RNA–Protein interactions for RNA: ENST00000590638.5

NEDD4L-230, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-230ENST00000590638 ELOA3DA6NLF2 546 aaPredicted RBP10.59□□□□□ -0.71
NEDD4L-230ENST00000590638 ELOA3BQ3SY89 546 aa10.59□□□□□ -0.71
NEDD4L-230ENST00000590638 ELOA3Q8NG57 546 aa10.59□□□□□ -0.71
NEDD4L-230ENST00000590638 NXPE3Q969Y0 559 aa10.59□□□□□ -0.71
NEDD4L-230ENST00000590638 HHIPQ96QV1 700 aa10.59□□□□□ -0.71
NEDD4L-230ENST00000590638 BHLHE41Q9C0J9 482 aaPredicted RBP10.59□□□□□ -0.71
NEDD4L-230ENST00000590638 KLF15Q9UIH9 416 aa10.59□□□□□ -0.71
NEDD4L-230ENST00000590638 GGT7Q9UJ14 662 aa10.59□□□□□ -0.71
NEDD4L-230ENST00000590638 PPM1HQ9ULR3 514 aa10.59□□□□□ -0.71
NEDD4L-230ENST00000590638 SETD1BQ9UPS6 1966 aaKnown RBP10.59□□□□□ -0.71
NEDD4L-230ENST00000590638 KIF7Q2M1P5 1343 aa10.58□□□□□ -0.71
NEDD4L-230ENST00000590638 A0A096LPE4 126 aa10.58□□□□□ -0.72
NEDD4L-230ENST00000590638 A0A1W2PPZ6 126 aa10.58□□□□□ -0.72
NEDD4L-230ENST00000590638 GRIA4P48058 902 aa10.58□□□□□ -0.72
NEDD4L-230ENST00000590638 PERM1Q5SV97 790 aa10.58□□□□□ -0.72
NEDD4L-230ENST00000590638 FCHSD1Q86WN1 690 aa10.58□□□□□ -0.72
NEDD4L-230ENST00000590638 METTL12A8MUP2 240 aa10.57□□□□□ -0.72
NEDD4L-230ENST00000590638 PTPRAP18433 802 aa10.57□□□□□ -0.72
NEDD4L-230ENST00000590638 TMF1P82094 1093 aa10.57□□□□□ -0.72
NEDD4L-230ENST00000590638 SRSF11Q05519 484 aaKnown RBP10.57□□□□□ -0.72
NEDD4L-230ENST00000590638 CCDC85BQ15834 202 aaPredicted RBP10.57□□□□□ -0.72
NEDD4L-230ENST00000590638 SPRED3Q2MJR0 410 aa10.57□□□□□ -0.72
NEDD4L-230ENST00000590638 RNFT1Q5M7Z0 435 aa10.57□□□□□ -0.72
NEDD4L-230ENST00000590638 PSAPL1Q6NUJ1 521 aa10.57□□□□□ -0.72
NEDD4L-230ENST00000590638 C3orf58Q8NDZ4 430 aa10.57□□□□□ -0.72
NEDD4L-230ENST00000590638 CCSER2Q9H7U1 834 aa10.57□□□□□ -0.72
NEDD4L-230ENST00000590638 ADGRB1O14514 1584 aa10.56□□□□□ -0.72
NEDD4L-230ENST00000590638 TMEM2Q9UHN6 1383 aa10.56□□□□□ -0.72
NEDD4L-230ENST00000590638 MYO3AQ8NEV4 1616 aa10.56□□□□□ -0.72
NEDD4L-230ENST00000590638 NFKBIEO00221 500 aa10.56□□□□□ -0.72
NEDD4L-230ENST00000590638 RGS9O75916 674 aaPredicted RBP10.56□□□□□ -0.72
NEDD4L-230ENST00000590638 ZC3H6P61129 1189 aaKnown RBP10.56□□□□□ -0.72
NEDD4L-230ENST00000590638 NFX1Q12986 1120 aaKnown RBP10.56□□□□□ -0.72
NEDD4L-230ENST00000590638 SLCO4C1Q6ZQN7 724 aa10.56□□□□□ -0.72
NEDD4L-230ENST00000590638 THEMISQ8N1K5 641 aaPredicted RBP10.56□□□□□ -0.72
NEDD4L-230ENST00000590638 TESK2Q96S53 571 aa10.56□□□□□ -0.72
NEDD4L-230ENST00000590638 POP1Q99575 1024 aaKnown RBP10.56□□□□□ -0.72
NEDD4L-230ENST00000590638 CEP44Q9C0F1 390 aa10.56□□□□□ -0.72
NEDD4L-230ENST00000590638 LACRTQ9GZZ8 138 aa10.56□□□□□ -0.72
NEDD4L-230ENST00000590638 NAGPAQ9UK23 515 aa10.56□□□□□ -0.72
NEDD4L-230ENST00000590638 ERBB4Q15303 1308 aa10.56□□□□□ -0.72
NEDD4L-230ENST00000590638 ALKQ9UM73 1620 aa10.55□□□□□ -0.72
NEDD4L-230ENST00000590638 PTPN12Q05209 780 aaKnown RBP10.55□□□□□ -0.72
NEDD4L-230ENST00000590638 GDF6Q6KF10 455 aaPredicted RBP10.55□□□□□ -0.72
NEDD4L-230ENST00000590638 TPTE2Q6XPS3 522 aa10.55□□□□□ -0.72
NEDD4L-230ENST00000590638 METTL16Q86W50 562 aaKnown RBP10.55□□□□□ -0.72
NEDD4L-230ENST00000590638 BSNDQ8WZ55 320 aa10.55□□□□□ -0.72
NEDD4L-230ENST00000590638 FRRS1LQ9P0K9 344 aa10.55□□□□□ -0.72
NEDD4L-230ENST00000590638 GPN3Q9UHW5 284 aaPredicted RBP10.55□□□□□ -0.72
NEDD4L-230ENST00000590638 SLIT1O75093 1534 aa10.54□□□□□ -0.72
NEDD4L-230ENST00000590638 FBXO24O75426 580 aa10.54□□□□□ -0.72
NEDD4L-230ENST00000590638 ITPKAP23677 461 aa10.54□□□□□ -0.72
NEDD4L-230ENST00000590638 HSPA2P54652 639 aa10.54□□□□□ -0.72
NEDD4L-230ENST00000590638 CABP4P57796 275 aa10.54□□□□□ -0.72
NEDD4L-230ENST00000590638 TMEM132EQ6IEE7 984 aa10.54□□□□□ -0.72
NEDD4L-230ENST00000590638 USP48Q86UV5 1035 aa10.54□□□□□ -0.72
NEDD4L-230ENST00000590638 NUDT8Q8WV74 236 aa10.54□□□□□ -0.72
NEDD4L-230ENST00000590638 EID1Q9Y6B2 187 aa10.54□□□□□ -0.72
NEDD4L-230ENST00000590638 CEP170BQ9Y4F5 1589 aaPredicted RBP10.53□□□□□ -0.72
NEDD4L-230ENST00000590638 ADAMTS2O95450 1211 aa10.53□□□□□ -0.72
NEDD4L-230ENST00000590638 LPIN3Q9BQK8 851 aa10.53□□□□□ -0.72
NEDD4L-230ENST00000590638 POLR3GLQ9BT43 218 aa10.53□□□□□ -0.72
NEDD4L-230ENST00000590638 NOC4LQ9BVI4 516 aaKnown RBP10.53□□□□□ -0.72
NEDD4L-230ENST00000590638 TGIF2Q9GZN2 237 aa10.53□□□□□ -0.72
NEDD4L-230ENST00000590638 JPH1Q9HDC5 661 aaPredicted RBP10.53□□□□□ -0.72
NEDD4L-230ENST00000590638 TRIM33Q9UPN9 1127 aa10.53□□□□□ -0.72
NEDD4L-230ENST00000590638 ARHGAP23Q9P227 1491 aa10.53□□□□□ -0.72
NEDD4L-230ENST00000590638 ZNF142P52746 1687 aaPredicted RBP10.53□□□□□ -0.72
NEDD4L-230ENST00000590638 CENPJQ9HC77 1338 aaPredicted RBP10.53□□□□□ -0.72
NEDD4L-230ENST00000590638 SBNO2Q9Y2G9 1366 aa10.52□□□□□ -0.72
NEDD4L-230ENST00000590638 ANP32CO43423 234 aa10.52□□□□□ -0.73
NEDD4L-230ENST00000590638 EPXP11678 715 aa10.52□□□□□ -0.73
NEDD4L-230ENST00000590638 RLBP1P12271 317 aa10.52□□□□□ -0.73
NEDD4L-230ENST00000590638 PWP1Q13610 501 aa10.52□□□□□ -0.73
NEDD4L-230ENST00000590638 RPS26P11Q5JNZ5 115 aaPredicted RBP10.52□□□□□ -0.73
NEDD4L-230ENST00000590638 SV2BQ7L1I2 683 aa10.52□□□□□ -0.73
NEDD4L-230ENST00000590638 RELL1Q8IUW5 271 aa10.52□□□□□ -0.73
NEDD4L-230ENST00000590638 MUC3BQ9H195 1237 aa10.52□□□□□ -0.73
NEDD4L-230ENST00000590638 CLEC4MQ9H2X3 399 aaPredicted RBP10.52□□□□□ -0.73
NEDD4L-230ENST00000590638 ZNF576Q9H609 170 aa10.52□□□□□ -0.73
NEDD4L-230ENST00000590638 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.52□□□□□ -0.73
NEDD4L-230ENST00000590638 SETD1AO15047 1707 aaKnown RBP10.52□□□□□ -0.73
NEDD4L-230ENST00000590638 ARHGEF28Q8N1W1 1705 aaKnown RBP10.52□□□□□ -0.73
NEDD4L-230ENST00000590638 PLEKHG1Q9ULL1 1385 aa10.52□□□□□ -0.73
NEDD4L-230ENST00000590638 QRICH2Q9H0J4 1663 aa10.51□□□□□ -0.73
NEDD4L-230ENST00000590638 AMPD1P23109 780 aa10.51□□□□□ -0.73
NEDD4L-230ENST00000590638 CDC27P30260 824 aa10.51□□□□□ -0.73
NEDD4L-230ENST00000590638 PPP2R3AQ06190 1150 aa10.51□□□□□ -0.73
NEDD4L-230ENST00000590638 ZNF654Q8IZM8 581 aa10.51□□□□□ -0.73
NEDD4L-230ENST00000590638 CACTIN-AS1Q8N1I8 211 aa10.51□□□□□ -0.73
NEDD4L-230ENST00000590638 GALNT6Q8NCL4 622 aa10.51□□□□□ -0.73
NEDD4L-230ENST00000590638 C8orf37Q96NL8 207 aa10.51□□□□□ -0.73
NEDD4L-230ENST00000590638 ASXL1Q8IXJ9 1541 aa10.51□□□□□ -0.73
NEDD4L-230ENST00000590638 NRXN3Q9Y4C0 1643 aa10.51□□□□□ -0.73
NEDD4L-230ENST00000590638 YTHDC2Q9H6S0 1430 aaKnown RBP10.5□□□□□ -0.73
NEDD4L-230ENST00000590638 LMNB1P20700 586 aa10.5□□□□□ -0.73
NEDD4L-230ENST00000590638 LTKP29376 864 aa10.5□□□□□ -0.73
NEDD4L-230ENST00000590638 GNL2Q13823 731 aaKnown RBP10.5□□□□□ -0.73
NEDD4L-230ENST00000590638 MAP3K11Q16584 847 aa10.5□□□□□ -0.73
NEDD4L-230ENST00000590638 ZNF394Q53GI3 561 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms