RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 C6orf229H3BNL8 230 aa6.81□□□□□ -1.32
ERCC1-216ENST00000592444 TLL1O43897 1013 aa6.81□□□□□ -1.32
ERCC1-216ENST00000592444 U2AF1L5P0DN76 240 aaPredicted RBP6.81□□□□□ -1.32
ERCC1-216ENST00000592444 GTF2A2P52657 109 aa6.81□□□□□ -1.32
ERCC1-216ENST00000592444 COPS2P61201 443 aa6.81□□□□□ -1.32
ERCC1-216ENST00000592444 U2AF1Q01081 240 aaKnown RBP eCLIP6.81□□□□□ -1.32
ERCC1-216ENST00000592444 ANKRD13AQ8IZ07 590 aa6.81□□□□□ -1.32
ERCC1-216ENST00000592444 KCNV2Q8TDN2 545 aa6.81□□□□□ -1.32
ERCC1-216ENST00000592444 PXYLP1Q8TE99 480 aa6.81□□□□□ -1.32
ERCC1-216ENST00000592444 NLRP3Q96P20 1036 aa6.81□□□□□ -1.32
ERCC1-216ENST00000592444 ZNF292O60281 2723 aa6.8□□□□□ -1.32
ERCC1-216ENST00000592444 BTBD19C9JJ37 291 aa6.8□□□□□ -1.32
ERCC1-216ENST00000592444 USP2O75604 605 aaPredicted RBP6.8□□□□□ -1.32
ERCC1-216ENST00000592444 SASH1O94885 1247 aa6.8□□□□□ -1.32
ERCC1-216ENST00000592444 IREB2P48200 963 aaKnown RBP6.8□□□□□ -1.32
ERCC1-216ENST00000592444 FLT3LGP49771 235 aa6.8□□□□□ -1.32
ERCC1-216ENST00000592444 MYO9BQ13459 2157 aa6.8□□□□□ -1.32
ERCC1-216ENST00000592444 APOBEC3FQ8IUX4 373 aaKnown RBP6.8□□□□□ -1.32
ERCC1-216ENST00000592444 AEBP1Q8IUX7 1158 aa6.8□□□□□ -1.32
ERCC1-216ENST00000592444 PRSS33Q8NF86 280 aa6.8□□□□□ -1.32
ERCC1-216ENST00000592444 TIFAQ96CG3 184 aa6.8□□□□□ -1.32
ERCC1-216ENST00000592444 POLLQ9UGP5 575 aa6.8□□□□□ -1.32
ERCC1-216ENST00000592444 NSFL1CQ9UNZ2 370 aaKnown RBP6.8□□□□□ -1.32
ERCC1-216ENST00000592444 DDX60Q8IY21 1712 aaKnown RBP6.79□□□□□ -1.32
ERCC1-216ENST00000592444 ZNF318Q5VUA4 2279 aa6.79□□□□□ -1.32
ERCC1-216ENST00000592444 GPR179Q6PRD1 2367 aa6.79□□□□□ -1.32
ERCC1-216ENST00000592444 ERC2O15083 957 aa6.79□□□□□ -1.32
ERCC1-216ENST00000592444 COL6A1P12109 1028 aa6.79□□□□□ -1.32
ERCC1-216ENST00000592444 FCGRTP55899 365 aa6.79□□□□□ -1.32
ERCC1-216ENST00000592444 PTGDRQ13258 359 aa6.79□□□□□ -1.32
ERCC1-216ENST00000592444 SKIV2LQ15477 1246 aaKnown RBP6.79□□□□□ -1.32
ERCC1-216ENST00000592444 MICALL1Q8N3F8 863 aa6.79□□□□□ -1.32
ERCC1-216ENST00000592444 PRR14Q9BWN1 585 aa6.79□□□□□ -1.32
ERCC1-216ENST00000592444 DEFB129Q9H1M3 183 aa6.79□□□□□ -1.32
ERCC1-216ENST00000592444 PRKAG2Q9UGJ0 569 aa6.79□□□□□ -1.32
ERCC1-216ENST00000592444 OGDHLQ9ULD0 1010 aa6.79□□□□□ -1.32
ERCC1-216ENST00000592444 NCOR2Q9Y618 2525 aa6.79□□□□□ -1.32
ERCC1-216ENST00000592444 LRRC37A2A6NM11 1700 aa6.79□□□□□ -1.32
ERCC1-216ENST00000592444 DGAT1O75907 488 aa6.78□□□□□ -1.32
ERCC1-216ENST00000592444 GPTP24298 496 aa6.78□□□□□ -1.32
ERCC1-216ENST00000592444 SUSD4Q5VX71 490 aa6.78□□□□□ -1.32
ERCC1-216ENST00000592444 ZNF790Q6PG37 636 aa6.78□□□□□ -1.32
ERCC1-216ENST00000592444 BADQ92934 168 aa6.78□□□□□ -1.32
ERCC1-216ENST00000592444 RNPC3Q96LT9 517 aaKnown RBP6.78□□□□□ -1.32
ERCC1-216ENST00000592444 EYA3Q99504 573 aa6.78□□□□□ -1.32
ERCC1-216ENST00000592444 ZCCHC17Q9NP64 241 aaKnown RBP6.78□□□□□ -1.32
ERCC1-216ENST00000592444 FAM86C1Q9NVL1 165 aa6.78□□□□□ -1.32
ERCC1-216ENST00000592444 USP16Q9Y5T5 823 aa6.78□□□□□ -1.32
ERCC1-216ENST00000592444 ACACBO00763 2458 aa6.78□□□□□ -1.32
ERCC1-216ENST00000592444 LTBP2Q14767 1821 aa6.78□□□□□ -1.32
ERCC1-216ENST00000592444 UBN2Q6ZU65 1347 aa6.77□□□□□ -1.32
ERCC1-216ENST00000592444 ALADP13716 330 aa6.77□□□□□ -1.33
ERCC1-216ENST00000592444 SLC19A1P41440 591 aa6.77□□□□□ -1.33
ERCC1-216ENST00000592444 GRAPQ13588 217 aa6.77□□□□□ -1.33
ERCC1-216ENST00000592444 ST3GAL2Q16842 350 aa6.77□□□□□ -1.33
ERCC1-216ENST00000592444 SUPT20HL1Q3ZLR7 823 aa6.77□□□□□ -1.33
ERCC1-216ENST00000592444 NBPF12Q5TAG4 269 aaPredicted RBP6.77□□□□□ -1.33
ERCC1-216ENST00000592444 RIC3Q7Z5B4 369 aa6.77□□□□□ -1.33
ERCC1-216ENST00000592444 GRAPLQ8TC17 118 aaPredicted RBP6.77□□□□□ -1.33
ERCC1-216ENST00000592444 PUS7Q96PZ0 661 aaKnown RBP6.77□□□□□ -1.33
ERCC1-216ENST00000592444 ZC3H12CQ9C0D7 883 aaKnown RBP6.77□□□□□ -1.33
ERCC1-216ENST00000592444 POLKQ9UBT6 870 aa6.77□□□□□ -1.33
ERCC1-216ENST00000592444 ROCK2O75116 1388 aaKnown RBP6.77□□□□□ -1.33
ERCC1-216ENST00000592444 CHD7Q9P2D1 2997 aa6.77□□□□□ -1.33
ERCC1-216ENST00000592444 MAST4O15021 2626 aa6.77□□□□□ -1.33
ERCC1-216ENST00000592444 FLNBO75369 2602 aaKnown RBP6.76□□□□□ -1.33
ERCC1-216ENST00000592444 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.76□□□□□ -1.33
ERCC1-216ENST00000592444 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.76□□□□□ -1.33
ERCC1-216ENST00000592444 NTSR2O95665 410 aa6.76□□□□□ -1.33
ERCC1-216ENST00000592444 CETPP11597 493 aa6.76□□□□□ -1.33
ERCC1-216ENST00000592444 GPSM2P81274 684 aa6.76□□□□□ -1.33
ERCC1-216ENST00000592444 IRF5Q13568 498 aa6.76□□□□□ -1.33
ERCC1-216ENST00000592444 HFE2Q6ZVN8 426 aa6.76□□□□□ -1.33
ERCC1-216ENST00000592444 DDX46Q7L014 1031 aaKnown RBP6.76□□□□□ -1.33
ERCC1-216ENST00000592444 OGFOD1Q8N543 542 aa6.76□□□□□ -1.33
ERCC1-216ENST00000592444 FMNL2Q96PY5 1086 aa6.76□□□□□ -1.33
ERCC1-216ENST00000592444 MXD3Q9BW11 206 aa6.76□□□□□ -1.33
ERCC1-216ENST00000592444 HMX1Q9NP08 348 aaPredicted RBP6.76□□□□□ -1.33
ERCC1-216ENST00000592444 PCDHB3Q9Y5E6 796 aa6.76□□□□□ -1.33
ERCC1-216ENST00000592444 ADGRG1Q9Y653 693 aa6.76□□□□□ -1.33
ERCC1-216ENST00000592444 KIF20BQ96Q89 1820 aa6.76□□□□□ -1.33
ERCC1-216ENST00000592444 MGAMO43451 1857 aa6.75□□□□□ -1.33
ERCC1-216ENST00000592444 COL1A1P02452 1464 aaPredicted RBP6.75□□□□□ -1.33
ERCC1-216ENST00000592444 IBTKQ9P2D0 1353 aaPredicted RBP6.75□□□□□ -1.33
ERCC1-216ENST00000592444 USP17L3A6NCW0 530 aa6.75□□□□□ -1.33
ERCC1-216ENST00000592444 USP17L4A6NCW7 530 aa6.75□□□□□ -1.33
ERCC1-216ENST00000592444 TCF15Q12870 199 aa6.75□□□□□ -1.33
ERCC1-216ENST00000592444 TRIM32Q13049 653 aa6.75□□□□□ -1.33
ERCC1-216ENST00000592444 NBPF10Q6P3W6 841 aaKnown RBP6.75□□□□□ -1.33
ERCC1-216ENST00000592444 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.75□□□□□ -1.33
ERCC1-216ENST00000592444 USP17L1Q7RTZ2 530 aa6.75□□□□□ -1.33
ERCC1-216ENST00000592444 MTMR14Q8NCE2 650 aa6.75□□□□□ -1.33
ERCC1-216ENST00000592444 TBC1D16Q8TBP0 767 aa6.75□□□□□ -1.33
ERCC1-216ENST00000592444 MFSD14AQ96MC6 490 aa6.75□□□□□ -1.33
ERCC1-216ENST00000592444 TMEM134Q9H6X4 195 aa6.75□□□□□ -1.33
ERCC1-216ENST00000592444 OTOFQ9HC10 1997 aa6.75□□□□□ -1.33
ERCC1-216ENST00000592444 TRIOO75962 3097 aa6.75□□□□□ -1.33
ERCC1-216ENST00000592444 SLC10A5Q5PT55 438 aa6.74□□□□□ -1.33
ERCC1-216ENST00000592444 SULT6B1Q6IMI4 303 aa6.74□□□□□ -1.33
ERCC1-216ENST00000592444 ASCL5Q7RTU5 278 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms