RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 MS4A1P11836 297 aa13.88□□□□□ -0.19
SMAD4-211ENST00000590499 ADORA1P30542 326 aa13.88□□□□□ -0.19
SMAD4-211ENST00000590499 PPP4CP60510 307 aa13.88□□□□□ -0.19
SMAD4-211ENST00000590499 TFCP2Q12800 502 aa13.88□□□□□ -0.19
SMAD4-211ENST00000590499 CHAF1AQ13111 956 aaPredicted RBP13.88□□□□□ -0.19
SMAD4-211ENST00000590499 MVPQ14764 893 aaKnown RBP13.88□□□□□ -0.19
SMAD4-211ENST00000590499 DLGAP5Q15398 846 aa13.88□□□□□ -0.19
SMAD4-211ENST00000590499 CFAP100Q494V2 611 aa13.88□□□□□ -0.19
SMAD4-211ENST00000590499 TBC1D22AQ8WUA7 517 aa13.88□□□□□ -0.19
SMAD4-211ENST00000590499 TSKSQ9UJT2 592 aa13.88□□□□□ -0.19
SMAD4-211ENST00000590499 TTF2Q9UNY4 1162 aaKnown RBP13.88□□□□□ -0.19
SMAD4-211ENST00000590499 SCAF8Q9UPN6 1271 aaKnown RBP13.88□□□□□ -0.19
SMAD4-211ENST00000590499 PHKA1P46020 1223 aa13.87□□□□□ -0.19
SMAD4-211ENST00000590499 CEP85Q6P2H3 762 aa13.87□□□□□ -0.19
SMAD4-211ENST00000590499 PRMT6Q96LA8 375 aaPredicted RBP13.87□□□□□ -0.19
SMAD4-211ENST00000590499 GBA2Q9HCG7 927 aaPredicted RBP13.87□□□□□ -0.19
SMAD4-211ENST00000590499 SERPINA10Q9UK55 444 aa13.87□□□□□ -0.19
SMAD4-211ENST00000590499 WDR33Q9C0J8 1336 aaKnown RBP13.87□□□□□ -0.19
SMAD4-211ENST00000590499 A0A1B0GUL7 405 aa13.86□□□□□ -0.19
SMAD4-211ENST00000590499 FRAT2O75474 233 aaPredicted RBP13.86□□□□□ -0.19
SMAD4-211ENST00000590499 TIMM10P62072 90 aa13.86□□□□□ -0.19
SMAD4-211ENST00000590499 CCDC102BQ68D86 513 aa13.86□□□□□ -0.19
SMAD4-211ENST00000590499 CYP4F22Q6NT55 531 aa13.86□□□□□ -0.19
SMAD4-211ENST00000590499 PACS2Q86VP3 889 aa13.86□□□□□ -0.19
SMAD4-211ENST00000590499 APOBEC3FQ8IUX4 373 aaKnown RBP13.86□□□□□ -0.19
SMAD4-211ENST00000590499 CAPNS2Q96L46 248 aa13.86□□□□□ -0.19
SMAD4-211ENST00000590499 CDHR5Q9HBB8 845 aa13.86□□□□□ -0.19
SMAD4-211ENST00000590499 AKAP2Q9Y2D5 859 aa13.86□□□□□ -0.19
SMAD4-211ENST00000590499 NOP58Q9Y2X3 529 aaKnown RBP13.86□□□□□ -0.19
SMAD4-211ENST00000590499 SUGT1Q9Y2Z0 365 aa13.86□□□□□ -0.19
SMAD4-211ENST00000590499 SEMA3EO15041 775 aa13.85□□□□□ -0.19
SMAD4-211ENST00000590499 ECE1P42892 770 aa13.85□□□□□ -0.19
SMAD4-211ENST00000590499 CRKP46108 304 aa13.85□□□□□ -0.19
SMAD4-211ENST00000590499 PRSS12P56730 875 aa13.85□□□□□ -0.19
SMAD4-211ENST00000590499 HUNKP57058 714 aa13.85□□□□□ -0.19
SMAD4-211ENST00000590499 HDLBPQ00341 1268 aaKnown RBP13.85□□□□□ -0.19
SMAD4-211ENST00000590499 G3BP1Q13283 466 aaKnown RBP eCLIP13.85□□□□□ -0.19
SMAD4-211ENST00000590499 PPP1R18Q6NYC8 613 aa13.85□□□□□ -0.19
SMAD4-211ENST00000590499 WDR66Q8TBY9 1149 aa13.85□□□□□ -0.19
SMAD4-211ENST00000590499 XAGE2Q96GT9 111 aa13.85□□□□□ -0.19
SMAD4-211ENST00000590499 ZBTB40Q9NUA8 1239 aa13.85□□□□□ -0.19
SMAD4-211ENST00000590499 DDX19BQ9UMR2 479 aa13.85□□□□□ -0.19
SMAD4-211ENST00000590499 COG6Q9Y2V7 657 aa13.85□□□□□ -0.19
SMAD4-211ENST00000590499 V9GY48 417 aaPredicted RBP13.85□□□□□ -0.19
SMAD4-211ENST00000590499 PDS5AQ29RF7 1337 aaKnown RBP13.85□□□□□ -0.19
SMAD4-211ENST00000590499 SALL1Q9NSC2 1324 aa13.85□□□□□ -0.19
SMAD4-211ENST00000590499 SSC5DA1L4H1 1573 aa13.84□□□□□ -0.19
SMAD4-211ENST00000590499 HSPA1AP0DMV8 641 aaKnown RBP13.84□□□□□ -0.19
SMAD4-211ENST00000590499 HSPA1BP0DMV9 641 aaKnown RBP13.84□□□□□ -0.19
SMAD4-211ENST00000590499 MLLT3P42568 568 aaPredicted RBP13.84□□□□□ -0.19
SMAD4-211ENST00000590499 FKBP1BP68106 108 aa13.84□□□□□ -0.19
SMAD4-211ENST00000590499 RASGRF1Q13972 1273 aa13.84□□□□□ -0.19
SMAD4-211ENST00000590499 PDE3AQ14432 1141 aa13.84□□□□□ -0.19
SMAD4-211ENST00000590499 C20orf194Q5TEA3 1177 aa13.84□□□□□ -0.19
SMAD4-211ENST00000590499 PRAMEF18Q5VWM3 479 aa13.84□□□□□ -0.19
SMAD4-211ENST00000590499 C2orf69Q8N8R5 385 aa13.84□□□□□ -0.19
SMAD4-211ENST00000590499 MRIQ9BWK5 157 aa13.84□□□□□ -0.19
SMAD4-211ENST00000590499 GNL3LQ9NVN8 582 aaKnown RBP13.84□□□□□ -0.19
SMAD4-211ENST00000590499 DENND2AQ9ULE3 1009 aa13.84□□□□□ -0.19
SMAD4-211ENST00000590499 CLRN2A0PK11 232 aa13.83□□□□□ -0.2
SMAD4-211ENST00000590499 MYO1BO43795 1136 aa13.83□□□□□ -0.2
SMAD4-211ENST00000590499 SURF6O75683 361 aaKnown RBP13.83□□□□□ -0.2
SMAD4-211ENST00000590499 DEFB129Q9H1M3 183 aa13.83□□□□□ -0.2
SMAD4-211ENST00000590499 GPR108Q9NPR9 543 aa13.83□□□□□ -0.2
SMAD4-211ENST00000590499 PPP2R3BQ9Y5P8 575 aa13.83□□□□□ -0.2
SMAD4-211ENST00000590499 AKAP11Q9UKA4 1901 aa13.83□□□□□ -0.2
SMAD4-211ENST00000590499 MAST3O60307 1309 aa13.83□□□□□ -0.2
SMAD4-211ENST00000590499 MYH2Q9UKX2 1941 aa13.82□□□□□ -0.2
SMAD4-211ENST00000590499 FAM155AB1AL88 458 aaPredicted RBP13.82□□□□□ -0.2
SMAD4-211ENST00000590499 PRDX5P30044 214 aa13.82□□□□□ -0.2
SMAD4-211ENST00000590499 RBM5P52756 815 aaKnown RBP eCLIP13.82□□□□□ -0.2
SMAD4-211ENST00000590499 TNNI3KQ59H18 835 aa13.82□□□□□ -0.2
SMAD4-211ENST00000590499 RGMBQ6NW40 437 aa13.82□□□□□ -0.2
SMAD4-211ENST00000590499 HHIPL2Q6UWX4 724 aa13.82□□□□□ -0.2
SMAD4-211ENST00000590499 TEKT1Q969V4 418 aa13.82□□□□□ -0.2
SMAD4-211ENST00000590499 ZDHHC15Q96MV8 337 aa13.82□□□□□ -0.2
SMAD4-211ENST00000590499 MTRQ99707 1265 aa13.82□□□□□ -0.2
SMAD4-211ENST00000590499 TDRD3Q9H7E2 651 aaKnown RBP13.82□□□□□ -0.2
SMAD4-211ENST00000590499 ZNF70Q9UC06 446 aaPredicted RBP13.82□□□□□ -0.2
SMAD4-211ENST00000590499 FPGT-TNNI3KV9GXZ4 949 aa13.82□□□□□ -0.2
SMAD4-211ENST00000590499 AOC2O75106 756 aa13.81□□□□□ -0.2
SMAD4-211ENST00000590499 ARID4AP29374 1257 aaPredicted RBP13.81□□□□□ -0.2
SMAD4-211ENST00000590499 MAP2K2P36507 400 aa13.81□□□□□ -0.2
SMAD4-211ENST00000590499 ZNF787Q6DD87 383 aa13.81□□□□□ -0.2
SMAD4-211ENST00000590499 APOBEC3HQ6NTF7 200 aaKnown RBP13.81□□□□□ -0.2
SMAD4-211ENST00000590499 MOB2Q70IA6 237 aa13.81□□□□□ -0.2
SMAD4-211ENST00000590499 SIRT2Q8IXJ6 389 aa13.81□□□□□ -0.2
SMAD4-211ENST00000590499 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.81□□□□□ -0.2
SMAD4-211ENST00000590499 NEUROD6Q96NK8 337 aa13.81□□□□□ -0.2
SMAD4-211ENST00000590499 VEZTQ9HBM0 779 aa13.81□□□□□ -0.2
SMAD4-211ENST00000590499 FAM198AQ9UFP1 575 aa13.81□□□□□ -0.2
SMAD4-211ENST00000590499 GRM1Q13255 1194 aa13.8□□□□□ -0.2
SMAD4-211ENST00000590499 OS9Q13438 667 aaPredicted RBP13.8□□□□□ -0.2
SMAD4-211ENST00000590499 RASA3Q14644 834 aa13.8□□□□□ -0.2
SMAD4-211ENST00000590499 RPAP2Q8IXW5 612 aaPredicted RBP13.8□□□□□ -0.2
SMAD4-211ENST00000590499 IL21Q9HBE4 155 aa13.8□□□□□ -0.2
SMAD4-211ENST00000590499 OTOFQ9HC10 1997 aa13.8□□□□□ -0.2
SMAD4-211ENST00000590499 FOXN1O15353 648 aa13.79□□□□□ -0.2
SMAD4-211ENST00000590499 LDHBP07195 334 aaKnown RBP13.79□□□□□ -0.2
SMAD4-211ENST00000590499 SLC10A3P09131 477 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms