RNA–Protein interactions for RNA: ENST00000590060.5

POLR2E-207, Transcript of RNA polymerase II subunit E, humanhuman

TSL 5

Gene POLR2E, Length 1,052 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-207ENST00000590060 USP17L12C9JPN9 530 aa22.69■■□□□ 1.22
POLR2E-207ENST00000590060 USP17L21D6R901 530 aa22.69■■□□□ 1.22
POLR2E-207ENST00000590060 PDE4BQ07343 736 aa22.69■■□□□ 1.22
POLR2E-207ENST00000590060 RRP12Q5JTH9 1297 aaKnown RBP22.69■■□□□ 1.22
POLR2E-207ENST00000590060 CTR9Q6PD62 1173 aa22.69■■□□□ 1.22
POLR2E-207ENST00000590060 CCDC83Q8IWF9 413 aa22.69■■□□□ 1.22
POLR2E-207ENST00000590060 JDP2Q8WYK2 163 aa22.69■■□□□ 1.22
POLR2E-207ENST00000590060 AGXT2Q9BYV1 514 aa22.69■■□□□ 1.22
POLR2E-207ENST00000590060 ZNF287Q9HBT7 754 aa22.69■■□□□ 1.22
POLR2E-207ENST00000590060 HDAC9Q9UKV0 1011 aa22.69■■□□□ 1.22
POLR2E-207ENST00000590060 SMC3Q9UQE7 1217 aa22.69■■□□□ 1.22
POLR2E-207ENST00000590060 LTBP3Q9NS15 1303 aa22.68■■□□□ 1.22
POLR2E-207ENST00000590060 POLR3DP05423 398 aaPredicted RBP22.68■■□□□ 1.22
POLR2E-207ENST00000590060 CRKP46108 304 aa22.68■■□□□ 1.22
POLR2E-207ENST00000590060 ME3Q16798 604 aa22.68■■□□□ 1.22
POLR2E-207ENST00000590060 TGFBRAP1Q8WUH2 860 aa22.68■■□□□ 1.22
POLR2E-207ENST00000590060 LRRC2Q9BYS8 371 aa22.68■■□□□ 1.22
POLR2E-207ENST00000590060 ZNRF3Q9ULT6 936 aa22.68■■□□□ 1.22
POLR2E-207ENST00000590060 NAP1L2Q9ULW6 460 aaPredicted RBP22.68■■□□□ 1.22
POLR2E-207ENST00000590060 DDIT3P35638 169 aa22.67■■□□□ 1.22
POLR2E-207ENST00000590060 KIAA0825Q8IV33 1275 aa22.67■■□□□ 1.22
POLR2E-207ENST00000590060 UBAC1Q9BSL1 405 aa22.67■■□□□ 1.22
POLR2E-207ENST00000590060 SERPINA10Q9UK55 444 aa22.67■■□□□ 1.22
POLR2E-207ENST00000590060 ANGEL1Q9UNK9 670 aaKnown RBP22.67■■□□□ 1.22
POLR2E-207ENST00000590060 KDM4AO75164 1064 aa22.66■■□□□ 1.22
POLR2E-207ENST00000590060 SCNN1DP51172 638 aa22.66■■□□□ 1.22
POLR2E-207ENST00000590060 RBM5P52756 815 aaKnown RBP eCLIP22.66■■□□□ 1.22
POLR2E-207ENST00000590060 RSBN1LQ6PCB5 846 aaPredicted RBP22.66■■□□□ 1.22
POLR2E-207ENST00000590060 MAPKAPK5Q8IW41 473 aa22.66■■□□□ 1.22
POLR2E-207ENST00000590060 ZNF274Q96GC6 653 aaPredicted RBP22.66■■□□□ 1.22
POLR2E-207ENST00000590060 ZDHHC15Q96MV8 337 aa22.66■■□□□ 1.22
POLR2E-207ENST00000590060 LARP6Q9BRS8 491 aaKnown RBP22.66■■□□□ 1.22
POLR2E-207ENST00000590060 MXD3Q9BW11 206 aa22.66■■□□□ 1.22
POLR2E-207ENST00000590060 PSME4Q14997 1843 aa22.66■■□□□ 1.22
POLR2E-207ENST00000590060 ROBO3Q96MS0 1386 aa22.65■■□□□ 1.22
POLR2E-207ENST00000590060 FLT1P17948 1338 aa22.65■■□□□ 1.22
POLR2E-207ENST00000590060 LARGE1O95461 756 aa22.65■■□□□ 1.22
POLR2E-207ENST00000590060 PDIA4P13667 645 aaKnown RBP22.65■■□□□ 1.22
POLR2E-207ENST00000590060 RHBDL3P58872 404 aa22.65■■□□□ 1.22
POLR2E-207ENST00000590060 TMEM67Q5HYA8 995 aa22.65■■□□□ 1.22
POLR2E-207ENST00000590060 CHST3Q7LGC8 479 aa22.65■■□□□ 1.22
POLR2E-207ENST00000590060 GTF3C6Q969F1 213 aa22.65■■□□□ 1.22
POLR2E-207ENST00000590060 KIF3AQ9Y496 699 aa22.65■■□□□ 1.22
POLR2E-207ENST00000590060 FER1L6Q2WGJ9 1857 aa22.64■■□□□ 1.22
POLR2E-207ENST00000590060 YDJCA8MPS7 323 aa22.64■■□□□ 1.21
POLR2E-207ENST00000590060 SH2B2O14492 632 aaPredicted RBP22.64■■□□□ 1.21
POLR2E-207ENST00000590060 IFIT3O14879 490 aaKnown RBP22.64■■□□□ 1.21
POLR2E-207ENST00000590060 ORC4O43929 436 aa22.64■■□□□ 1.21
POLR2E-207ENST00000590060 DHX16O60231 1041 aaKnown RBP22.64■■□□□ 1.21
POLR2E-207ENST00000590060 ANTXR2P58335 489 aa22.64■■□□□ 1.21
POLR2E-207ENST00000590060 APOBRQ0VD83 1088 aa22.64■■□□□ 1.21
POLR2E-207ENST00000590060 SYNE3Q6ZMZ3 975 aa22.64■■□□□ 1.21
POLR2E-207ENST00000590060 NFXL1Q6ZNB6 911 aa22.64■■□□□ 1.21
POLR2E-207ENST00000590060 IQCA1Q86XH1 822 aa22.64■■□□□ 1.21
POLR2E-207ENST00000590060 USP40Q9NVE5 1235 aa22.64■■□□□ 1.21
POLR2E-207ENST00000590060 KLF18A0A0U1RQI7 1052 aa22.63■■□□□ 1.21
POLR2E-207ENST00000590060 GOLGA8BA8MQT2 603 aa22.63■■□□□ 1.21
POLR2E-207ENST00000590060 PFKFB2O60825 505 aa22.63■■□□□ 1.21
POLR2E-207ENST00000590060 STK3Q13188 491 aa22.63■■□□□ 1.21
POLR2E-207ENST00000590060 C12orf60Q5U649 245 aa22.63■■□□□ 1.21
POLR2E-207ENST00000590060 TMTC2Q8N394 836 aa22.63■■□□□ 1.21
POLR2E-207ENST00000590060 OGFOD1Q8N543 542 aa22.63■■□□□ 1.21
POLR2E-207ENST00000590060 LLPHQ9BRT6 129 aaKnown RBP22.63■■□□□ 1.21
POLR2E-207ENST00000590060 KCNQ5Q9NR82 932 aa22.63■■□□□ 1.21
POLR2E-207ENST00000590060 MKRN1Q9UHC7 482 aaKnown RBP22.63■■□□□ 1.21
POLR2E-207ENST00000590060 SCN9AQ15858 1988 aa22.63■■□□□ 1.21
POLR2E-207ENST00000590060 BAZ2AQ9UIF9 1905 aaKnown RBP22.63■■□□□ 1.21
POLR2E-207ENST00000590060 ARFGEF1Q9Y6D6 1849 aa22.62■■□□□ 1.21
POLR2E-207ENST00000590060 CCDC69A6NI79 296 aa22.62■■□□□ 1.21
POLR2E-207ENST00000590060 RANBP6O60518 1105 aaKnown RBP22.62■■□□□ 1.21
POLR2E-207ENST00000590060 VIL1P09327 827 aaKnown RBP22.62■■□□□ 1.21
POLR2E-207ENST00000590060 USP17L8P0C7I0 530 aa22.62■■□□□ 1.21
POLR2E-207ENST00000590060 MMP14P50281 582 aa22.62■■□□□ 1.21
POLR2E-207ENST00000590060 EVCP57679 992 aa22.62■■□□□ 1.21
POLR2E-207ENST00000590060 COL9A3Q14050 684 aaPredicted RBP22.62■■□□□ 1.21
POLR2E-207ENST00000590060 TNIP1Q15025 636 aa22.62■■□□□ 1.21
POLR2E-207ENST00000590060 CYB5R4Q7L1T6 521 aa22.62■■□□□ 1.21
POLR2E-207ENST00000590060 TTC6Q86TZ1 520 aa22.62■■□□□ 1.21
POLR2E-207ENST00000590060 STK11IPQ8N1F8 1099 aa22.62■■□□□ 1.21
POLR2E-207ENST00000590060 NECAB1Q8N987 351 aa22.62■■□□□ 1.21
POLR2E-207ENST00000590060 AGBL3Q8NEM8 1001 aa22.62■■□□□ 1.21
POLR2E-207ENST00000590060 TMOD2Q9NZR1 351 aa22.62■■□□□ 1.21
POLR2E-207ENST00000590060 ZNF646O15015 1829 aaPredicted RBP22.61■■□□□ 1.21
POLR2E-207ENST00000590060 CYP2D7A0A087X1C5 515 aa22.61■■□□□ 1.21
POLR2E-207ENST00000590060 NFKBIEO00221 500 aa22.61■■□□□ 1.21
POLR2E-207ENST00000590060 PSMD14O00487 310 aa22.61■■□□□ 1.21
POLR2E-207ENST00000590060 RAD17O75943 681 aa22.61■■□□□ 1.21
POLR2E-207ENST00000590060 HLA-DOAP06340 250 aa22.61■■□□□ 1.21
POLR2E-207ENST00000590060 FGRP09769 529 aa22.61■■□□□ 1.21
POLR2E-207ENST00000590060 PDCP20941 246 aa22.61■■□□□ 1.21
POLR2E-207ENST00000590060 LIFRP42702 1097 aa22.61■■□□□ 1.21
POLR2E-207ENST00000590060 WTAPQ15007 396 aa22.61■■□□□ 1.21
POLR2E-207ENST00000590060 RAB3GAP1Q15042 981 aa22.61■■□□□ 1.21
POLR2E-207ENST00000590060 CCDC178Q5BJE1 867 aa22.61■■□□□ 1.21
POLR2E-207ENST00000590060 DDX60LQ5H9U9 1706 aaKnown RBP22.61■■□□□ 1.21
POLR2E-207ENST00000590060 CIAPIN1Q6FI81 312 aa22.61■■□□□ 1.21
POLR2E-207ENST00000590060 CPLX2Q6PUV4 134 aaKnown RBP22.61■■□□□ 1.21
POLR2E-207ENST00000590060 NLGN2Q8NFZ4 835 aa22.61■■□□□ 1.21
POLR2E-207ENST00000590060 GBP4Q96PP9 640 aa22.61■■□□□ 1.21
POLR2E-207ENST00000590060 MKNK2Q9HBH9 465 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms