857 aa25.16■■□□□ 1.62
TRIM47-207ENST00000593089 TBC1D12O60347 775 aa25.16■■□□□ 1.62
TRIM47-207ENST00000593089 NPM3O75607 178 aaKnown RBP25.16■■□□□ 1.62
TRIM47-207ENST00000593089 SURF6O75683 361 aaKnown RBP25.16■■□□□ 1.62
TRIM47-207ENST00000593089 MAP4K4O95819 1239 aaPredicted RBP25.16■■□□□ 1.62
TRIM47-207ENST00000593089 BCRP11274 1271 aa25.16■■□□□ 1.62
TRIM47-207ENST00000593089 MIER1Q8N108 512 aa25.16■■□□□ 1.62
TRIM47-207ENST00000593089 RAET1EQ8TD07 263 aa25.16■■□□□ 1.62
TRIM47-207ENST00000593089 SSH3Q8TE77 659 aa25.16■■□□□ 1.62
TRIM47-207ENST00000593089 DBNDD2Q9BQY9 259 aa25.16■■□□□ 1.62
TRIM47-207ENST00000593089 GPR108Q9NPR9 543 aa25.16■■□□□ 1.62
TRIM47-207ENST00000593089 MYPNQ86TC9 1320 aa25.15■■□□□ 1.62
TRIM47-207ENST00000593089 CCDC158Q5M9N0 1113 aa25.15■■□□□ 1.62
TRIM47-207ENST00000593089 ITPRIPQ8IWB1 547 aa25.15■■□□□ 1.62
TRIM47-207ENST00000593089 TEX11Q8IYF3 940 aa25.15■■□□□ 1.62
TRIM47-207ENST00000593089 OSBPL5Q9H0X9 879 aaPredicted RBP25.15■■□□□ 1.62
TRIM47-207ENST00000593089 MAST2Q6P0Q8 1798 aa25.15■■□□□ 1.62
TRIM47-207ENST00000593089 ATAD5Q96QE3 1844 aa25.14■■□□□ 1.62
TRIM47-207ENST00000593089 SH3RF3Q8TEJ3 882 aaPredicted RBP25.14■■□□□ 1.62
TRIM47-207ENST00000593089 NOL10Q9BSC4 688 aaKnown RBP25.14■■□□□ 1.62
TRIM47-207ENST00000593089 COL2A1P02458 1487 aaPredicted RBP25.14■■□□□ 1.61
TRIM47-207ENST00000593089 FCGRTP55899 365 aa25.13■■□□□ 1.61
TRIM47-207ENST00000593089 SLC45A1Q9Y2W3 748 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms