RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 LDHCP07864 332 aa16.35■□□□□ 0.21
APOC1-209ENST00000592885 MAP3K10Q02779 954 aa16.35■□□□□ 0.21
APOC1-209ENST00000592885 KIF22Q14807 665 aa16.35■□□□□ 0.21
APOC1-209ENST00000592885 DIEXFQ68CQ4 756 aaKnown RBP16.35■□□□□ 0.21
APOC1-209ENST00000592885 MIER1Q8N108 512 aa16.35■□□□□ 0.21
APOC1-209ENST00000592885 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.35■□□□□ 0.21
APOC1-209ENST00000592885 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.35■□□□□ 0.21
APOC1-209ENST00000592885 TNRC18O15417 2968 aaPredicted RBP16.34■□□□□ 0.21
APOC1-209ENST00000592885 CXCL11O14625 94 aa16.34■□□□□ 0.21
APOC1-209ENST00000592885 ATP8B2P98198 1209 aa16.34■□□□□ 0.21
APOC1-209ENST00000592885 SCYL3Q8IZE3 742 aa16.34■□□□□ 0.21
APOC1-209ENST00000592885 PICK1Q9NRD5 415 aa16.34■□□□□ 0.21
APOC1-209ENST00000592885 PTPRFP10586 1907 aa16.34■□□□□ 0.21
APOC1-209ENST00000592885 PHIPQ8WWQ0 1821 aa16.33■□□□□ 0.21
APOC1-209ENST00000592885 PHF20L1A8MW92 1017 aa16.33■□□□□ 0.2
APOC1-209ENST00000592885 MCAMP43121 646 aa16.33■□□□□ 0.2
APOC1-209ENST00000592885 PRMT2P55345 433 aa16.33■□□□□ 0.2
APOC1-209ENST00000592885 RHBDL3P58872 404 aa16.33■□□□□ 0.2
APOC1-209ENST00000592885 LACTBP83111 547 aaPredicted RBP16.33■□□□□ 0.2
APOC1-209ENST00000592885 TNNI3KQ59H18 835 aa16.33■□□□□ 0.2
APOC1-209ENST00000592885 ZSCAN29Q8IWY8 852 aaPredicted RBP16.33■□□□□ 0.2
APOC1-209ENST00000592885 ZFPM1Q8IX07 1006 aa16.33■□□□□ 0.2
APOC1-209ENST00000592885 NSUN4Q96CB9 384 aaKnown RBP16.33■□□□□ 0.2
APOC1-209ENST00000592885 FPGT-TNNI3KV9GXZ4 949 aa16.33■□□□□ 0.2
APOC1-209ENST00000592885 TBC1D12O60347 775 aa16.32■□□□□ 0.2
APOC1-209ENST00000592885 CTNND1O60716 968 aaKnown RBP16.32■□□□□ 0.2
APOC1-209ENST00000592885 HTTP42858 3142 aa16.32■□□□□ 0.2
APOC1-209ENST00000592885 OS9Q13438 667 aaPredicted RBP16.32■□□□□ 0.2
APOC1-209ENST00000592885 CCDC158Q5M9N0 1113 aa16.32■□□□□ 0.2
APOC1-209ENST00000592885 PRPF38BQ5VTL8 546 aaKnown RBP16.32■□□□□ 0.2
APOC1-209ENST00000592885 FOCADQ5VW36 1801 aa16.32■□□□□ 0.2
APOC1-209ENST00000592885 SH3BP5LQ7L8J4 393 aa16.32■□□□□ 0.2
APOC1-209ENST00000592885 ITPRIPQ8IWB1 547 aa16.32■□□□□ 0.2
APOC1-209ENST00000592885 ZNF384Q8TF68 577 aa16.32■□□□□ 0.2
APOC1-209ENST00000592885 ZNF512BQ96KM6 892 aaPredicted RBP16.32■□□□□ 0.2
APOC1-209ENST00000592885 ADGRA2Q96PE1 1338 aa16.32■□□□□ 0.2
APOC1-209ENST00000592885 PARK7Q99497 189 aaKnown RBP16.32■□□□□ 0.2
APOC1-209ENST00000592885 DDX4Q9NQI0 724 aaKnown RBP16.32■□□□□ 0.2
APOC1-209ENST00000592885 ZSWIM8A7E2V4 1837 aa16.31■□□□□ 0.2
APOC1-209ENST00000592885 DDTLA6NHG4 134 aaPredicted RBP16.31■□□□□ 0.2
APOC1-209ENST00000592885 PDHXO00330 501 aa16.31■□□□□ 0.2
APOC1-209ENST00000592885 PTPRAP18433 802 aa16.31■□□□□ 0.2
APOC1-209ENST00000592885 CAP1Q01518 475 aa16.31■□□□□ 0.2
APOC1-209ENST00000592885 PICALMQ13492 652 aa16.31■□□□□ 0.2
APOC1-209ENST00000592885 MOGSQ13724 837 aa16.31■□□□□ 0.2
APOC1-209ENST00000592885 TTC39AQ5SRH9 613 aa16.31■□□□□ 0.2
APOC1-209ENST00000592885 C17orf99Q6UX52 265 aa16.31■□□□□ 0.2
APOC1-209ENST00000592885 PI16Q6UXB8 463 aa16.31■□□□□ 0.2
APOC1-209ENST00000592885 NBPF11Q86T75 865 aa16.31■□□□□ 0.2
APOC1-209ENST00000592885 RAI14Q9P0K7 980 aa16.31■□□□□ 0.2
APOC1-209ENST00000592885 NOP58Q9Y2X3 529 aaKnown RBP16.31■□□□□ 0.2
APOC1-209ENST00000592885 ATAD5Q96QE3 1844 aa16.31■□□□□ 0.2
APOC1-209ENST00000592885 A0A0G2JLL6 359 aaPredicted RBP16.3■□□□□ 0.2
APOC1-209ENST00000592885 ZBTB7BO15156 539 aaPredicted RBP16.3■□□□□ 0.2
APOC1-209ENST00000592885 SLC9C1Q4G0N8 1177 aa16.3■□□□□ 0.2
APOC1-209ENST00000592885 FASTKD5Q7L8L6 764 aaKnown RBP16.3■□□□□ 0.2
APOC1-209ENST00000592885 PRRT2Q7Z6L0 340 aaPredicted RBP16.3■□□□□ 0.2
APOC1-209ENST00000592885 ZNF333Q96JL9 665 aa16.3■□□□□ 0.2
APOC1-209ENST00000592885 NOL10Q9BSC4 688 aaKnown RBP16.3■□□□□ 0.2
APOC1-209ENST00000592885 LRP2BPQ9P2M1 347 aa16.3■□□□□ 0.2
APOC1-209ENST00000592885 SLC45A1Q9Y2W3 748 aa16.3■□□□□ 0.2
APOC1-209ENST00000592885 PTCH2Q9Y6C5 1203 aa16.3■□□□□ 0.2
APOC1-209ENST00000592885 CDK5RAP2Q96SN8 1893 aa16.29■□□□□ 0.2
APOC1-209ENST00000592885 LOC285556D6RIA3 1793 aa16.29■□□□□ 0.2
APOC1-209ENST00000592885 SURF6O75683 361 aaKnown RBP16.29■□□□□ 0.2
APOC1-209ENST00000592885 PLCG2P16885 1265 aa16.29■□□□□ 0.2
APOC1-209ENST00000592885 TBC1D9Q6ZT07 1266 aa16.29■□□□□ 0.2
APOC1-209ENST00000592885 TBC1D2Q9BYX2 928 aa16.29■□□□□ 0.2
APOC1-209ENST00000592885 OSBPL5Q9H0X9 879 aaPredicted RBP16.29■□□□□ 0.2
APOC1-209ENST00000592885 AFG3L2Q9Y4W6 797 aa16.29■□□□□ 0.2
APOC1-209ENST00000592885 BAG3O95817 575 aa16.28■□□□□ 0.2
APOC1-209ENST00000592885 MS4A1P11836 297 aa16.28■□□□□ 0.2
APOC1-209ENST00000592885 RLBP1P12271 317 aa16.28■□□□□ 0.2
APOC1-209ENST00000592885 HOXD10P28358 340 aa16.28■□□□□ 0.2
APOC1-209ENST00000592885 DBNDD2Q9BQY9 259 aa16.28■□□□□ 0.2
APOC1-209ENST00000592885 TMEM106CQ9BVX2 250 aa16.28■□□□□ 0.2
APOC1-209ENST00000592885 C1orf115Q9H7X2 142 aa16.28■□□□□ 0.2
APOC1-209ENST00000592885 ZHX2Q9Y6X8 837 aa16.28■□□□□ 0.2
APOC1-209ENST00000592885 MGAMO43451 1857 aa16.28■□□□□ 0.2
APOC1-209ENST00000592885 SIPA1L1O43166 1804 aa16.27■□□□□ 0.2
APOC1-209ENST00000592885 POTEFA5A3E0 1075 aa16.27■□□□□ 0.2
APOC1-209ENST00000592885 SLC34A2O95436 690 aa16.27■□□□□ 0.2
APOC1-209ENST00000592885 NAA16Q6N069 864 aaPredicted RBP16.27■□□□□ 0.2
APOC1-209ENST00000592885 GPAT2Q6NUI2 795 aa16.27■□□□□ 0.2
APOC1-209ENST00000592885 TMED8Q6PL24 325 aaPredicted RBP16.27■□□□□ 0.2
APOC1-209ENST00000592885 ERC1Q8IUD2 1116 aa16.27■□□□□ 0.2
APOC1-209ENST00000592885 TEX11Q8IYF3 940 aa16.27■□□□□ 0.2
APOC1-209ENST00000592885 ARHGAP39Q9C0H5 1083 aa16.27■□□□□ 0.2
APOC1-209ENST00000592885 DHX36Q9H2U1 1008 aaKnown RBP16.27■□□□□ 0.2
APOC1-209ENST00000592885 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.27■□□□□ 0.2
APOC1-209ENST00000592885 CPA4Q9UI42 421 aa16.27■□□□□ 0.2
APOC1-209ENST00000592885 HERC5Q9UII4 1024 aaKnown RBP16.27■□□□□ 0.2
APOC1-209ENST00000592885 BCRP11274 1271 aa16.26■□□□□ 0.19
APOC1-209ENST00000592885 PPP4CP60510 307 aa16.26■□□□□ 0.19
APOC1-209ENST00000592885 CEP85Q6P2H3 762 aa16.26■□□□□ 0.19
APOC1-209ENST00000592885 CERS3Q8IU89 383 aa16.26■□□□□ 0.19
APOC1-209ENST00000592885 MYO5AQ9Y4I1 1855 aaKnown RBP16.26■□□□□ 0.19
APOC1-209ENST00000592885 KIAA0100Q14667 2235 aaKnown RBP16.25■□□□□ 0.19
APOC1-209ENST00000592885 PSMC4P43686 418 aa16.25■□□□□ 0.19
APOC1-209ENST00000592885 SH3RF3Q8TEJ3 882 aaPredicted RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms