RNA–Protein interactions for RNA: ENST00000590034.2

SF3A2-205, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 3

Gene SF3A2, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-205ENST00000590034 DOCK3Q8IZD9 2030 aa17.3■□□□□ 0.36
SF3A2-205ENST00000590034 MYPNQ86TC9 1320 aa17.3■□□□□ 0.36
SF3A2-205ENST00000590034 DDTLA6NHG4 134 aaPredicted RBP17.3■□□□□ 0.36
SF3A2-205ENST00000590034 H0YGN5 161 aa17.3■□□□□ 0.36
SF3A2-205ENST00000590034 CXCL11O14625 94 aa17.3■□□□□ 0.36
SF3A2-205ENST00000590034 FMNL1O95466 1100 aaPredicted RBP17.3■□□□□ 0.36
SF3A2-205ENST00000590034 PTPRAP18433 802 aa17.3■□□□□ 0.36
SF3A2-205ENST00000590034 SCYL3Q8IZE3 742 aa17.3■□□□□ 0.36
SF3A2-205ENST00000590034 PARK7Q99497 189 aaKnown RBP17.3■□□□□ 0.36
SF3A2-205ENST00000590034 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.3■□□□□ 0.36
SF3A2-205ENST00000590034 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.3■□□□□ 0.36
SF3A2-205ENST00000590034 A0A0G2JLL6 359 aaPredicted RBP17.29■□□□□ 0.36
SF3A2-205ENST00000590034 ENTPD3O75355 529 aa17.29■□□□□ 0.36
SF3A2-205ENST00000590034 GRK4P32298 578 aa17.29■□□□□ 0.36
SF3A2-205ENST00000590034 TIMM10P62072 90 aa17.29■□□□□ 0.36
SF3A2-205ENST00000590034 MAP3K10Q02779 954 aa17.29■□□□□ 0.36
SF3A2-205ENST00000590034 PRKCZQ05513 592 aa17.29■□□□□ 0.36
SF3A2-205ENST00000590034 PRRT2Q7Z6L0 340 aaPredicted RBP17.29■□□□□ 0.36
SF3A2-205ENST00000590034 RAET1EQ8TD07 263 aa17.29■□□□□ 0.36
SF3A2-205ENST00000590034 ZNF384Q8TF68 577 aa17.29■□□□□ 0.36
SF3A2-205ENST00000590034 AFG3L2Q9Y4W6 797 aa17.29■□□□□ 0.36
SF3A2-205ENST00000590034 ZHX2Q9Y6X8 837 aa17.29■□□□□ 0.36
SF3A2-205ENST00000590034 PDS5AQ29RF7 1337 aaKnown RBP17.28■□□□□ 0.36
SF3A2-205ENST00000590034 DZIP1Q86YF9 867 aaKnown RBP17.28■□□□□ 0.36
SF3A2-205ENST00000590034 API5Q9BZZ5 524 aaKnown RBP17.28■□□□□ 0.36
SF3A2-205ENST00000590034 ABCF2Q9UG63 623 aa17.28■□□□□ 0.36
SF3A2-205ENST00000590034 GABRQQ9UN88 632 aa17.28■□□□□ 0.36
SF3A2-205ENST00000590034 ATAD5Q96QE3 1844 aa17.27■□□□□ 0.36
SF3A2-205ENST00000590034 CT47B1P0C2W7 299 aaPredicted RBP17.27■□□□□ 0.36
SF3A2-205ENST00000590034 CCL5P13501 91 aa17.27■□□□□ 0.36
SF3A2-205ENST00000590034 HOXD10P28358 340 aa17.27■□□□□ 0.36
SF3A2-205ENST00000590034 BTDP43251 543 aa17.27■□□□□ 0.36
SF3A2-205ENST00000590034 UBE2Q1Q7Z7E8 422 aa17.27■□□□□ 0.36
SF3A2-205ENST00000590034 CCDC84Q86UT8 332 aaPredicted RBP17.27■□□□□ 0.36
SF3A2-205ENST00000590034 ZGPATQ8N5A5 531 aaKnown RBP17.27■□□□□ 0.36
SF3A2-205ENST00000590034 FAM163AQ96GL9 167 aaPredicted RBP17.27■□□□□ 0.36
SF3A2-205ENST00000590034 PICK1Q9NRD5 415 aa17.27■□□□□ 0.36
SF3A2-205ENST00000590034 MROH7-TTC4A0A0A0MT08 1334 aa17.26■□□□□ 0.35
SF3A2-205ENST00000590034 A0A1B0GUL7 405 aa17.26■□□□□ 0.35
SF3A2-205ENST00000590034 GJA8P48165 433 aa17.26■□□□□ 0.35
SF3A2-205ENST00000590034 FCGRTP55899 365 aa17.26■□□□□ 0.35
SF3A2-205ENST00000590034 RHBDL3P58872 404 aa17.26■□□□□ 0.35
SF3A2-205ENST00000590034 TFCP2Q12800 502 aa17.26■□□□□ 0.35
SF3A2-205ENST00000590034 PICALMQ13492 652 aa17.26■□□□□ 0.35
SF3A2-205ENST00000590034 ZSCAN29Q8IWY8 852 aaPredicted RBP17.26■□□□□ 0.35
SF3A2-205ENST00000590034 XAGE2Q96GT9 111 aa17.26■□□□□ 0.35
SF3A2-205ENST00000590034 LOC285556D6RIA3 1793 aa17.25■□□□□ 0.35
SF3A2-205ENST00000590034 GJB1P08034 283 aa17.25■□□□□ 0.35
SF3A2-205ENST00000590034 MECOMQ03112 1051 aa17.25■□□□□ 0.35
SF3A2-205ENST00000590034 PI16Q6UXB8 463 aa17.25■□□□□ 0.35
SF3A2-205ENST00000590034 GADL1Q6ZQY3 521 aa17.25■□□□□ 0.35
SF3A2-205ENST00000590034 FASTKD5Q7L8L6 764 aaKnown RBP17.25■□□□□ 0.35
SF3A2-205ENST00000590034 SIPA1L1O43166 1804 aa17.24■□□□□ 0.35
SF3A2-205ENST00000590034 GPR75-ASB3A0A0A6YYF3 556 aa17.24■□□□□ 0.35
SF3A2-205ENST00000590034 TRIM75PA6NK02 468 aa17.24■□□□□ 0.35
SF3A2-205ENST00000590034 FAM196BA6NMK8 535 aa17.24■□□□□ 0.35
SF3A2-205ENST00000590034 SRGAP3O43295 1099 aa17.24■□□□□ 0.35
SF3A2-205ENST00000590034 CTNND1O60716 968 aaKnown RBP17.24■□□□□ 0.35
SF3A2-205ENST00000590034 RARSP54136 660 aaKnown RBP17.24■□□□□ 0.35
SF3A2-205ENST00000590034 MTX1Q13505 466 aa17.24■□□□□ 0.35
SF3A2-205ENST00000590034 RNF208Q9H0X6 261 aa17.24■□□□□ 0.35
SF3A2-205ENST00000590034 UNC93B1Q9H1C4 597 aa17.24■□□□□ 0.35
SF3A2-205ENST00000590034 SLC45A1Q9Y2W3 748 aa17.24■□□□□ 0.35
SF3A2-205ENST00000590034 FLT3LGP49771 235 aa17.23■□□□□ 0.35
SF3A2-205ENST00000590034 CHRDL2Q6WN34 429 aa17.23■□□□□ 0.35
SF3A2-205ENST00000590034 SLAIN1Q8ND83 568 aa17.23■□□□□ 0.35
SF3A2-205ENST00000590034 NKX2-3Q8TAU0 364 aa17.23■□□□□ 0.35
SF3A2-205ENST00000590034 HMG20BQ9P0W2 317 aa17.23■□□□□ 0.35
SF3A2-205ENST00000590034 BIN2Q9UBW5 565 aaPredicted RBP17.23■□□□□ 0.35
SF3A2-205ENST00000590034 HDAC5Q9UQL6 1122 aa17.23■□□□□ 0.35
SF3A2-205ENST00000590034 CDK5RAP2Q96SN8 1893 aa17.22■□□□□ 0.35
SF3A2-205ENST00000590034 ELNP15502 786 aa17.22■□□□□ 0.35
SF3A2-205ENST00000590034 MVPQ14764 893 aaKnown RBP17.22■□□□□ 0.35
SF3A2-205ENST00000590034 TREML2Q5T2D2 321 aa17.22■□□□□ 0.35
SF3A2-205ENST00000590034 SPTY2D1Q68D10 685 aaPredicted RBP17.22■□□□□ 0.35
SF3A2-205ENST00000590034 TBC1D9Q6ZT07 1266 aa17.22■□□□□ 0.35
SF3A2-205ENST00000590034 ERICH6Q7L0X2 663 aa17.22■□□□□ 0.35
SF3A2-205ENST00000590034 SLF2Q8IX21 1173 aa17.22■□□□□ 0.35
SF3A2-205ENST00000590034 U2AF1L4Q8WU68 220 aaKnown RBP17.22■□□□□ 0.35
SF3A2-205ENST00000590034 TNNQ9UQP3 1299 aa17.22■□□□□ 0.35
SF3A2-205ENST00000590034 ALPK3Q96L96 1907 aa17.21■□□□□ 0.35
SF3A2-205ENST00000590034 COL2A1P02458 1487 aaPredicted RBP17.21■□□□□ 0.35
SF3A2-205ENST00000590034 ADCY3O60266 1144 aa17.21■□□□□ 0.35
SF3A2-205ENST00000590034 UBXN2AP68543 259 aa17.21■□□□□ 0.35
SF3A2-205ENST00000590034 SMCR8Q8TEV9 937 aaPredicted RBP17.21■□□□□ 0.35
SF3A2-205ENST00000590034 ARHGAP45Q92619 1136 aa17.21■□□□□ 0.35
SF3A2-205ENST00000590034 DPF3Q92784 378 aa17.21■□□□□ 0.35
SF3A2-205ENST00000590034 NSUN4Q96CB9 384 aaKnown RBP17.21■□□□□ 0.35
SF3A2-205ENST00000590034 AGTPBP1Q9UPW5 1226 aa17.21■□□□□ 0.35
SF3A2-205ENST00000590034 AKAP2Q9Y2D5 859 aa17.21■□□□□ 0.35
SF3A2-205ENST00000590034 MYO5AQ9Y4I1 1855 aaKnown RBP17.2■□□□□ 0.34
SF3A2-205ENST00000590034 MAST2Q6P0Q8 1798 aa17.2■□□□□ 0.34
SF3A2-205ENST00000590034 TNPO2O14787 897 aaKnown RBP17.2■□□□□ 0.34
SF3A2-205ENST00000590034 TBC1D12O60347 775 aa17.2■□□□□ 0.34
SF3A2-205ENST00000590034 NPM3O75607 178 aaKnown RBP17.2■□□□□ 0.34
SF3A2-205ENST00000590034 INHAP05111 366 aa17.2■□□□□ 0.34
SF3A2-205ENST00000590034 GNAI3P08754 354 aa17.2■□□□□ 0.34
SF3A2-205ENST00000590034 RRP1BQ14684 758 aaKnown RBP17.2■□□□□ 0.34
SF3A2-205ENST00000590034 ANKRD13CQ8N6S4 541 aa17.2■□□□□ 0.34
SF3A2-205ENST00000590034 SPATA5Q8NB90 893 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms